RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W LEM3P42838 414 aa4.03□□□□□ -1.76
SNX41YDR425W CCT8P47079 568 aaKnown RBP4.03□□□□□ -1.76
SNX41YDR425W GUP1P53154 560 aa4.03□□□□□ -1.76
SNX41YDR425W YNL011CP53980 444 aa4.03□□□□□ -1.76
SNX41YDR425W CDC55Q00362 526 aa4.03□□□□□ -1.76
SNX41YDR425W FRT1Q99332 602 aa4.03□□□□□ -1.76
SNX41YDR425W NUT2Q06213 157 aa4.03□□□□□ -1.77
SNX41YDR425W TY4B-PA0A0B7P3V8 1104 aa4.02□□□□□ -1.77
SNX41YDR425W GIP2P40036 548 aa4.02□□□□□ -1.77
SNX41YDR425W YJL181WP46987 611 aa4.02□□□□□ -1.77
SNX41YDR425W BUD9P53226 547 aa4.02□□□□□ -1.77
SNX41YDR425W GLO4Q12320 285 aa4.02□□□□□ -1.77
SNX41YDR425W TY4A-HQ6Q5P6 413 aa4.02□□□□□ -1.77
SNX41YDR425W COBP00163 385 aa4.01□□□□□ -1.77
SNX41YDR425W MSH6Q03834 1242 aa4.01□□□□□ -1.77
SNX41YDR425W GPI13Q07830 1017 aa4.01□□□□□ -1.77
SNX41YDR425W AI3P03877 415 aa4.01□□□□□ -1.77
SNX41YDR425W SFA1P32771 386 aa4.01□□□□□ -1.77
SNX41YDR425W SLN1P39928 1220 aaPredicted RBP4.01□□□□□ -1.77
SNX41YDR425W LSB3P43603 459 aaKnown RBP4.01□□□□□ -1.77
SNX41YDR425W SOK2P53438 785 aaPredicted RBP4.01□□□□□ -1.77
SNX41YDR425W BSC2Q05611 235 aa4.01□□□□□ -1.77
SNX41YDR425W PPX1P38698 397 aa4□□□□□ -1.77
SNX41YDR425W STM1P39015 273 aaKnown RBP4□□□□□ -1.77
SNX41YDR425W YJR124CP47159 448 aa4□□□□□ -1.77
SNX41YDR425W YNR065CP53751 1116 aa4□□□□□ -1.77
SNX41YDR425W PRP5P21372 849 aaPredicted RBP3.99□□□□□ -1.77
SNX41YDR425W RIM11P38615 370 aa3.99□□□□□ -1.77
SNX41YDR425W YHL050CP38721 697 aa3.99□□□□□ -1.77
SNX41YDR425W RRM3P38766 723 aa3.99□□□□□ -1.77
SNX41YDR425W YHR219WP38900 624 aa3.99□□□□□ -1.77
SNX41YDR425W TED1P40533 473 aa3.99□□□□□ -1.77
SNX41YDR425W SAP155P43612 1002 aa3.99□□□□□ -1.77
SNX41YDR425W PRY1P47032 299 aa3.99□□□□□ -1.77
SNX41YDR425W FLP1P03870 423 aa3.98□□□□□ -1.77
SNX41YDR425W DUR3P33413 735 aa3.98□□□□□ -1.77
SNX41YDR425W PAN5P38787 379 aa3.98□□□□□ -1.77
SNX41YDR425W MSC6Q08818 692 aaKnown RBP3.98□□□□□ -1.77
SNX41YDR425W PGM1P33401 570 aaKnown RBP3.98□□□□□ -1.77
SNX41YDR425W POL5P39985 1022 aaKnown RBP3.98□□□□□ -1.77
SNX41YDR425W DSE4P53753 1117 aa3.98□□□□□ -1.77
SNX41YDR425W SEN54Q02825 467 aaPredicted RBP3.98□□□□□ -1.77
SNX41YDR425W TY1A-NL1Q12391 440 aaKnown RBP3.98□□□□□ -1.77
SNX41YDR425W SAC7P17121 654 aa3.97□□□□□ -1.77
SNX41YDR425W TAT1P38085 619 aa3.97□□□□□ -1.77
SNX41YDR425W ARI1P53111 347 aaKnown RBP3.97□□□□□ -1.77
SNX41YDR425W HAS1Q03532 505 aaKnown RBP3.97□□□□□ -1.77
SNX41YDR425W SPO71Q03868 1245 aa3.97□□□□□ -1.77
SNX41YDR425W CMR1Q12510 522 aaKnown RBP3.97□□□□□ -1.77
SNX41YDR425W NPR1P22211 790 aa3.96□□□□□ -1.77
SNX41YDR425W FET4P40988 552 aa3.96□□□□□ -1.77
SNX41YDR425W LSB6P42951 607 aa3.96□□□□□ -1.77
SNX41YDR425W SAM37P50110 327 aa3.96□□□□□ -1.77
SNX41YDR425W GAS5Q08193 484 aa3.96□□□□□ -1.77
SNX41YDR425W GLT1Q12680 2145 aaKnown RBP3.96□□□□□ -1.78
SNX41YDR425W SEC20P28791 383 aa3.96□□□□□ -1.78
SNX41YDR425W NUT1P53114 1132 aa3.96□□□□□ -1.78
SNX41YDR425W NOP8Q08287 484 aaPredicted RBP3.96□□□□□ -1.78
SNX41YDR425W MCA1Q08601 432 aa3.96□□□□□ -1.78
SNX41YDR425W PHO4P07270 312 aaKnown RBP3.95□□□□□ -1.78
SNX41YDR425W MET4P32389 672 aa3.95□□□□□ -1.78
SNX41YDR425W YHL008CP38750 627 aa3.95□□□□□ -1.78
SNX41YDR425W YPL034WQ03083 165 aa3.95□□□□□ -1.78
SNX41YDR425W NOC3Q07896 663 aaPredicted RBP3.95□□□□□ -1.78
SNX41YDR425W WHI5Q12416 295 aa3.95□□□□□ -1.78
SNX41YDR425W CIC1P38779 376 aaKnown RBP3.94□□□□□ -1.78
SNX41YDR425W PMT7Q06644 662 aa3.94□□□□□ -1.78
SNX41YDR425W INP54Q08227 384 aaKnown RBP3.94□□□□□ -1.78
SNX41YDR425W YIG1Q08956 461 aa3.94□□□□□ -1.78
SNX41YDR425W ELG1Q12050 791 aa3.94□□□□□ -1.78
SNX41YDR425W HTS1P07263 546 aaKnown RBP3.94□□□□□ -1.78
SNX41YDR425W RSC6P25632 483 aa3.94□□□□□ -1.78
SNX41YDR425W VPS35P34110 944 aa3.94□□□□□ -1.78
SNX41YDR425W MAE1P36013 669 aaKnown RBP3.94□□□□□ -1.78
SNX41YDR425W ECM2P38241 364 aaKnown RBP3.94□□□□□ -1.78
SNX41YDR425W NEO1P40527 1151 aa3.94□□□□□ -1.78
SNX41YDR425W GCD6P32501 712 aaKnown RBP3.93□□□□□ -1.78
SNX41YDR425W GCV1P48015 400 aa3.93□□□□□ -1.78
SNX41YDR425W NCE103P53615 221 aa3.93□□□□□ -1.78
SNX41YDR425W YAF9P53930 226 aa3.93□□□□□ -1.78
SNX41YDR425W YML020WQ03722 664 aa3.93□□□□□ -1.78
SNX41YDR425W YCS4Q06156 1176 aa3.93□□□□□ -1.78
SNX41YDR425W RVS167P39743 482 aaKnown RBP3.92□□□□□ -1.78
SNX41YDR425W REC8Q12188 680 aa3.92□□□□□ -1.78
SNX41YDR425W ERS1P17261 260 aa3.92□□□□□ -1.78
SNX41YDR425W SLD2P34252 453 aa3.92□□□□□ -1.78
SNX41YDR425W IPL1P38991 367 aa3.92□□□□□ -1.78
SNX41YDR425W FAR11P53917 953 aa3.92□□□□□ -1.78
SNX41YDR425W DAK2P43550 591 aa3.91□□□□□ -1.78
SNX41YDR425W ARL1P38116 183 aaKnown RBP3.9□□□□□ -1.78
SNX41YDR425W NOG1Q02892 647 aaKnown RBP3.9□□□□□ -1.78
SNX41YDR425W MCM5P29496 775 aaKnown RBP3.9□□□□□ -1.79
SNX41YDR425W SAF1P38352 637 aa3.9□□□□□ -1.79
SNX41YDR425W KIP3P53086 805 aaKnown RBP3.9□□□□□ -1.79
SNX41YDR425W UTP22P53254 1237 aaPredicted RBP3.9□□□□□ -1.79
SNX41YDR425W MEC3Q02574 474 aa3.9□□□□□ -1.79
SNX41YDR425W PRP40P33203 583 aaKnown RBP3.89□□□□□ -1.79
SNX41YDR425W MON1P53129 644 aa3.89□□□□□ -1.79
SNX41YDR425W YOR223WQ12015 292 aa3.89□□□□□ -1.79
SNX41YDR425W YLL054CQ12244 843 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms