RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C CWC15Q03772 175 aaKnown RBP5.33□□□□□ -1.56
VAB2YEL005C SOK2P53438 785 aaPredicted RBP5.32□□□□□ -1.56
VAB2YEL005C FOX2Q02207 900 aaKnown RBP5.32□□□□□ -1.56
VAB2YEL005C SSF1P38789 453 aaPredicted RBP5.31□□□□□ -1.56
VAB2YEL005C YBL113CQ7M4S9 792 aa5.31□□□□□ -1.56
VAB2YEL005C SCD5P34758 872 aa5.3□□□□□ -1.56
VAB2YEL005C ITC1P53125 1264 aa5.3□□□□□ -1.56
VAB2YEL005C POL12P38121 705 aaPredicted RBP5.29□□□□□ -1.56
VAB2YEL005C GLO3P38682 493 aaKnown RBP5.29□□□□□ -1.56
VAB2YEL005C HXT5P38695 592 aa5.29□□□□□ -1.56
VAB2YEL005C NIT1P40447 199 aa5.29□□□□□ -1.56
VAB2YEL005C TAF1P46677 1066 aa5.29□□□□□ -1.56
VAB2YEL005C DSE4P53753 1117 aa5.29□□□□□ -1.56
VAB2YEL005C ESC8Q08119 714 aa5.29□□□□□ -1.56
VAB2YEL005C GRS1P38088 690 aaKnown RBP5.28□□□□□ -1.56
VAB2YEL005C STM1P39015 273 aaKnown RBP5.28□□□□□ -1.56
VAB2YEL005C YER156CP40093 338 aaKnown RBP5.28□□□□□ -1.56
VAB2YEL005C MSB1P21339 1137 aaKnown RBP5.27□□□□□ -1.57
VAB2YEL005C QDR2P40474 542 aa5.27□□□□□ -1.57
VAB2YEL005C NOP8Q08287 484 aaPredicted RBP5.27□□□□□ -1.57
VAB2YEL005C SEC20P28791 383 aa5.26□□□□□ -1.57
VAB2YEL005C SUV3P32580 737 aa5.26□□□□□ -1.57
VAB2YEL005C ISC10P32645 267 aa5.26□□□□□ -1.57
VAB2YEL005C ERP5P38819 212 aa5.26□□□□□ -1.57
VAB2YEL005C BOL3P39724 118 aa5.26□□□□□ -1.57
VAB2YEL005C QDR1P40475 563 aa5.26□□□□□ -1.57
VAB2YEL005C ATG1P53104 897 aa5.26□□□□□ -1.57
VAB2YEL005C YBR197CP38306 217 aa5.25□□□□□ -1.57
VAB2YEL005C CAB1Q04430 367 aa5.25□□□□□ -1.57
VAB2YEL005C DFG16Q99234 619 aa5.24□□□□□ -1.57
VAB2YEL005C GCD1P09032 578 aaPredicted RBP5.23□□□□□ -1.57
VAB2YEL005C GAS1P22146 559 aaKnown RBP5.23□□□□□ -1.57
VAB2YEL005C GIP4P39732 760 aa5.23□□□□□ -1.57
VAB2YEL005C THI12P42883 340 aa5.23□□□□□ -1.57
VAB2YEL005C THI5P43534 340 aa5.23□□□□□ -1.57
VAB2YEL005C THI11P47183 340 aa5.23□□□□□ -1.57
VAB2YEL005C ECL1P48235 211 aa5.23□□□□□ -1.57
VAB2YEL005C THI13Q07748 340 aa5.23□□□□□ -1.57
VAB2YEL005C MRPL33P20084 86 aa5.22□□□□□ -1.57
VAB2YEL005C YHL050CP38721 697 aa5.22□□□□□ -1.57
VAB2YEL005C YHR219WP38900 624 aa5.22□□□□□ -1.57
VAB2YEL005C ACF4P47129 309 aa5.22□□□□□ -1.57
VAB2YEL005C LSO1Q3E827 93 aa5.22□□□□□ -1.57
VAB2YEL005C LDH1P38139 375 aa5.21□□□□□ -1.58
VAB2YEL005C DYS1P38791 387 aa5.21□□□□□ -1.58
VAB2YEL005C FIR1P40020 876 aa5.21□□□□□ -1.58
VAB2YEL005C YJL181WP46987 611 aa5.21□□□□□ -1.58
VAB2YEL005C SUT1P53032 299 aaKnown RBP5.21□□□□□ -1.58
VAB2YEL005C YBR287WP38355 427 aa5.2□□□□□ -1.58
VAB2YEL005C PAN5P38787 379 aa5.2□□□□□ -1.58
VAB2YEL005C PRP43P53131 767 aaKnown RBP5.2□□□□□ -1.58
VAB2YEL005C UFD2P54860 961 aa5.2□□□□□ -1.58
VAB2YEL005C TRL1P09880 827 aaKnown RBP5.19□□□□□ -1.58
VAB2YEL005C HEM3P28789 327 aa5.19□□□□□ -1.58
VAB2YEL005C NCE103P53615 221 aa5.19□□□□□ -1.58
VAB2YEL005C MSC6Q08818 692 aaKnown RBP5.19□□□□□ -1.58
VAB2YEL005C VMA3P25515 160 aa5.18□□□□□ -1.58
VAB2YEL005C ASF1P32447 279 aa5.18□□□□□ -1.58
VAB2YEL005C YHL008CP38750 627 aa5.18□□□□□ -1.58
VAB2YEL005C IPL1P38991 367 aa5.18□□□□□ -1.58
VAB2YEL005C HXT8P40886 569 aa5.18□□□□□ -1.58
VAB2YEL005C MDJ2P42834 146 aa5.18□□□□□ -1.58
VAB2YEL005C SEN54Q02825 467 aaPredicted RBP5.18□□□□□ -1.58
VAB2YEL005C YOR296WQ08748 1289 aa5.18□□□□□ -1.58
VAB2YEL005C RPB10P22139 70 aa5.17□□□□□ -1.58
VAB2YEL005C SMC1P32908 1225 aa5.17□□□□□ -1.58
VAB2YEL005C BSD2P38356 321 aa5.17□□□□□ -1.58
VAB2YEL005C TRS120Q04183 1289 aa5.17□□□□□ -1.58
VAB2YEL005C CDA2Q06703 312 aa5.17□□□□□ -1.58
VAB2YEL005C BOI1P38041 980 aaKnown RBP5.16□□□□□ -1.58
VAB2YEL005C PPX1P38698 397 aa5.16□□□□□ -1.58
VAB2YEL005C PPT1P53043 513 aa5.16□□□□□ -1.58
VAB2YEL005C APC11Q12157 165 aa5.16□□□□□ -1.58
VAB2YEL005C ISW1P38144 1129 aa5.15□□□□□ -1.59
VAB2YEL005C NUT2Q06213 157 aa5.15□□□□□ -1.59
VAB2YEL005C RAD55P38953 406 aa5.14□□□□□ -1.59
VAB2YEL005C YNR065CP53751 1116 aa5.14□□□□□ -1.59
VAB2YEL005C TSA1P34760 196 aaKnown RBP5.13□□□□□ -1.59
VAB2YEL005C THI80P35202 319 aa5.13□□□□□ -1.59
VAB2YEL005C GIP1P38229 639 aa5.13□□□□□ -1.59
VAB2YEL005C POL5P39985 1022 aaKnown RBP5.13□□□□□ -1.59
VAB2YEL005C RSC2Q06488 889 aa5.13□□□□□ -1.59
VAB2YEL005C FRT1Q99332 602 aa5.13□□□□□ -1.59
VAB2YEL005C GCD6P32501 712 aaKnown RBP5.12□□□□□ -1.59
VAB2YEL005C MAE1P36013 669 aaKnown RBP5.12□□□□□ -1.59
VAB2YEL005C MGE1P38523 228 aa5.12□□□□□ -1.59
VAB2YEL005C POL32P47110 350 aa5.12□□□□□ -1.59
VAB2YEL005C MSN1P22148 382 aa5.11□□□□□ -1.59
VAB2YEL005C ECM2P38241 364 aaKnown RBP5.11□□□□□ -1.59
VAB2YEL005C INP51P40559 946 aaKnown RBP5.11□□□□□ -1.59
VAB2YEL005C SAM37P50110 327 aa5.11□□□□□ -1.59
VAB2YEL005C SNU71P53207 620 aaKnown RBP5.11□□□□□ -1.59
VAB2YEL005C GIC2Q06648 383 aa5.11□□□□□ -1.59
VAB2YEL005C TFA2P36145 328 aa5.1□□□□□ -1.59
VAB2YEL005C YNL011CP53980 444 aa5.1□□□□□ -1.59
VAB2YEL005C IRS4P36115 615 aaKnown RBP5.09□□□□□ -1.59
VAB2YEL005C CIC1P38779 376 aaKnown RBP5.09□□□□□ -1.59
VAB2YEL005C AIM46P38885 310 aa5.09□□□□□ -1.59
VAB2YEL005C NTA1P40354 457 aa5.09□□□□□ -1.59
VAB2YEL005C NOP7P53261 605 aaKnown RBP5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms