RNA–Protein interactions for RNA: YER161C

SPT2, Transcript of Protein involved in negative regulation of transcription, yeast

Gene SPT2, Length 1,002 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT2	YER161C	AOS1	Q06624	347 aa		5.12	□□□□□ -1.59
SPT2	YER161C	CHS2	P14180	963 aa		5.11	□□□□□ -1.59
SPT2	YER161C	TFA2	P36145	328 aa		5.11	□□□□□ -1.59
SPT2	YER161C	CTH1	P47976	325 aa		5.11	□□□□□ -1.59
SPT2	YER161C	DSE4	P53753	1117 aa		5.11	□□□□□ -1.59
SPT2	YER161C	BOL3	P39724	118 aa		5.1	□□□□□ -1.59
SPT2	YER161C	HXT8	P40886	569 aa		5.1	□□□□□ -1.59
SPT2	YER161C	BRE4	Q07660	1125 aa		5.1	□□□□□ -1.59
SPT2	YER161C	ELM1	P32801	640 aa		5.09	□□□□□ -1.59
SPT2	YER161C	AKR1	P39010	764 aa		5.09	□□□□□ -1.59
SPT2	YER161C	YGR130C	P53278	816 aa		5.09	□□□□□ -1.59
SPT2	YER161C	SUB2	Q07478	446 aa	Known RBP	5.09	□□□□□ -1.59
SPT2	YER161C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.59	not detected
SPT2	YER161C	INP51	P40559	946 aa	Known RBP	5.08	□□□□□ -1.6
SPT2	YER161C	ALD3	P54114	506 aa		5.08	□□□□□ -1.6
SPT2	YER161C	REC8	Q12188	680 aa		5.08	□□□□□ -1.6
SPT2	YER161C	SSA1	P10591	642 aa	Known RBP	5.07	□□□□□ -1.6
SPT2	YER161C	GEF1	P37020	779 aa		5.07	□□□□□ -1.6
SPT2	YER161C	MAG2	Q06436	670 aa	Known RBP	5.07	□□□□□ -1.6
SPT2	YER161C	APC11	Q12157	165 aa		5.07	□□□□□ -1.6
SPT2	YER161C	TIF6	Q12522	245 aa	Known RBP	5.07	□□□□□ -1.6
SPT2	YER161C	NAM7	P30771	971 aa	Known RBP	5.06	□□□□□ -1.6
SPT2	YER161C	PAN5	P38787	379 aa		5.06	□□□□□ -1.6
SPT2	YER161C	AIM46	P38885	310 aa		5.06	□□□□□ -1.6
SPT2	YER161C	SPO74	P45819	413 aa		5.06	□□□□□ -1.6
SPT2	YER161C	CYC7	P00045	113 aa		5.05	□□□□□ -1.6
SPT2	YER161C	NAP1	P25293	417 aa	Known RBP	5.05	□□□□□ -1.6
SPT2	YER161C	LEM3	P42838	414 aa		5.05	□□□□□ -1.6
SPT2	YER161C	GUP1	P53154	560 aa		5.04	□□□□□ -1.6
SPT2	YER161C	BIO5	P53744	561 aa	Known RBP	5.04	□□□□□ -1.6
SPT2	YER161C	LSO1	Q3E827	93 aa		5.04	□□□□□ -1.6
SPT2	YER161C	RRN6	P32786	894 aa		5.03	□□□□□ -1.6
SPT2	YER161C	RAD55	P38953	406 aa		5.03	□□□□□ -1.6
SPT2	YER161C	FIR1	P40020	876 aa		5.03	□□□□□ -1.6
SPT2	YER161C	IOC4	Q04213	475 aa		5.03	□□□□□ -1.6
SPT2	YER161C	NOP8	Q08287	484 aa	Predicted RBP	5.03	□□□□□ -1.6
SPT2	YER161C	SOG2	Q08817	791 aa		5.03	□□□□□ -1.6
SPT2	YER161C	MSB1	P21339	1137 aa	Known RBP	5.02	□□□□□ -1.61
SPT2	YER161C	NTA1	P40354	457 aa		5.02	□□□□□ -1.61
SPT2	YER161C	FUS1	P11710	512 aa		5.01	□□□□□ -1.61
SPT2	YER161C	ERS1	P17261	260 aa		5.01	□□□□□ -1.61
SPT2	YER161C	YBR287W	P38355	427 aa		5.01	□□□□□ -1.61
SPT2	YER161C	PSY2	P40164	858 aa		5.01	□□□□□ -1.61
SPT2	YER161C	NOP7	P53261	605 aa	Known RBP	5.01	□□□□□ -1.61
SPT2	YER161C	FUR4	P05316	633 aa	Known RBP	5	□□□□□ -1.61
SPT2	YER161C	PYC2	P32327	1180 aa	Known RBP	5	□□□□□ -1.61
SPT2	YER161C	MAE1	P36013	669 aa	Known RBP	5	□□□□□ -1.61
SPT2	YER161C	POL5	P39985	1022 aa	Known RBP	5	□□□□□ -1.61
SPT2	YER161C	YJR124C	P47159	448 aa		5	□□□□□ -1.61
SPT2	YER161C	YNR065C	P53751	1116 aa		5	□□□□□ -1.61
SPT2	YER161C	ORC1	P54784	914 aa	Predicted RBP	5	□□□□□ -1.61
SPT2	YER161C	COB	P00163	385 aa		4.99	□□□□□ -1.61
SPT2	YER161C	NEO1	P40527	1151 aa		4.99	□□□□□ -1.61
SPT2	YER161C	NCE103	P53615	221 aa		4.99	□□□□□ -1.61
SPT2	YER161C	CTR9	P89105	1077 aa		4.99	□□□□□ -1.61
SPT2	YER161C	IRS4	P36115	615 aa	Known RBP	4.98	□□□□□ -1.61
SPT2	YER161C	SPO71	Q03868	1245 aa		4.98	□□□□□ -1.61
SPT2	YER161C	GLO4	Q12320	285 aa		4.98	□□□□□ -1.61
SPT2	YER161C	HVG1	P0CE11	249 aa		4.97	□□□□□ -1.61
SPT2	YER161C	DUR3	P33413	735 aa		4.97	□□□□□ -1.61
SPT2	YER161C	SEA4	P38164	1038 aa		4.97	□□□□□ -1.61
SPT2	YER161C	GLO3	P38682	493 aa	Known RBP	4.97	□□□□□ -1.61
SPT2	YER161C	UBP5	P39944	805 aa		4.97	□□□□□ -1.61
SPT2	YER161C	HAS1	Q03532	505 aa	Known RBP	4.97	□□□□□ -1.61
SPT2	YER161C	ELG1	Q12050	791 aa		4.97	□□□□□ -1.61
SPT2	YER161C	QDR1	P40475	563 aa		4.96	□□□□□ -1.62
SPT2	YER161C	KIP3	P53086	805 aa	Known RBP	4.96	□□□□□ -1.62
SPT2	YER161C	KAR5	Q04746	504 aa		4.96	□□□□□ -1.62
SPT2	YER161C	SLD2	P34252	453 aa		4.95	□□□□□ -1.62
SPT2	YER161C	RPL34A	P87262	121 aa	Predicted RBP	4.95	□□□□□ -1.62
SPT2	YER161C	RNQ1	P25367	405 aa		4.94	□□□□□ -1.62
SPT2	YER161C	SMC1	P32908	1225 aa		4.94	□□□□□ -1.62
SPT2	YER161C	SDH1	Q00711	640 aa		4.94	□□□□□ -1.62
SPT2	YER161C	GIC2	Q06648	383 aa		4.94	□□□□□ -1.62
SPT2	YER161C	NIT1	P40447	199 aa		4.93	□□□□□ -1.62
SPT2	YER161C	SEG2	P34250	1132 aa		4.92	□□□□□ -1.62
SPT2	YER161C	LRG1	P35688	1017 aa		4.92	□□□□□ -1.62
SPT2	YER161C	ECL1	P48235	211 aa		4.92	□□□□□ -1.62
SPT2	YER161C	MET10	P39692	1035 aa		4.91	□□□□□ -1.62
SPT2	YER161C	FET4	P40988	552 aa		4.91	□□□□□ -1.62
SPT2	YER161C	SNU71	P53207	620 aa	Known RBP	4.91	□□□□□ -1.62
SPT2	YER161C	GCD1	P09032	578 aa	Predicted RBP	4.9	□□□□□ -1.63
SPT2	YER161C	POL12	P38121	705 aa	Predicted RBP	4.9	□□□□□ -1.63
SPT2	YER161C	FAR11	P53917	953 aa		4.9	□□□□□ -1.63
SPT2	YER161C	MNL2	Q12205	849 aa		4.9	□□□□□ -1.63
SPT2	YER161C	CMR1	Q12510	522 aa	Known RBP	4.89	□□□□□ -1.63
SPT2	YER161C	DFG16	Q99234	619 aa		4.89	□□□□□ -1.63
SPT2	YER161C	TRL1	P09880	827 aa	Known RBP	4.88	□□□□□ -1.63
SPT2	YER161C	RIM11	P38615	370 aa		4.88	□□□□□ -1.63
SPT2	YER161C	MMM1	P41800	426 aa		4.88	□□□□□ -1.63
SPT2	YER161C	RSC4	Q02206	625 aa		4.88	□□□□□ -1.63
SPT2	YER161C	YOR223W	Q12015	292 aa		4.88	□□□□□ -1.63
SPT2	YER161C	NPR1	P22211	790 aa		4.87	□□□□□ -1.63
SPT2	YER161C	WHI3	P34761	661 aa	Known RBP	4.87	□□□□□ -1.63
SPT2	YER161C	GPT2	P36148	743 aa		4.87	□□□□□ -1.63
SPT2	YER161C	GRS1	P38088	690 aa	Known RBP	4.87	□□□□□ -1.63
SPT2	YER161C	ATG1	P53104	897 aa		4.87	□□□□□ -1.63
SPT2	YER161C	PRP43	P53131	767 aa	Known RBP	4.87	□□□□□ -1.63
SPT2	YER161C	YMR074C	Q04773	145 aa		4.87	□□□□□ -1.63
SPT2	YER161C	GPI13	Q07830	1017 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 61.2 ms