RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNU114	YKL173W	PGM2	P37012	569 aa	Known RBP	3.37	□□□□□ -1.87
SNU114	YKL173W	SOG2	Q08817	791 aa		3.37	□□□□□ -1.87
SNU114	YKL173W	YDR215C	Q12240	137 aa		3.37	□□□□□ -1.87
SNU114	YKL173W	PRP5	P21372	849 aa	Predicted RBP	3.36	□□□□□ -1.87
SNU114	YKL173W	UFD2	P54860	961 aa		3.36	□□□□□ -1.87
SNU114	YKL173W	MSC6	Q08818	692 aa	Known RBP	3.36	□□□□□ -1.87
SNU114	YKL173W	RAD55	P38953	406 aa		3.36	□□□□□ -1.87
SNU114	YKL173W	SAP155	P43612	1002 aa		3.36	□□□□□ -1.87
SNU114	YKL173W	SUT1	P53032	299 aa	Known RBP	3.36	□□□□□ -1.87
SNU114	YKL173W	NSG2	P53898	299 aa		3.36	□□□□□ -1.87
SNU114	YKL173W	TY1B-DR4	Q07793	1604 aa		3.36	□□□□□ -1.87
SNU114	YKL173W	FUS1	P11710	512 aa		3.36	□□□□□ -1.87
SNU114	YKL173W	RIM11	P38615	370 aa		3.36	□□□□□ -1.87
SNU114	YKL173W	GLO3	P38682	493 aa	Known RBP	3.36	□□□□□ -1.87
SNU114	YKL173W	CCT8	P47079	568 aa	Known RBP	3.36	□□□□□ -1.87
SNU114	YKL173W	MSH6	Q03834	1242 aa		3.36	□□□□□ -1.87
SNU114	YKL173W	YTA7	P40340	1379 aa		3.35	□□□□□ -1.87
SNU114	YKL173W	TY4B-P	A0A0B7P3V8	1104 aa		3.35	□□□□□ -1.87
SNU114	YKL173W	AIM46	P38885	310 aa		3.35	□□□□□ -1.87
SNU114	YKL173W	PPT1	P53043	513 aa		3.35	□□□□□ -1.87
SNU114	YKL173W	BUD9	P53226	547 aa		3.35	□□□□□ -1.87
SNU114	YKL173W	CDC55	Q00362	526 aa		3.35	□□□□□ -1.87
SNU114	YKL173W	MTC5	Q03897	1148 aa		3.35	□□□□□ -1.87
SNU114	YKL173W	NUT2	Q06213	157 aa		3.35	□□□□□ -1.87
SNU114	YKL173W	TY4A-H	Q6Q5P6	413 aa		3.35	□□□□□ -1.87
SNU114	YKL173W	SWR1	Q05471	1514 aa		3.35	□□□□□ -1.87
SNU114	YKL173W	PYC2	P32327	1180 aa	Known RBP	3.35	□□□□□ -1.87
SNU114	YKL173W	PGM1	P33401	570 aa	Known RBP	3.35	□□□□□ -1.87
SNU114	YKL173W	YHL050C	P38721	697 aa		3.35	□□□□□ -1.87
SNU114	YKL173W	YHR219W	P38900	624 aa		3.35	□□□□□ -1.87
SNU114	YKL173W	STM1	P39015	273 aa	Known RBP	3.35	□□□□□ -1.87
SNU114	YKL173W	YNL011C	P53980	444 aa		3.35	□□□□□ -1.87
SNU114	YKL173W	NHA1	Q99271	985 aa		3.35	□□□□□ -1.87
SNU114	YKL173W	MET1	P36150	593 aa		3.34	□□□□□ -1.87
SNU114	YKL173W	FIR1	P40020	876 aa		3.34	□□□□□ -1.87
SNU114	YKL173W	YNR065C	P53751	1116 aa		3.34	□□□□□ -1.87
SNU114	YKL173W	MAG2	Q06436	670 aa	Known RBP	3.34	□□□□□ -1.87
SNU114	YKL173W	GLO4	Q12320	285 aa		3.34	□□□□□ -1.87
SNU114	YKL173W	BOI2	P39969	1040 aa		3.34	□□□□□ -1.88
SNU114	YKL173W	GUP1	P53154	560 aa		3.34	□□□□□ -1.88
SNU114	YKL173W	RSC2	Q06488	889 aa		3.34	□□□□□ -1.88
SNU114	YKL173W	AI3	P03877	415 aa		3.33	□□□□□ -1.88
SNU114	YKL173W	SLN1	P39928	1220 aa	Predicted RBP	3.33	□□□□□ -1.88
SNU114	YKL173W	POL5	P39985	1022 aa	Known RBP	3.33	□□□□□ -1.88
SNU114	YKL173W	CMR1	Q12510	522 aa	Known RBP	3.33	□□□□□ -1.88
SNU114	YKL173W	YPR053C	Q6Q5F3	151 aa		3.33	□□□□□ -1.88
SNU114	YKL173W	MET4	P32389	672 aa		3.33	□□□□□ -1.88
SNU114	YKL173W	SPC42	P36094	363 aa		3.33	□□□□□ -1.88
SNU114	YKL173W	ALG14	P38242	237 aa		3.33	□□□□□ -1.88
SNU114	YKL173W	YBR287W	P38355	427 aa		3.33	□□□□□ -1.88
SNU114	YKL173W	PPX1	P38698	397 aa		3.33	□□□□□ -1.88
SNU114	YKL173W	YMR187C	Q03236	431 aa		3.32	□□□□□ -1.88
SNU114	YKL173W	PUS1	Q12211	544 aa	Known RBP	3.32	□□□□□ -1.88
SNU114	YKL173W	FLP1	P03870	423 aa		3.32	□□□□□ -1.88
SNU114	YKL173W	SFA1	P32771	386 aa		3.32	□□□□□ -1.88
SNU114	YKL173W	GIP2	P40036	548 aa		3.32	□□□□□ -1.88
SNU114	YKL173W	LEM3	P42838	414 aa		3.32	□□□□□ -1.88
SNU114	YKL173W	POL32	P47110	350 aa		3.32	□□□□□ -1.88
SNU114	YKL173W	YJR124C	P47159	448 aa		3.32	□□□□□ -1.88
SNU114	YKL173W	TY1A-NL1	Q12391	440 aa	Known RBP	3.32	□□□□□ -1.88
SNU114	YKL173W	PHO4	P07270	312 aa	Known RBP	3.31	□□□□□ -1.88
SNU114	YKL173W	YNR014W	P53719	212 aa		3.31	□□□□□ -1.88
SNU114	YKL173W	SEC20	P28791	383 aa		3.31	□□□□□ -1.88
SNU114	YKL173W	SEC8	P32855	1065 aa		3.31	□□□□□ -1.88
SNU114	YKL173W	BSC2	Q05611	235 aa		3.31	□□□□□ -1.88
SNU114	YKL173W	NPR1	P22211	790 aa		3.3	□□□□□ -1.88
SNU114	YKL173W	GRS1	P38088	690 aa	Known RBP	3.3	□□□□□ -1.88
SNU114	YKL173W	HAS1	Q03532	505 aa	Known RBP	3.3	□□□□□ -1.88
SNU114	YKL173W	YJR107W	P47145	328 aa		3.3	□□□□□ -1.88
SNU114	YKL173W	ASF1	P32447	279 aa		3.3	□□□□□ -1.88
SNU114	YKL173W	PAN5	P38787	379 aa		3.3	□□□□□ -1.88
SNU114	YKL173W	ATG36	P46983	293 aa		3.3	□□□□□ -1.88
SNU114	YKL173W	PRY1	P47032	299 aa		3.3	□□□□□ -1.88
SNU114	YKL173W	ARI1	P53111	347 aa	Known RBP	3.3	□□□□□ -1.88
SNU114	YKL173W	DOS2	P54858	310 aa		3.3	□□□□□ -1.88
SNU114	YKL173W	TOS4	Q06266	489 aa		3.3	□□□□□ -1.88
SNU114	YKL173W	MCA1	Q08601	432 aa		3.3	□□□□□ -1.88
SNU114	YKL173W	RRM3	P38766	723 aa		3.29	□□□□□ -1.88
SNU114	YKL173W	TED1	P40533	473 aa		3.29	□□□□□ -1.88
SNU114	YKL173W	NUT1	P53114	1132 aa		3.29	□□□□□ -1.88
SNU114	YKL173W	SOK2	P53438	785 aa	Predicted RBP	3.29	□□□□□ -1.88
SNU114	YKL173W	YIG1	Q08956	461 aa		3.29	□□□□□ -1.88
SNU114	YKL173W	NCE103	P53615	221 aa		3.29	□□□□□ -1.88
SNU114	YKL173W	FAR11	P53917	953 aa		3.29	□□□□□ -1.88
SNU114	YKL173W	GAS5	Q08193	484 aa		3.29	□□□□□ -1.88
SNU114	YKL173W	LSB6	P42951	607 aa		3.28	□□□□□ -1.88
SNU114	YKL173W	LSB3	P43603	459 aa	Known RBP	3.28	□□□□□ -1.88
SNU114	YKL173W	YJL181W	P46987	611 aa		3.28	□□□□□ -1.88
SNU114	YKL173W	DSE4	P53753	1117 aa		3.28	□□□□□ -1.88
SNU114	YKL173W	OYE2	Q03558	400 aa	Known RBP	3.28	□□□□□ -1.88
SNU114	YKL173W	HTS1	P07263	546 aa	Known RBP	3.28	□□□□□ -1.88
SNU114	YKL173W	SAC7	P17121	654 aa		3.28	□□□□□ -1.88
SNU114	YKL173W	NOG1	Q02892	647 aa	Known RBP	3.28	□□□□□ -1.88
SNU114	YKL173W	FYV10	P40492	516 aa		3.27	□□□□□ -1.89
SNU114	YKL173W	DAK2	P43550	591 aa		3.27	□□□□□ -1.89
SNU114	YKL173W	SSK2	P53599	1579 aa		3.27	□□□□□ -1.89
SNU114	YKL173W	ERS1	P17261	260 aa		3.27	□□□□□ -1.89
SNU114	YKL173W	SPO71	Q03868	1245 aa		3.27	□□□□□ -1.89
SNU114	YKL173W	INP54	Q08227	384 aa	Known RBP	3.27	□□□□□ -1.89
SNU114	YKL173W	YAF9	P53930	226 aa		3.26	□□□□□ -1.89

Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms