RNA–Protein interactions for RNA: YHR008C

SOD2, Transcript of Mitochondrial manganese superoxide dismutase, yeastyeast

Gene SOD2, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOD2YHR008C GLO3P38682 493 aaKnown RBP10.21□□□□□ -0.77
SOD2YHR008C YHR131CP38835 850 aa10.21□□□□□ -0.77
SOD2YHR008C PER1P25625 357 aa10.2□□□□□ -0.78
SOD2YHR008C SPT21P35209 758 aa10.2□□□□□ -0.78
SOD2YHR008C YNR014WP53719 212 aa10.2□□□□□ -0.78
SOD2YHR008C HEF3P53978 1044 aaKnown RBP10.2□□□□□ -0.78
SOD2YHR008C SPB4P25808 606 aaPredicted RBP10.19□□□□□ -0.78
SOD2YHR008C EUG1P32474 517 aa10.19□□□□□ -0.78
SOD2YHR008C SWC3P31376 625 aa10.18□□□□□ -0.78
SOD2YHR008C MDL2P33311 773 aa10.18□□□□□ -0.78
SOD2YHR008C KSP1P38691 1029 aaKnown RBP10.18□□□□□ -0.78
SOD2YHR008C YGR122WP53272 402 aa10.18□□□□□ -0.78
SOD2YHR008C UBX5Q06682 500 aa10.18□□□□□ -0.78
SOD2YHR008C YIR042CP40586 236 aa10.17□□□□□ -0.78
SOD2YHR008C NSG2P53898 299 aa10.17□□□□□ -0.78
SOD2YHR008C RGT1P32862 1170 aa10.16□□□□□ -0.78
SOD2YHR008C INM2Q05533 292 aa10.16□□□□□ -0.78
SOD2YHR008C VMA2P16140 517 aaKnown RBP10.15□□□□□ -0.78
SOD2YHR008C BCS1P32839 456 aa10.15□□□□□ -0.78
SOD2YHR008C GPB2P39717 880 aa10.15□□□□□ -0.78
SOD2YHR008C AVT3P36062 692 aa10.14□□□□□ -0.79
SOD2YHR008C YAF9P53930 226 aa10.14□□□□□ -0.79
SOD2YHR008C YDL124WQ07551 312 aaKnown RBP10.14□□□□□ -0.79
SOD2YHR008C NOP8Q08287 484 aaPredicted RBP10.14□□□□□ -0.79
SOD2YHR008C TFC8Q12308 588 aa10.14□□□□□ -0.79
SOD2YHR008C DUR1,2P32528 1835 aaKnown RBP10.14□□□□□ -0.79
SOD2YHR008C MIP1P15801 1254 aa10.13□□□□□ -0.79
SOD2YHR008C TPD3P31383 635 aa10.13□□□□□ -0.79
SOD2YHR008C RAD24P32641 659 aa10.13□□□□□ -0.79
SOD2YHR008C LDB19Q12502 818 aa10.13□□□□□ -0.79
SOD2YHR008C PIF1P07271 859 aa10.12□□□□□ -0.79
SOD2YHR008C ERG12P07277 443 aa10.12□□□□□ -0.79
SOD2YHR008C HEM1P09950 548 aaPredicted RBP10.12□□□□□ -0.79
SOD2YHR008C SEC18P18759 758 aaKnown RBP10.12□□□□□ -0.79
SOD2YHR008C KTR2P33550 425 aa10.12□□□□□ -0.79
SOD2YHR008C GRS1P38088 690 aaKnown RBP10.12□□□□□ -0.79
SOD2YHR008C CST26P38226 397 aa10.12□□□□□ -0.79
SOD2YHR008C HAL5P38970 855 aaKnown RBP10.12□□□□□ -0.79
SOD2YHR008C TIF4631P39935 952 aaKnown RBP10.12□□□□□ -0.79
SOD2YHR008C BOI2P39969 1040 aa10.12□□□□□ -0.79
SOD2YHR008C GYP5Q12344 894 aa10.11□□□□□ -0.79
SOD2YHR008C MPH3P0CE00 602 aa10.1□□□□□ -0.79
SOD2YHR008C DBP1P24784 617 aaKnown RBP10.1□□□□□ -0.79
SOD2YHR008C PIP2P52960 996 aa10.1□□□□□ -0.79
SOD2YHR008C TOR2P32600 2474 aaKnown RBP10.09□□□□□ -0.79
SOD2YHR008C IRE1P32361 1115 aa10.09□□□□□ -0.79
SOD2YHR008C BOI1P38041 980 aaKnown RBP10.09□□□□□ -0.79
SOD2YHR008C YML037CQ03703 340 aa10.09□□□□□ -0.79
SOD2YHR008C DUS4Q06063 367 aa10.09□□□□□ -0.79
SOD2YHR008C LAP2Q10740 671 aa10.09□□□□□ -0.79
SOD2YHR008C RRI2Q12348 645 aa10.09□□□□□ -0.79
SOD2YHR008C TOR1P35169 2470 aa10.09□□□□□ -0.79
SOD2YHR008C CYB2P00175 591 aa10.08□□□□□ -0.8
SOD2YHR008C KRS1P15180 591 aaKnown RBP10.08□□□□□ -0.8
SOD2YHR008C FUN12P39730 1002 aaKnown RBP10.08□□□□□ -0.8
SOD2YHR008C TOM71P38825 639 aaKnown RBP10.07□□□□□ -0.8
SOD2YHR008C KEL3Q08979 651 aaPredicted RBP10.07□□□□□ -0.8
SOD2YHR008C CDC19P00549 500 aaKnown RBP10.06□□□□□ -0.8
SOD2YHR008C NOC2P39744 710 aaKnown RBP10.06□□□□□ -0.8
SOD2YHR008C NPL4P33755 580 aa10.05□□□□□ -0.8
SOD2YHR008C YDR524C-BQ3E6R4 66 aa10.05□□□□□ -0.8
SOD2YHR008C YKR018CP36114 725 aa10.04□□□□□ -0.8
SOD2YHR008C SKP2P42843 763 aa10.04□□□□□ -0.8
SOD2YHR008C RSC8P43609 557 aaKnown RBP10.04□□□□□ -0.8
SOD2YHR008C YPP1P46951 817 aa10.04□□□□□ -0.8
SOD2YHR008C PTK2P47116 818 aaKnown RBP10.04□□□□□ -0.8
SOD2YHR008C YNL193WP53870 558 aa10.04□□□□□ -0.8
SOD2YHR008C YDL144CQ07589 356 aa10.04□□□□□ -0.8
SOD2YHR008C DAP1Q12091 152 aa10.04□□□□□ -0.8
SOD2YHR008C AI2P03876 854 aa10.03□□□□□ -0.8
SOD2YHR008C SRP40P32583 406 aaPredicted RBP10.03□□□□□ -0.8
SOD2YHR008C JHD1P40034 492 aa10.03□□□□□ -0.8
SOD2YHR008C MCM6P53091 1017 aaKnown RBP10.03□□□□□ -0.8
SOD2YHR008C YGR125WP53273 1036 aa10.03□□□□□ -0.8
SOD2YHR008C BUL2Q03758 920 aaKnown RBP10.03□□□□□ -0.8
SOD2YHR008C PRE8P23639 250 aa10.02□□□□□ -0.81
SOD2YHR008C FOL2P51601 243 aaKnown RBP10.02□□□□□ -0.81
SOD2YHR008C SLA1P32790 1244 aa10.01□□□□□ -0.81
SOD2YHR008C SSF1P38789 453 aaPredicted RBP10.01□□□□□ -0.81
SOD2YHR008C ALD6P54115 500 aaKnown RBP10.01□□□□□ -0.81
SOD2YHR008C RPN7Q06103 429 aaKnown RBP10.01□□□□□ -0.81
SOD2YHR008C RPS19AP07280 144 aaKnown RBP10□□□□□ -0.81
SOD2YHR008C RPS19BP07281 144 aaPredicted RBP10□□□□□ -0.81
SOD2YHR008C SRM1P21827 482 aa10□□□□□ -0.81
SOD2YHR008C GRX7P38068 203 aa10□□□□□ -0.81
SOD2YHR008C PDC1P06169 563 aaKnown RBP9.99□□□□□ -0.81
SOD2YHR008C UTR4P32626 227 aa9.99□□□□□ -0.81
SOD2YHR008C GEF1P37020 779 aa9.99□□□□□ -0.81
SOD2YHR008C SOL4P53315 255 aa9.99□□□□□ -0.81
SOD2YHR008C STM1P39015 273 aaKnown RBP9.98□□□□□ -0.81
SOD2YHR008C CSI1Q04368 295 aa9.98□□□□□ -0.81
SOD2YHR008C MSC6Q08818 692 aaKnown RBP9.98□□□□□ -0.81
SOD2YHR008C LAM4P38800 1345 aa9.98□□□□□ -0.81
SOD2YHR008C VPS29P38759 282 aa9.97□□□□□ -0.81
SOD2YHR008C MAP1Q01662 387 aaKnown RBP RIP-Chip data9.97□□□□□ -0.81not detected
SOD2YHR008C RMD1Q03441 430 aa9.97□□□□□ -0.81
SOD2YHR008C SKG3Q06315 1026 aa9.97□□□□□ -0.81
SOD2YHR008C RPP0P05317 312 aaKnown RBP9.96□□□□□ -0.82
SOD2YHR008C TIM23P32897 222 aa9.96□□□□□ -0.82
SOD2YHR008C VPS53P47061 822 aa9.96□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms