RNA–Protein interactions for RNA: YJR049C

UTR1, Transcript of ATP-NADH kinase, yeast

Gene UTR1, Length 1,593 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UTR1	YJR049C	PFF1	P38244	976 aa		11.29	□□□□□ -0.6
UTR1	YJR049C	CHO2	P05374	869 aa	Known RBP	11.28	□□□□□ -0.6
UTR1	YJR049C	BUD6	P41697	788 aa		11.28	□□□□□ -0.6
UTR1	YJR049C	EPL1	P43572	832 aa		11.28	□□□□□ -0.6
UTR1	YJR049C	PTK1	P36002	662 aa	Predicted RBP	11.28	□□□□□ -0.6
UTR1	YJR049C	BOI1	P38041	980 aa	Known RBP	11.28	□□□□□ -0.6
UTR1	YJR049C	RFC5	P38251	354 aa		11.28	□□□□□ -0.6
UTR1	YJR049C	RRP8	P38961	392 aa	Known RBP	11.28	□□□□□ -0.6
UTR1	YJR049C	EST2	Q06163	884 aa		11.28	□□□□□ -0.6
UTR1	YJR049C	SMY1	P32364	656 aa	Known RBP	11.27	□□□□□ -0.61
UTR1	YJR049C	SIS2	P36024	562 aa		11.27	□□□□□ -0.61
UTR1	YJR049C	UGA2	P38067	497 aa		11.26	□□□□□ -0.61
UTR1	YJR049C	YFH7	P43591	353 aa		11.26	□□□□□ -0.61
UTR1	YJR049C	UBP10	P53874	792 aa	Predicted RBP	11.26	□□□□□ -0.61
UTR1	YJR049C	ERO1	Q03103	563 aa		11.26	□□□□□ -0.61
UTR1	YJR049C	UFD2	P54860	961 aa		11.25	□□□□□ -0.61
UTR1	YJR049C	RPS15	Q01855	142 aa	Known RBP	11.25	□□□□□ -0.61
UTR1	YJR049C	TOS4	Q06266	489 aa		11.25	□□□□□ -0.61
UTR1	YJR049C	HDA1	P53973	706 aa		11.24	□□□□□ -0.61
UTR1	YJR049C	ETT1	Q08421	412 aa	Known RBP	11.24	□□□□□ -0.61
UTR1	YJR049C	DDP1	Q99321	188 aa	Known RBP	11.24	□□□□□ -0.61
UTR1	YJR049C	MPH3	P0CE00	602 aa		11.24	□□□□□ -0.61
UTR1	YJR049C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	11.24	□□□□□ -0.61	not detected
UTR1	YJR049C	AKR1	P39010	764 aa		11.24	□□□□□ -0.61
UTR1	YJR049C	UBX2	Q04228	584 aa		11.24	□□□□□ -0.61
UTR1	YJR049C	MDL2	P33311	773 aa		11.23	□□□□□ -0.61
UTR1	YJR049C	NPR3	P38742	1146 aa		11.23	□□□□□ -0.61
UTR1	YJR049C	PTK2	P47116	818 aa	Known RBP	11.23	□□□□□ -0.61
UTR1	YJR049C	PSF3	Q12146	194 aa		11.23	□□□□□ -0.61
UTR1	YJR049C	TRS33	Q99394	268 aa		11.23	□□□□□ -0.61
UTR1	YJR049C	SNF3	P10870	884 aa		11.22	□□□□□ -0.61
UTR1	YJR049C	DIT2	P21595	489 aa		11.22	□□□□□ -0.61
UTR1	YJR049C	RET1	P22276	1149 aa	Known RBP	11.22	□□□□□ -0.61
UTR1	YJR049C	SET4	P42948	560 aa		11.22	□□□□□ -0.61
UTR1	YJR049C	JJJ2	P46997	583 aa		11.22	□□□□□ -0.61
UTR1	YJR049C	HSP82	P02829	709 aa	Known RBP	11.21	□□□□□ -0.61
UTR1	YJR049C	PRI1	P10363	409 aa		11.21	□□□□□ -0.61
UTR1	YJR049C	HCA4	P20448	770 aa	Known RBP	11.21	□□□□□ -0.61
UTR1	YJR049C	YHL050C	P38721	697 aa		11.21	□□□□□ -0.61
UTR1	YJR049C	TFC6	Q06339	672 aa		11.21	□□□□□ -0.61
UTR1	YJR049C	WRS1	Q12109	432 aa	Known RBP	11.21	□□□□□ -0.61
UTR1	YJR049C	FLO1	P32768	1537 aa		11.21	□□□□□ -0.62
UTR1	YJR049C	PGI1	P12709	554 aa	Known RBP	11.2	□□□□□ -0.62
UTR1	YJR049C	CBP3	P21560	335 aa		11.2	□□□□□ -0.62
UTR1	YJR049C	ANP1	P32629	500 aa		11.2	□□□□□ -0.62
UTR1	YJR049C	ERT1	P38140	529 aa		11.2	□□□□□ -0.62
UTR1	YJR049C	RPN10	P38886	268 aa	Known RBP	11.2	□□□□□ -0.62
UTR1	YJR049C	RTS1	P38903	757 aa		11.2	□□□□□ -0.62
UTR1	YJR049C	MYO3	P36006	1272 aa		11.2	□□□□□ -0.62
UTR1	YJR049C	MSN5	P52918	1224 aa		11.2	□□□□□ -0.62
UTR1	YJR049C	MRD1	Q06106	887 aa	Known RBP	11.2	□□□□□ -0.62
UTR1	YJR049C	ISW2	Q08773	1120 aa		11.2	□□□□□ -0.62
UTR1	YJR049C	GPA1	P08539	472 aa		11.19	□□□□□ -0.62
UTR1	YJR049C	SWI4	P25302	1093 aa	Known RBP	11.19	□□□□□ -0.62
UTR1	YJR049C	MCM2	P29469	868 aa		11.19	□□□□□ -0.62
UTR1	YJR049C	MIC60	P36112	540 aa		11.19	□□□□□ -0.62
UTR1	YJR049C	PIP2	P52960	996 aa		11.19	□□□□□ -0.62
UTR1	YJR049C	SSL2	Q00578	843 aa		11.19	□□□□□ -0.62
UTR1	YJR049C	BMH2	P34730	273 aa	Known RBP	11.18	□□□□□ -0.62
UTR1	YJR049C	MRPL10	P36520	322 aa		11.18	□□□□□ -0.62
UTR1	YJR049C	RFT1	P38206	574 aa	Predicted RBP	11.18	□□□□□ -0.62
UTR1	YJR049C	YER130C	P39959	443 aa		11.18	□□□□□ -0.62
UTR1	YJR049C	NSG2	P53898	299 aa		11.18	□□□□□ -0.62
UTR1	YJR049C	SGD1	Q06132	899 aa		11.18	□□□□□ -0.62
UTR1	YJR049C	TAF13	P11747	167 aa		11.17	□□□□□ -0.62
UTR1	YJR049C	ATE1	P16639	503 aa		11.17	□□□□□ -0.62
UTR1	YJR049C	GSM1	P42950	618 aa		11.17	□□□□□ -0.62
UTR1	YJR049C	YPT11	P48559	417 aa		11.17	□□□□□ -0.62
UTR1	YJR049C	DCS2	Q12123	353 aa		11.17	□□□□□ -0.62
UTR1	YJR049C	ARG82	P07250	355 aa		11.16	□□□□□ -0.62
UTR1	YJR049C	YKL222C	P35995	705 aa		11.16	□□□□□ -0.62
UTR1	YJR049C	PRP42	Q03776	544 aa	Known RBP	11.16	□□□□□ -0.62
UTR1	YJR049C	GAS5	Q08193	484 aa		11.16	□□□□□ -0.62
UTR1	YJR049C	GRX6	Q12438	231 aa		11.16	□□□□□ -0.62
UTR1	YJR049C	CDC6	P09119	513 aa		11.16	□□□□□ -0.62
UTR1	YJR049C	CSM2	P40465	213 aa		11.16	□□□□□ -0.62
UTR1	YJR049C	MSH4	P40965	878 aa	Predicted RBP	11.16	□□□□□ -0.62
UTR1	YJR049C	VMS1	Q04311	632 aa	Known RBP	11.16	□□□□□ -0.62
UTR1	YJR049C	YPL260W	Q08977	551 aa		11.16	□□□□□ -0.62
UTR1	YJR049C	RAD61	Q99359	647 aa		11.16	□□□□□ -0.62
UTR1	YJR049C	RGP1	P16664	663 aa		11.15	□□□□□ -0.62
UTR1	YJR049C	VPS1	P21576	704 aa	Known RBP	11.15	□□□□□ -0.62
UTR1	YJR049C	MAK31	P23059	88 aa		11.15	□□□□□ -0.62
UTR1	YJR049C	RIT1	P23796	513 aa		11.15	□□□□□ -0.62
UTR1	YJR049C	VID27	P40157	782 aa		11.15	□□□□□ -0.62
UTR1	YJR049C	APL6	P46682	809 aa		11.15	□□□□□ -0.62
UTR1	YJR049C	EAF6	P47128	113 aa		11.15	□□□□□ -0.62
UTR1	YJR049C	YOR111W	Q99210	232 aa		11.15	□□□□□ -0.62
UTR1	YJR049C	HXK1	P04806	485 aa	Known RBP	11.14	□□□□□ -0.63
UTR1	YJR049C	MCM4	P30665	933 aa	Known RBP	11.14	□□□□□ -0.63
UTR1	YJR049C	PRO3	P32263	286 aa	Known RBP	11.14	□□□□□ -0.63
UTR1	YJR049C	MPE1	P35728	441 aa	Known RBP	11.14	□□□□□ -0.63
UTR1	YJR049C	MAL31	P38156	614 aa		11.14	□□□□□ -0.63
UTR1	YJR049C	PUS6	P53294	404 aa		11.13	□□□□□ -0.63
UTR1	YJR049C	CTR9	P89105	1077 aa		11.13	□□□□□ -0.63
UTR1	YJR049C	MYO5	Q04439	1219 aa	Known RBP	11.13	□□□□□ -0.63
UTR1	YJR049C	GET3	Q12154	354 aa	Known RBP	11.13	□□□□□ -0.63
UTR1	YJR049C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.13	□□□□□ -0.63	not detected
UTR1	YJR049C	YKT6	P36015	200 aa	Known RBP	11.12	□□□□□ -0.63
UTR1	YJR049C	RXT2	P38255	430 aa		11.12	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms