RNA–Protein interactions for RNA: YKL196C

YKT6, Transcript of Vesicle membrane protein (v-SNARE) with acyltransferase activity, yeast

Gene YKT6, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YKT6	YKL196C	PYC2	P32327	1180 aa	Known RBP	5.07	□□□□□ -1.6
YKT6	YKL196C	TY4B-P	A0A0B7P3V8	1104 aa		5.06	□□□□□ -1.6
YKT6	YKL196C	FUS1	P11710	512 aa		5.06	□□□□□ -1.6
YKT6	YKL196C	MDJ2	P42834	146 aa		5.06	□□□□□ -1.6
YKT6	YKL196C	LSB6	P42951	607 aa		5.06	□□□□□ -1.6
YKT6	YKL196C	ACF4	P47129	309 aa		5.06	□□□□□ -1.6
YKT6	YKL196C	CTR9	P89105	1077 aa		5.06	□□□□□ -1.6
YKT6	YKL196C	MNL2	Q12205	849 aa		5.06	□□□□□ -1.6
YKT6	YKL196C	TY4A-H	Q6Q5P6	413 aa		5.06	□□□□□ -1.6
YKT6	YKL196C	COB	P00163	385 aa		5.05	□□□□□ -1.6
YKT6	YKL196C	SOG2	Q08817	791 aa		5.05	□□□□□ -1.6
YKT6	YKL196C	SLP1	Q12232	587 aa		5.05	□□□□□ -1.6
YKT6	YKL196C	FRT1	Q99332	602 aa		5.05	□□□□□ -1.6
YKT6	YKL196C	AI3	P03877	415 aa		5.04	□□□□□ -1.6
YKT6	YKL196C	PAN5	P38787	379 aa		5.04	□□□□□ -1.6
YKT6	YKL196C	UFD2	P54860	961 aa		5.04	□□□□□ -1.6
YKT6	YKL196C	YPL034W	Q03083	165 aa		5.04	□□□□□ -1.6
YKT6	YKL196C	TRS120	Q04183	1289 aa		5.04	□□□□□ -1.6
YKT6	YKL196C	GLO4	Q12320	285 aa		5.04	□□□□□ -1.6
YKT6	YKL196C	DUR3	P33413	735 aa		5.03	□□□□□ -1.6
YKT6	YKL196C	YJR124C	P47159	448 aa		5.03	□□□□□ -1.6
YKT6	YKL196C	RSC4	Q02206	625 aa		5.03	□□□□□ -1.6
YKT6	YKL196C	SAC7	P17121	654 aa		5.02	□□□□□ -1.61
YKT6	YKL196C	NEO1	P40527	1151 aa		5.02	□□□□□ -1.61
YKT6	YKL196C	GUP1	P53154	560 aa		5.02	□□□□□ -1.61
YKT6	YKL196C	YNR065C	P53751	1116 aa		5.02	□□□□□ -1.61
YKT6	YKL196C	NUT2	Q06213	157 aa		5.02	□□□□□ -1.61
YKT6	YKL196C	GPI13	Q07830	1017 aa		5.02	□□□□□ -1.61
YKT6	YKL196C	TY1A-NL1	Q12391	440 aa	Known RBP	5.02	□□□□□ -1.61
YKT6	YKL196C	HVG1	P0CE11	249 aa		5.01	□□□□□ -1.61
YKT6	YKL196C	YNL011C	P53980	444 aa		5.01	□□□□□ -1.61
YKT6	YKL196C	HAS1	Q03532	505 aa	Known RBP	5.01	□□□□□ -1.61
YKT6	YKL196C	SFA1	P32771	386 aa		5	□□□□□ -1.61
YKT6	YKL196C	POL5	P39985	1022 aa	Known RBP	5	□□□□□ -1.61
YKT6	YKL196C	SBP1	P10080	294 aa	Known RBP	4.99	□□□□□ -1.61
YKT6	YKL196C	ARI1	P53111	347 aa	Known RBP	4.99	□□□□□ -1.61
YKT6	YKL196C	ERS1	P17261	260 aa		4.98	□□□□□ -1.61
YKT6	YKL196C	PGM1	P33401	570 aa	Known RBP	4.98	□□□□□ -1.61
YKT6	YKL196C	SSF1	P38789	453 aa	Predicted RBP	4.98	□□□□□ -1.61
YKT6	YKL196C	DSE4	P53753	1117 aa		4.98	□□□□□ -1.61
YKT6	YKL196C	CDC55	Q00362	526 aa		4.98	□□□□□ -1.61
YKT6	YKL196C	RSC6	P25632	483 aa		4.97	□□□□□ -1.61
YKT6	YKL196C	NAM7	P30771	971 aa	Known RBP	4.97	□□□□□ -1.61
YKT6	YKL196C	RIM11	P38615	370 aa		4.97	□□□□□ -1.61
YKT6	YKL196C	YHL050C	P38721	697 aa		4.97	□□□□□ -1.61
YKT6	YKL196C	YHL008C	P38750	627 aa		4.97	□□□□□ -1.61
YKT6	YKL196C	YHR219W	P38900	624 aa		4.97	□□□□□ -1.61
YKT6	YKL196C	FET4	P40988	552 aa		4.97	□□□□□ -1.61
YKT6	YKL196C	LEM3	P42838	414 aa		4.97	□□□□□ -1.61
YKT6	YKL196C	SPO71	Q03868	1245 aa		4.97	□□□□□ -1.61
YKT6	YKL196C	BSC2	Q05611	235 aa		4.97	□□□□□ -1.61
YKT6	YKL196C	ELG1	Q12050	791 aa		4.97	□□□□□ -1.61
YKT6	YKL196C	CMR1	Q12510	522 aa	Known RBP	4.97	□□□□□ -1.61
YKT6	YKL196C	FLP1	P03870	423 aa		4.96	□□□□□ -1.62
YKT6	YKL196C	NPR1	P22211	790 aa		4.96	□□□□□ -1.62
YKT6	YKL196C	ECM2	P38241	364 aa	Known RBP	4.96	□□□□□ -1.62
YKT6	YKL196C	INP54	Q08227	384 aa	Known RBP	4.96	□□□□□ -1.62
YKT6	YKL196C	REC8	Q12188	680 aa		4.96	□□□□□ -1.62
YKT6	YKL196C	MAE1	P36013	669 aa	Known RBP	4.95	□□□□□ -1.62
YKT6	YKL196C	AKR1	P39010	764 aa		4.95	□□□□□ -1.62
YKT6	YKL196C	ALO1	P54783	526 aa	Known RBP	4.95	□□□□□ -1.62
YKT6	YKL196C	GLT1	Q12680	2145 aa	Known RBP	4.94	□□□□□ -1.62
YKT6	YKL196C	KIP3	P53086	805 aa	Known RBP	4.94	□□□□□ -1.62
YKT6	YKL196C	NCE103	P53615	221 aa		4.94	□□□□□ -1.62
YKT6	YKL196C	MSH6	Q03834	1242 aa		4.94	□□□□□ -1.62
YKT6	YKL196C	COQ2	P32378	372 aa		4.93	□□□□□ -1.62
YKT6	YKL196C	MON1	P53129	644 aa		4.93	□□□□□ -1.62
YKT6	YKL196C	YLR122C	Q12312	125 aa		4.93	□□□□□ -1.62
YKT6	YKL196C	PRP5	P21372	849 aa	Predicted RBP	4.92	□□□□□ -1.62
YKT6	YKL196C	NUT1	P53114	1132 aa		4.92	□□□□□ -1.62
YKT6	YKL196C	URN1	Q06525	465 aa	Known RBP	4.92	□□□□□ -1.62
YKT6	YKL196C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
YKT6	YKL196C	NOC3	Q07896	663 aa	Predicted RBP	4.92	□□□□□ -1.62
YKT6	YKL196C	TRP3	P00937	484 aa		4.91	□□□□□ -1.62
YKT6	YKL196C	HTS1	P07263	546 aa	Known RBP	4.91	□□□□□ -1.62
YKT6	YKL196C	YMR074C	Q04773	145 aa		4.91	□□□□□ -1.62
YKT6	YKL196C	WHI5	Q12416	295 aa		4.91	□□□□□ -1.62
YKT6	YKL196C	MET4	P32389	672 aa		4.9	□□□□□ -1.63
YKT6	YKL196C	KAE1	P36132	386 aa		4.9	□□□□□ -1.63
YKT6	YKL196C	YKR073C	P36153	106 aa		4.9	□□□□□ -1.63
YKT6	YKL196C	SAF1	P38352	637 aa		4.9	□□□□□ -1.63
YKT6	YKL196C	SAP155	P43612	1002 aa		4.9	□□□□□ -1.63
YKT6	YKL196C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
YKT6	YKL196C	TOS4	Q06266	489 aa		4.9	□□□□□ -1.63
YKT6	YKL196C	MSC6	Q08818	692 aa	Known RBP	4.9	□□□□□ -1.63
YKT6	YKL196C	MCM5	P29496	775 aa	Known RBP	4.89	□□□□□ -1.63
YKT6	YKL196C	IPL1	P38991	367 aa		4.89	□□□□□ -1.63
YKT6	YKL196C	YGR130C	P53278	816 aa		4.89	□□□□□ -1.63
YKT6	YKL196C	FAR11	P53917	953 aa		4.89	□□□□□ -1.63
YKT6	YKL196C	YAF9	P53930	226 aa		4.89	□□□□□ -1.63
YKT6	YKL196C	YIG1	Q08956	461 aa		4.89	□□□□□ -1.63
YKT6	YKL196C	PHO4	P07270	312 aa	Known RBP	4.88	□□□□□ -1.63
YKT6	YKL196C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.88	□□□□□ -1.63
YKT6	YKL196C	TY1A-DR6	P0CX70	440 aa		4.88	□□□□□ -1.63
YKT6	YKL196C	TY1A-ER1	P0CX71	440 aa		4.88	□□□□□ -1.63
YKT6	YKL196C	TY1A-LR2	P0CX72	440 aa		4.88	□□□□□ -1.63
YKT6	YKL196C	TY1A-PL	P0CX73	440 aa		4.88	□□□□□ -1.63
YKT6	YKL196C	TY1A-JR1	P0CX74	440 aa		4.88	□□□□□ -1.63
YKT6	YKL196C	TY1A-LR3	P0CX75	440 aa		4.88	□□□□□ -1.63
YKT6	YKL196C	TY1A-ML2	P0CX76	440 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms