RNA–Protein interactions for RNA: YDR340W

YDR340W, Transcript of Putative protein of unknown function, yeast

Gene YDR340W, Length 303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR340W	YDR340W	SSB1	P11484	613 aa	Known RBP	4.67	□□□□□ -1.66
YDR340W	YDR340W	MCM5	P29496	775 aa	Known RBP	4.67	□□□□□ -1.66
YDR340W	YDR340W	UGA4	P32837	571 aa		4.67	□□□□□ -1.66
YDR340W	YDR340W	SSB2	P40150	613 aa	Known RBP	4.67	□□□□□ -1.66
YDR340W	YDR340W	YJR142W	P47173	342 aa		4.67	□□□□□ -1.66
YDR340W	YDR340W	YGR053C	P53234	283 aa		4.67	□□□□□ -1.66
YDR340W	YDR340W	FAL1	Q12099	399 aa	Known RBP	4.67	□□□□□ -1.66
YDR340W	YDR340W	PHO8	P11491	566 aa		4.66	□□□□□ -1.66
YDR340W	YDR340W	AMS1	P22855	1083 aa		4.66	□□□□□ -1.66
YDR340W	YDR340W	TIM23	P32897	222 aa		4.66	□□□□□ -1.66
YDR340W	YDR340W	YKL069W	P36088	180 aa		4.66	□□□□□ -1.66
YDR340W	YDR340W	ECM2	P38241	364 aa	Known RBP	4.66	□□□□□ -1.66
YDR340W	YDR340W	YBR287W	P38355	427 aa		4.66	□□□□□ -1.66
YDR340W	YDR340W	YJR115W	P47152	169 aa		4.66	□□□□□ -1.66
YDR340W	YDR340W	MON1	P53129	644 aa		4.66	□□□□□ -1.66
YDR340W	YDR340W	TYW3	P53177	273 aa		4.66	□□□□□ -1.66
YDR340W	YDR340W	ULP1	Q02724	621 aa		4.66	□□□□□ -1.66
YDR340W	YDR340W	YPL109C	Q02981	657 aa		4.66	□□□□□ -1.66
YDR340W	YDR340W	ADI1	Q03677	179 aa		4.66	□□□□□ -1.66
YDR340W	YDR340W	UTP14	Q04500	899 aa	Known RBP	4.66	□□□□□ -1.66
YDR340W	YDR340W	PPM2	Q08282	695 aa		4.66	□□□□□ -1.66
YDR340W	YDR340W	CCP1	P00431	361 aa		4.65	□□□□□ -1.67
YDR340W	YDR340W	GCR1	P07261	785 aa		4.65	□□□□□ -1.67
YDR340W	YDR340W	TRK1	P12685	1235 aa		4.65	□□□□□ -1.67
YDR340W	YDR340W	BAS1	P22035	811 aa		4.65	□□□□□ -1.67
YDR340W	YDR340W	GRX4	P32642	244 aa		4.65	□□□□□ -1.67
YDR340W	YDR340W	DUT1	P33317	147 aa		4.65	□□□□□ -1.67
YDR340W	YDR340W	ISW1	P38144	1129 aa		4.65	□□□□□ -1.67
YDR340W	YDR340W	CHZ1	P40019	153 aa	Predicted RBP	4.65	□□□□□ -1.67
YDR340W	YDR340W	MSH4	P40965	878 aa	Predicted RBP	4.65	□□□□□ -1.67
YDR340W	YDR340W	RTT10	Q08924	1013 aa		4.65	□□□□□ -1.67
YDR340W	YDR340W	THI4	P32318	326 aa		4.64	□□□□□ -1.67
YDR340W	YDR340W	KAP122	P32767	1081 aa		4.64	□□□□□ -1.67
YDR340W	YDR340W	GIP1	P38229	639 aa		4.64	□□□□□ -1.67
YDR340W	YDR340W	BSD2	P38356	321 aa		4.64	□□□□□ -1.67
YDR340W	YDR340W	PIC2	P40035	300 aa		4.64	□□□□□ -1.67
YDR340W	YDR340W	YTA6	P40328	754 aa		4.64	□□□□□ -1.67
YDR340W	YDR340W	YGL081W	P53156	320 aa		4.64	□□□□□ -1.67
YDR340W	YDR340W	FLC1	Q08967	793 aa		4.64	□□□□□ -1.67
YDR340W	YDR340W	YLR125W	Q12138	136 aa		4.64	□□□□□ -1.67
YDR340W	YDR340W	SDH2	P21801	266 aa		4.63	□□□□□ -1.67
YDR340W	YDR340W	YHR020W	P38708	688 aa	Known RBP	4.63	□□□□□ -1.67
YDR340W	YDR340W	AIM46	P38885	310 aa		4.63	□□□□□ -1.67
YDR340W	YDR340W	RSP5	P39940	809 aa	Known RBP	4.63	□□□□□ -1.67
YDR340W	YDR340W	YGR125W	P53273	1036 aa		4.63	□□□□□ -1.67
YDR340W	YDR340W	MRL1	Q06815	381 aa		4.63	□□□□□ -1.67
YDR340W	YDR340W	OSH2	Q12451	1283 aa		4.63	□□□□□ -1.67
YDR340W	YDR340W	SRM1	P21827	482 aa		4.62	□□□□□ -1.67
YDR340W	YDR340W	RAD27	P26793	382 aa		4.62	□□□□□ -1.67
YDR340W	YDR340W	SQT1	P35184	431 aa		4.62	□□□□□ -1.67
YDR340W	YDR340W	JJJ2	P46997	583 aa		4.62	□□□□□ -1.67
YDR340W	YDR340W	NUT1	P53114	1132 aa		4.62	□□□□□ -1.67
YDR340W	YDR340W	CTR9	P89105	1077 aa		4.62	□□□□□ -1.67
YDR340W	YDR340W	SPO75	Q07798	868 aa		4.62	□□□□□ -1.67
YDR340W	YDR340W	YOR296W	Q08748	1289 aa		4.62	□□□□□ -1.67
YDR340W	YDR340W	TMA46	Q12000	345 aa	Known RBP	4.62	□□□□□ -1.67
YDR340W	YDR340W	COB	P00163	385 aa		4.61	□□□□□ -1.67
YDR340W	YDR340W	RPS31	P05759	152 aa	Known RBP	4.61	□□□□□ -1.67
YDR340W	YDR340W	ERR1	P0CX10	437 aa		4.61	□□□□□ -1.67
YDR340W	YDR340W	ERR2	P0CX11	437 aa		4.61	□□□□□ -1.67
YDR340W	YDR340W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
YDR340W	YDR340W	YBR184W	P38299	523 aa		4.61	□□□□□ -1.67
YDR340W	YDR340W	SSN3	P39073	555 aa		4.61	□□□□□ -1.67
YDR340W	YDR340W	UBP12	P39538	1254 aa		4.61	□□□□□ -1.67
YDR340W	YDR340W	RVS167	P39743	482 aa	Known RBP	4.61	□□□□□ -1.67
YDR340W	YDR340W	YEN1	P40028	759 aa		4.61	□□□□□ -1.67
YDR340W	YDR340W	XKS1	P42826	600 aa		4.61	□□□□□ -1.67
YDR340W	YDR340W	RSM26	P47141	266 aa		4.61	□□□□□ -1.67
YDR340W	YDR340W	EEB1	Q02891	456 aa		4.61	□□□□□ -1.67
YDR340W	YDR340W	EMG1	Q06287	252 aa	Known RBP	4.61	□□□□□ -1.67
YDR340W	YDR340W	RPC31	P17890	251 aa		4.6	□□□□□ -1.67
YDR340W	YDR340W	GAL11	P19659	1081 aa		4.6	□□□□□ -1.67
YDR340W	YDR340W	SHM1	P37292	490 aa	Predicted RBP	4.6	□□□□□ -1.67
YDR340W	YDR340W	CRP1	P38845	465 aa	Known RBP	4.6	□□□□□ -1.67
YDR340W	YDR340W	SUB1	P54000	292 aa	Known RBP	4.6	□□□□□ -1.67
YDR340W	YDR340W	DNM1	P54861	757 aa		4.6	□□□□□ -1.67
YDR340W	YDR340W	HSP60	P19882	572 aa	Known RBP	4.59	□□□□□ -1.67
YDR340W	YDR340W	PYC2	P32327	1180 aa	Known RBP	4.59	□□□□□ -1.67
YDR340W	YDR340W	IRE1	P32361	1115 aa		4.59	□□□□□ -1.67
YDR340W	YDR340W	STE5	P32917	917 aa		4.59	□□□□□ -1.67
YDR340W	YDR340W	DUR3	P33413	735 aa		4.59	□□□□□ -1.67
YDR340W	YDR340W	GGA2	P38817	585 aa	Known RBP	4.59	□□□□□ -1.67
YDR340W	YDR340W	KRI1	P42846	591 aa	Known RBP	4.59	□□□□□ -1.67
YDR340W	YDR340W	KRE33	P53914	1056 aa	Known RBP	4.59	□□□□□ -1.67
YDR340W	YDR340W	MSH6	Q03834	1242 aa		4.59	□□□□□ -1.67
YDR340W	YDR340W	CIT1	P00890	479 aa		4.58	□□□□□ -1.68
YDR340W	YDR340W	RPL8B	P29453	256 aa	Known RBP	4.58	□□□□□ -1.68
YDR340W	YDR340W	AHP1	P38013	176 aa	Known RBP	4.58	□□□□□ -1.68
YDR340W	YDR340W	PEX28	P38848	579 aa		4.58	□□□□□ -1.68
YDR340W	YDR340W	MSN5	P52918	1224 aa		4.58	□□□□□ -1.68
YDR340W	YDR340W	PEX13	P80667	386 aa		4.58	□□□□□ -1.68
YDR340W	YDR340W	CUS1	Q02554	436 aa	Predicted RBP	4.58	□□□□□ -1.68
YDR340W	YDR340W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
YDR340W	YDR340W	HED1	Q03937	162 aa		4.58	□□□□□ -1.68
YDR340W	YDR340W	SPO20	Q04359	397 aa		4.58	□□□□□ -1.68
YDR340W	YDR340W	PMT7	Q06644	662 aa		4.58	□□□□□ -1.68
YDR340W	YDR340W	YOL057W	Q08225	711 aa		4.58	□□□□□ -1.68
YDR340W	YDR340W	NOP14	Q99207	810 aa	Known RBP	4.58	□□□□□ -1.68
YDR340W	YDR340W	ADR1	P07248	1323 aa		4.57	□□□□□ -1.68
YDR340W	YDR340W	CAN1	P04817	590 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms