RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP7	YIL156W	DAS1	P47005	663 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	YJR120W	P47157	116 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	OSH2	Q12451	1283 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	DPS1	P04802	557 aa	Known RBP	6.12	□□□□□ -1.43
UBP7	YIL156W	MSH2	P25847	964 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	STE5	P32917	917 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	MFT1	P33441	392 aa	Known RBP	6.12	□□□□□ -1.43
UBP7	YIL156W	YBR184W	P38299	523 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	TMA7	Q3E764	64 aa	Known RBP	6.12	□□□□□ -1.43
UBP7	YIL156W	TY1A-DR4	O74302	440 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	TY1A-H	P0C2I4	478 aa	Known RBP	6.12	□□□□□ -1.43
UBP7	YIL156W	TY1A-A	P0CX57	440 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	TY1A-PR1	P0CX58	440 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	TY1A-OR	P0CX59	440 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	TY1A-PR2	P0CX60	440 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	TY1A-DR5	P0CX65	440 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	TY1A-ER2	P0CX66	440 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	TY1A-GR3	P0CX67	440 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	TY1A-LR1	P0CX68	440 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	TY1A-MR2	P0CX69	440 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	SEC2	P17065	759 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	BAS1	P22035	811 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	GGA2	P38817	585 aa	Known RBP	6.12	□□□□□ -1.43
UBP7	YIL156W	TY1A-JR2	P47099	440 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	YGR021W	P53212	290 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	TY1A-DR1	Q03856	440 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	TY1A-ML1	Q04706	440 aa	Known RBP	6.12	□□□□□ -1.43
UBP7	YIL156W	SPO75	Q07798	868 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	TY1A-BR	Q12217	440 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	TY1A-NL2	Q12470	440 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	TY1A-GR2	Q12485	440 aa		6.12	□□□□□ -1.43
UBP7	YIL156W	GCD11	P32481	527 aa	Known RBP	6.11	□□□□□ -1.43
UBP7	YIL156W	RPN12	P32496	274 aa		6.11	□□□□□ -1.43
UBP7	YIL156W	SMC1	P32908	1225 aa		6.11	□□□□□ -1.43
UBP7	YIL156W	NMA111	P53920	997 aa		6.11	□□□□□ -1.43
UBP7	YIL156W	ATG13	Q06628	738 aa		6.11	□□□□□ -1.43
UBP7	YIL156W	MRPL33	P20084	86 aa		6.11	□□□□□ -1.43
UBP7	YIL156W	PAC1	P39946	494 aa	Known RBP	6.11	□□□□□ -1.43
UBP7	YIL156W	YGR237C	P50089	785 aa		6.11	□□□□□ -1.43
UBP7	YIL156W	MTC5	Q03897	1148 aa		6.11	□□□□□ -1.43
UBP7	YIL156W	INP54	Q08227	384 aa	Known RBP	6.11	□□□□□ -1.43
UBP7	YIL156W	NIT1	P40447	199 aa		6.1	□□□□□ -1.43
UBP7	YIL156W	SND1	Q04007	877 aa		6.1	□□□□□ -1.43
UBP7	YIL156W	PRP40	P33203	583 aa	Known RBP	6.1	□□□□□ -1.43
UBP7	YIL156W	ESC2	Q06340	456 aa		6.1	□□□□□ -1.43
UBP7	YIL156W	NYV1	Q12255	253 aa		6.1	□□□□□ -1.43
UBP7	YIL156W	RPL8B	P29453	256 aa	Known RBP	6.1	□□□□□ -1.43
UBP7	YIL156W	CIT1	P00890	479 aa		6.09	□□□□□ -1.43
UBP7	YIL156W	HSP60	P19882	572 aa	Known RBP	6.09	□□□□□ -1.43
UBP7	YIL156W	HXT5	P38695	592 aa		6.09	□□□□□ -1.43
UBP7	YIL156W	KXD1	P53158	218 aa		6.09	□□□□□ -1.43
UBP7	YIL156W	SRF1	Q12516	437 aa		6.09	□□□□□ -1.43
UBP7	YIL156W	HIR1	P32479	840 aa		6.09	□□□□□ -1.43
UBP7	YIL156W	HXT8	P40886	569 aa		6.09	□□□□□ -1.43
UBP7	YIL156W	HLJ1	P48353	224 aa		6.09	□□□□□ -1.43
UBP7	YIL156W	TFB2	Q02939	513 aa		6.09	□□□□□ -1.43
UBP7	YIL156W	YCS4	Q06156	1176 aa		6.09	□□□□□ -1.43
UBP7	YIL156W	RTT10	Q08924	1013 aa		6.09	□□□□□ -1.43
UBP7	YIL156W	ATP4	P05626	244 aa		6.08	□□□□□ -1.44
UBP7	YIL156W	GCR1	P07261	785 aa		6.08	□□□□□ -1.44
UBP7	YIL156W	TOA1	P32773	286 aa		6.08	□□□□□ -1.44
UBP7	YIL156W	IES5	P40060	125 aa		6.08	□□□□□ -1.44
UBP7	YIL156W	ESF2	P53743	316 aa	Known RBP	6.08	□□□□□ -1.44
UBP7	YIL156W	YPL109C	Q02981	657 aa		6.08	□□□□□ -1.44
UBP7	YIL156W	MCM5	P29496	775 aa	Known RBP	6.08	□□□□□ -1.44
UBP7	YIL156W	UGA4	P32837	571 aa		6.08	□□□□□ -1.44
UBP7	YIL156W	HXT10	P43581	546 aa		6.08	□□□□□ -1.44
UBP7	YIL156W	PEX29	Q03370	554 aa		6.08	□□□□□ -1.44
UBP7	YIL156W	MET5	P47169	1442 aa		6.08	□□□□□ -1.44
UBP7	YIL156W	PIF1	P07271	859 aa		6.08	□□□□□ -1.44
UBP7	YIL156W	EEB1	Q02891	456 aa		6.08	□□□□□ -1.44
UBP7	YIL156W	PML39	Q03760	334 aa		6.08	□□□□□ -1.44
UBP7	YIL156W	FMP25	Q08023	583 aa		6.07	□□□□□ -1.44
UBP7	YIL156W	ALO1	P54783	526 aa	Known RBP	6.07	□□□□□ -1.44
UBP7	YIL156W	PIC2	P40035	300 aa		6.06	□□□□□ -1.44
UBP7	YIL156W	YEF3	P16521	1044 aa	Known RBP	6.06	□□□□□ -1.44
UBP7	YIL156W	MTC2	P34246	357 aa		6.06	□□□□□ -1.44
UBP7	YIL156W	IES1	P43579	692 aa		6.06	□□□□□ -1.44
UBP7	YIL156W	RTA1	P53047	317 aa		6.06	□□□□□ -1.44
UBP7	YIL156W	JIP4	Q03361	876 aa		6.06	□□□□□ -1.44
UBP7	YIL156W	REC8	Q12188	680 aa		6.06	□□□□□ -1.44
UBP7	YIL156W	UTR2	P32623	467 aa		6.06	□□□□□ -1.44
UBP7	YIL156W	RAD55	P38953	406 aa		6.06	□□□□□ -1.44
UBP7	YIL156W	PMT3	P47190	753 aa		6.06	□□□□□ -1.44
UBP7	YIL156W	ELP4	Q02884	456 aa	Known RBP	6.06	□□□□□ -1.44
UBP7	YIL156W	NUP145	P49687	1317 aa		6.06	□□□□□ -1.44
UBP7	YIL156W	BPT1	P14772	1559 aa		6.06	□□□□□ -1.44
UBP7	YIL156W	VID27	P40157	782 aa		6.05	□□□□□ -1.44
UBP7	YIL156W	UGO1	Q03327	502 aa		6.05	□□□□□ -1.44
UBP7	YIL156W	TRP5	P00931	707 aa	Known RBP	6.05	□□□□□ -1.44
UBP7	YIL156W	ADI1	Q03677	179 aa		6.05	□□□□□ -1.44
UBP7	YIL156W	EAF1	Q06337	982 aa		6.05	□□□□□ -1.44
UBP7	YIL156W	KAR2	P16474	682 aa	Known RBP	6.04	□□□□□ -1.44
UBP7	YIL156W	VMA3	P25515	160 aa		6.04	□□□□□ -1.44
UBP7	YIL156W	ARE1	P25628	610 aa		6.04	□□□□□ -1.44
UBP7	YIL156W	EMW1	P42842	904 aa	Known RBP	6.04	□□□□□ -1.44
UBP7	YIL156W	KRI1	P42846	591 aa	Known RBP	6.04	□□□□□ -1.44
UBP7	YIL156W	BDP1	P46678	594 aa		6.04	□□□□□ -1.44
UBP7	YIL156W	PFD1	P46988	109 aa		6.04	□□□□□ -1.44
UBP7	YIL156W	ERP6	P53198	216 aa		6.04	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 44.1 ms