RNA–Protein interactions for RNA: YKL170W

MRPL38, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRPL38, Length 417 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPL38	YKL170W	ALD3	P54114	506 aa		4.65	□□□□□ -1.67
MRPL38	YKL170W	TFA2	P36145	328 aa		4.64	□□□□□ -1.67
MRPL38	YKL170W	BIO5	P53744	561 aa	Known RBP	4.64	□□□□□ -1.67
MRPL38	YKL170W	TY4B-P	A0A0B7P3V8	1104 aa		4.63	□□□□□ -1.67
MRPL38	YKL170W	FUS1	P11710	512 aa		4.63	□□□□□ -1.67
MRPL38	YKL170W	PYC2	P32327	1180 aa	Known RBP	4.63	□□□□□ -1.67
MRPL38	YKL170W	UFD2	P54860	961 aa		4.63	□□□□□ -1.67
MRPL38	YKL170W	TRS120	Q04183	1289 aa		4.63	□□□□□ -1.67
MRPL38	YKL170W	TY4A-H	Q6Q5P6	413 aa		4.63	□□□□□ -1.67
MRPL38	YKL170W	LSB6	P42951	607 aa		4.62	□□□□□ -1.67
MRPL38	YKL170W	FRT1	Q99332	602 aa		4.62	□□□□□ -1.67
MRPL38	YKL170W	AMN1	P38285	549 aa	Predicted RBP	4.61	□□□□□ -1.67
MRPL38	YKL170W	PAN5	P38787	379 aa		4.61	□□□□□ -1.67
MRPL38	YKL170W	NEO1	P40527	1151 aa		4.61	□□□□□ -1.67
MRPL38	YKL170W	YJR124C	P47159	448 aa		4.61	□□□□□ -1.67
MRPL38	YKL170W	YNL011C	P53980	444 aa		4.61	□□□□□ -1.67
MRPL38	YKL170W	CTR9	P89105	1077 aa		4.61	□□□□□ -1.67
MRPL38	YKL170W	RSC4	Q02206	625 aa		4.61	□□□□□ -1.67
MRPL38	YKL170W	SOG2	Q08817	791 aa		4.61	□□□□□ -1.67
MRPL38	YKL170W	MNL2	Q12205	849 aa		4.61	□□□□□ -1.67
MRPL38	YKL170W	SLP1	Q12232	587 aa		4.61	□□□□□ -1.67
MRPL38	YKL170W	GUP1	P53154	560 aa		4.6	□□□□□ -1.67
MRPL38	YKL170W	YNR065C	P53751	1116 aa		4.6	□□□□□ -1.67
MRPL38	YKL170W	YPL034W	Q03083	165 aa		4.6	□□□□□ -1.67
MRPL38	YKL170W	NUT2	Q06213	157 aa		4.6	□□□□□ -1.67
MRPL38	YKL170W	COB	P00163	385 aa		4.59	□□□□□ -1.67
MRPL38	YKL170W	AI3	P03877	415 aa		4.59	□□□□□ -1.67
MRPL38	YKL170W	SAC7	P17121	654 aa		4.59	□□□□□ -1.67
MRPL38	YKL170W	ECM2	P38241	364 aa	Known RBP	4.59	□□□□□ -1.67
MRPL38	YKL170W	GPI13	Q07830	1017 aa		4.59	□□□□□ -1.67
MRPL38	YKL170W	GLO4	Q12320	285 aa		4.59	□□□□□ -1.67
MRPL38	YKL170W	DUR3	P33413	735 aa		4.58	□□□□□ -1.68
MRPL38	YKL170W	YHL050C	P38721	697 aa		4.58	□□□□□ -1.68
MRPL38	YKL170W	YHL008C	P38750	627 aa		4.58	□□□□□ -1.68
MRPL38	YKL170W	YHR219W	P38900	624 aa		4.58	□□□□□ -1.68
MRPL38	YKL170W	DSE4	P53753	1117 aa		4.58	□□□□□ -1.68
MRPL38	YKL170W	BSC2	Q05611	235 aa		4.58	□□□□□ -1.68
MRPL38	YKL170W	TY1A-NL1	Q12391	440 aa	Known RBP	4.58	□□□□□ -1.68
MRPL38	YKL170W	GLT1	Q12680	2145 aa	Known RBP	4.57	□□□□□ -1.68
MRPL38	YKL170W	SFA1	P32771	386 aa		4.57	□□□□□ -1.68
MRPL38	YKL170W	SSF1	P38789	453 aa	Predicted RBP	4.57	□□□□□ -1.68
MRPL38	YKL170W	CDC55	Q00362	526 aa		4.57	□□□□□ -1.68
MRPL38	YKL170W	HAS1	Q03532	505 aa	Known RBP	4.57	□□□□□ -1.68
MRPL38	YKL170W	RSC6	P25632	483 aa		4.56	□□□□□ -1.68
MRPL38	YKL170W	MAC1	P35192	417 aa		4.56	□□□□□ -1.68
MRPL38	YKL170W	POL5	P39985	1022 aa	Known RBP	4.56	□□□□□ -1.68
MRPL38	YKL170W	FET4	P40988	552 aa		4.56	□□□□□ -1.68
MRPL38	YKL170W	LEM3	P42838	414 aa		4.56	□□□□□ -1.68
MRPL38	YKL170W	SPO71	Q03868	1245 aa		4.56	□□□□□ -1.68
MRPL38	YKL170W	INP54	Q08227	384 aa	Known RBP	4.56	□□□□□ -1.68
MRPL38	YKL170W	HVG1	P0CE11	249 aa		4.55	□□□□□ -1.68
MRPL38	YKL170W	ERS1	P17261	260 aa		4.55	□□□□□ -1.68
MRPL38	YKL170W	MAE1	P36013	669 aa	Known RBP	4.55	□□□□□ -1.68
MRPL38	YKL170W	ARI1	P53111	347 aa	Known RBP	4.55	□□□□□ -1.68
MRPL38	YKL170W	FLP1	P03870	423 aa		4.54	□□□□□ -1.68
MRPL38	YKL170W	NPR1	P22211	790 aa		4.54	□□□□□ -1.68
MRPL38	YKL170W	NAM7	P30771	971 aa	Known RBP	4.54	□□□□□ -1.68
MRPL38	YKL170W	ELG1	Q12050	791 aa		4.54	□□□□□ -1.68
MRPL38	YKL170W	CMR1	Q12510	522 aa	Known RBP	4.54	□□□□□ -1.68
MRPL38	YKL170W	AIM44	Q99299	758 aa		4.54	□□□□□ -1.68
MRPL38	YKL170W	AKR1	P39010	764 aa		4.53	□□□□□ -1.68
MRPL38	YKL170W	THI12	P42883	340 aa		4.53	□□□□□ -1.68
MRPL38	YKL170W	THI5	P43534	340 aa		4.53	□□□□□ -1.68
MRPL38	YKL170W	THI11	P47183	340 aa		4.53	□□□□□ -1.68
MRPL38	YKL170W	KIP3	P53086	805 aa	Known RBP	4.53	□□□□□ -1.68
MRPL38	YKL170W	MON1	P53129	644 aa		4.53	□□□□□ -1.68
MRPL38	YKL170W	YMR074C	Q04773	145 aa		4.53	□□□□□ -1.68
MRPL38	YKL170W	THI13	Q07748	340 aa		4.53	□□□□□ -1.68
MRPL38	YKL170W	NOC3	Q07896	663 aa	Predicted RBP	4.53	□□□□□ -1.68
MRPL38	YKL170W	COQ2	P32378	372 aa		4.52	□□□□□ -1.69
MRPL38	YKL170W	RIM11	P38615	370 aa		4.52	□□□□□ -1.69
MRPL38	YKL170W	ALO1	P54783	526 aa	Known RBP	4.52	□□□□□ -1.69
MRPL38	YKL170W	REC8	Q12188	680 aa		4.52	□□□□□ -1.69
MRPL38	YKL170W	STM1	P39015	273 aa	Known RBP	4.51	□□□□□ -1.69
MRPL38	YKL170W	SAM37	P50110	327 aa		4.51	□□□□□ -1.69
MRPL38	YKL170W	NUT1	P53114	1132 aa		4.51	□□□□□ -1.69
MRPL38	YKL170W	NCE103	P53615	221 aa		4.51	□□□□□ -1.69
MRPL38	YKL170W	MSC6	Q08818	692 aa	Known RBP	4.51	□□□□□ -1.69
MRPL38	YKL170W	HTS1	P07263	546 aa	Known RBP	4.5	□□□□□ -1.69
MRPL38	YKL170W	MCM5	P29496	775 aa	Known RBP	4.5	□□□□□ -1.69
MRPL38	YKL170W	PGM1	P33401	570 aa	Known RBP	4.5	□□□□□ -1.69
MRPL38	YKL170W	IPL1	P38991	367 aa		4.5	□□□□□ -1.69
MRPL38	YKL170W	FAR11	P53917	953 aa		4.5	□□□□□ -1.69
MRPL38	YKL170W	MSH6	Q03834	1242 aa		4.5	□□□□□ -1.69
MRPL38	YKL170W	WHI5	Q12416	295 aa		4.5	□□□□□ -1.69
MRPL38	YKL170W	MET4	P32389	672 aa		4.49	□□□□□ -1.69
MRPL38	YKL170W	KAE1	P36132	386 aa		4.49	□□□□□ -1.69
MRPL38	YKL170W	OMA1	P36163	345 aa		4.49	□□□□□ -1.69
MRPL38	YKL170W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.49	□□□□□ -1.69	RIP-Chip
MRPL38	YKL170W	YLR122C	Q12312	125 aa		4.49	□□□□□ -1.69
MRPL38	YKL170W	PHO4	P07270	312 aa	Known RBP	4.48	□□□□□ -1.69
MRPL38	YKL170W	CHS2	P14180	963 aa		4.48	□□□□□ -1.69
MRPL38	YKL170W	PRP5	P21372	849 aa	Predicted RBP	4.48	□□□□□ -1.69
MRPL38	YKL170W	SAF1	P38352	637 aa		4.48	□□□□□ -1.69
MRPL38	YKL170W	PPX1	P38698	397 aa		4.48	□□□□□ -1.69
MRPL38	YKL170W	CIC1	P38779	376 aa	Known RBP	4.48	□□□□□ -1.69
MRPL38	YKL170W	RVS167	P39743	482 aa	Known RBP	4.48	□□□□□ -1.69
MRPL38	YKL170W	YGR130C	P53278	816 aa		4.48	□□□□□ -1.69
MRPL38	YKL170W	YAF9	P53930	226 aa		4.48	□□□□□ -1.69
MRPL38	YKL170W	PMT7	Q06644	662 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 144.5 ms