RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W SSB2P40150 613 aaKnown RBP5.66□□□□□ -1.5
TFA1YKL028W YJL049WP47048 450 aa5.66□□□□□ -1.5
TFA1YKL028W POB3Q04636 552 aaKnown RBP5.66□□□□□ -1.5
TFA1YKL028W NSE3Q05541 303 aa5.66□□□□□ -1.5
TFA1YKL028W PHO87P25360 923 aa5.65□□□□□ -1.5
TFA1YKL028W QDR1P40475 563 aa5.65□□□□□ -1.5
TFA1YKL028W FYV10P40492 516 aa5.65□□□□□ -1.5
TFA1YKL028W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.65□□□□□ -1.5not detected
TFA1YKL028W RPN4Q03465 531 aa5.65□□□□□ -1.5
TFA1YKL028W PIN2Q12057 282 aa5.65□□□□□ -1.5
TFA1YKL028W FUR4P05316 633 aaKnown RBP5.65□□□□□ -1.51
TFA1YKL028W SRS2P12954 1174 aa5.65□□□□□ -1.51
TFA1YKL028W NTH2P35172 780 aa5.65□□□□□ -1.51
TFA1YKL028W GLO3P38682 493 aaKnown RBP5.65□□□□□ -1.51
TFA1YKL028W YPL034WQ03083 165 aa5.65□□□□□ -1.51
TFA1YKL028W VPS16Q03308 798 aa5.65□□□□□ -1.51
TFA1YKL028W HAP4P14064 554 aa5.64□□□□□ -1.51
TFA1YKL028W MAD1P40957 749 aa5.64□□□□□ -1.51
TFA1YKL028W STI1P15705 589 aaKnown RBP RIP-Chip data5.63□□□□□ -1.51not detected
TFA1YKL028W PGM2P37012 569 aaKnown RBP5.63□□□□□ -1.51
TFA1YKL028W TPM2P40414 161 aa5.63□□□□□ -1.51
TFA1YKL028W PRK1P40494 810 aa5.63□□□□□ -1.51
TFA1YKL028W BUD6P41697 788 aa5.63□□□□□ -1.51
TFA1YKL028W ROM1P53046 1155 aa5.63□□□□□ -1.51
TFA1YKL028W SSF2Q12153 453 aaPredicted RBP5.63□□□□□ -1.51
TFA1YKL028W NHA1Q99271 985 aa5.63□□□□□ -1.51
TFA1YKL028W PDI1P17967 522 aaKnown RBP5.62□□□□□ -1.51
TFA1YKL028W GRX4P32642 244 aa5.62□□□□□ -1.51
TFA1YKL028W ALG14P38242 237 aa5.62□□□□□ -1.51
TFA1YKL028W NOP2P40991 618 aaKnown RBP5.62□□□□□ -1.51
TFA1YKL028W YGL081WP53156 320 aa5.62□□□□□ -1.51
TFA1YKL028W PUN1Q06991 263 aa5.62□□□□□ -1.51
TFA1YKL028W WRS1Q12109 432 aaKnown RBP5.62□□□□□ -1.51
TFA1YKL028W Q0182Q9ZZW1 134 aa5.62□□□□□ -1.51
TFA1YKL028W CYT1P07143 309 aa5.61□□□□□ -1.51
TFA1YKL028W PBP2P38151 413 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
TFA1YKL028W ACS2P52910 683 aaKnown RBP5.61□□□□□ -1.51
TFA1YKL028W HEH2Q03281 663 aa5.61□□□□□ -1.51
TFA1YKL028W RMD1Q03441 430 aa5.61□□□□□ -1.51
TFA1YKL028W CLN2P20438 545 aa5.6□□□□□ -1.51
TFA1YKL028W MCM2P29469 868 aa5.6□□□□□ -1.51
TFA1YKL028W PMC1P38929 1173 aaPredicted RBP5.6□□□□□ -1.51
TFA1YKL028W BUD9P53226 547 aa5.6□□□□□ -1.51
TFA1YKL028W ALO1P54783 526 aaKnown RBP5.6□□□□□ -1.51
TFA1YKL028W YOL057WQ08225 711 aa5.6□□□□□ -1.51
TFA1YKL028W GLT1Q12680 2145 aaKnown RBP5.59□□□□□ -1.51
TFA1YKL028W NAR1P23503 491 aaKnown RBP5.59□□□□□ -1.51
TFA1YKL028W MTO1P53070 669 aa5.59□□□□□ -1.51
TFA1YKL028W GIS4Q04233 774 aa5.59□□□□□ -1.51
TFA1YKL028W SPR28Q04921 423 aa5.59□□□□□ -1.51
TFA1YKL028W GAS4Q08271 471 aa5.59□□□□□ -1.51
TFA1YKL028W CDC53Q12018 815 aaKnown RBP5.59□□□□□ -1.51
TFA1YKL028W YOR131CQ12486 218 aa5.59□□□□□ -1.51
TFA1YKL028W TSC13Q99190 310 aa5.59□□□□□ -1.51
TFA1YKL028W BDF2Q07442 638 aa5.58□□□□□ -1.52
TFA1YKL028W YGR161W-CQ3E744 92 aa5.58□□□□□ -1.52
TFA1YKL028W LSO1Q3E827 93 aa5.58□□□□□ -1.52
TFA1YKL028W MNN1P39106 762 aa5.57□□□□□ -1.52
TFA1YKL028W ZDS1P50111 915 aaKnown RBP5.57□□□□□ -1.52
TFA1YKL028W SKP1P52286 194 aa5.57□□□□□ -1.52
TFA1YKL028W ESF1Q06344 628 aaKnown RBP5.57□□□□□ -1.52
TFA1YKL028W PHO4P07270 312 aaKnown RBP5.57□□□□□ -1.52
TFA1YKL028W VAN1P23642 535 aa5.57□□□□□ -1.52
TFA1YKL028W RPT1P33299 467 aaKnown RBP5.57□□□□□ -1.52
TFA1YKL028W NCL1P38205 684 aaKnown RBP5.57□□□□□ -1.52
TFA1YKL028W YJR142WP47173 342 aa5.57□□□□□ -1.52
TFA1YKL028W MDG1P53885 366 aa5.57□□□□□ -1.52
TFA1YKL028W CUS1Q02554 436 aaPredicted RBP5.57□□□□□ -1.52
TFA1YKL028W TRS120Q04183 1289 aa5.57□□□□□ -1.52
TFA1YKL028W UTP4Q06679 776 aaKnown RBP5.57□□□□□ -1.52
TFA1YKL028W AI3P03877 415 aa5.56□□□□□ -1.52
TFA1YKL028W OMA1P36163 345 aa5.56□□□□□ -1.52
TFA1YKL028W INP52P50942 1183 aa5.56□□□□□ -1.52
TFA1YKL028W UTP14Q04500 899 aaKnown RBP5.56□□□□□ -1.52
TFA1YKL028W GPI13Q07830 1017 aa5.56□□□□□ -1.52
TFA1YKL028W MET6P05694 767 aaKnown RBP5.55□□□□□ -1.52
TFA1YKL028W UBP1P25037 809 aa5.55□□□□□ -1.52
TFA1YKL028W PGM1P33401 570 aaKnown RBP5.55□□□□□ -1.52
TFA1YKL028W MNR2P35724 969 aa5.55□□□□□ -1.52
TFA1YKL028W UBP12P39538 1254 aa5.55□□□□□ -1.52
TFA1YKL028W GAS5Q08193 484 aa5.55□□□□□ -1.52
TFA1YKL028W TRS33Q99394 268 aa5.55□□□□□ -1.52
TFA1YKL028W PEP7P32609 515 aa5.54□□□□□ -1.52
TFA1YKL028W SCD5P34758 872 aa5.53□□□□□ -1.52
TFA1YKL028W BOI1P38041 980 aaKnown RBP5.53□□□□□ -1.52
TFA1YKL028W DAK2P43550 591 aa5.53□□□□□ -1.52
TFA1YKL028W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
TFA1YKL028W GCD6P32501 712 aaKnown RBP5.52□□□□□ -1.53
TFA1YKL028W ENP1P38333 483 aaKnown RBP5.52□□□□□ -1.53
TFA1YKL028W TAT2P38967 592 aa5.52□□□□□ -1.53
TFA1YKL028W RPS26AP39938 119 aaKnown RBP5.52□□□□□ -1.53
TFA1YKL028W RPS26BP39939 119 aaKnown RBP5.52□□□□□ -1.53
TFA1YKL028W NUP82P40368 713 aa5.52□□□□□ -1.53
TFA1YKL028W MSH4P40965 878 aaPredicted RBP5.52□□□□□ -1.53
TFA1YKL028W CWC24P53769 259 aa5.52□□□□□ -1.53
TFA1YKL028W RPC31P17890 251 aa5.51□□□□□ -1.53
TFA1YKL028W SUV3P32580 737 aa5.51□□□□□ -1.53
TFA1YKL028W PET112P33893 541 aa5.51□□□□□ -1.53
TFA1YKL028W GRX7P38068 203 aa5.51□□□□□ -1.53
TFA1YKL028W HXT5P38695 592 aa5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms