RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W GAL11P19659 1081 aa1.79□□□□□ -2.12
MSN5YDR335W FPR3P38911 411 aaKnown RBP1.79□□□□□ -2.12
MSN5YDR335W DNF3Q12674 1656 aa1.79□□□□□ -2.12
MSN5YDR335W TPO2P53283 614 aa1.79□□□□□ -2.12
MSN5YDR335W PNP1Q05788 311 aa1.79□□□□□ -2.12
MSN5YDR335W CHC1P22137 1653 aaKnown RBP1.79□□□□□ -2.12
MSN5YDR335W TY1B-JR2P47100 1755 aaKnown RBP1.78□□□□□ -2.12
MSN5YDR335W TY1B-ER2Q03619 1755 aa1.78□□□□□ -2.12
MSN5YDR335W TY1B-MR1Q04214 1755 aa1.78□□□□□ -2.12
MSN5YDR335W TY1B-MR2Q04670 1755 aaKnown RBP1.78□□□□□ -2.12
MSN5YDR335W TY1B-LR1Q12088 1755 aaKnown RBP1.78□□□□□ -2.12
MSN5YDR335W TY1B-NL1Q12112 1755 aa1.78□□□□□ -2.12
MSN5YDR335W TY1B-GR1Q12141 1755 aa1.78□□□□□ -2.12
MSN5YDR335W TY1B-BLQ12490 1755 aa1.78□□□□□ -2.12
MSN5YDR335W MRP10O75012 95 aa1.78□□□□□ -2.12
MSN5YDR335W SRM1P21827 482 aa1.78□□□□□ -2.12
MSN5YDR335W THI4P32318 326 aa1.78□□□□□ -2.12
MSN5YDR335W TIM54P47045 478 aa1.78□□□□□ -2.12
MSN5YDR335W TRM3Q07527 1436 aa1.78□□□□□ -2.12
MSN5YDR335W VPS15P22219 1454 aa1.78□□□□□ -2.12
MSN5YDR335W FBP26P32604 452 aa1.78□□□□□ -2.12
MSN5YDR335W RPT1P33299 467 aaKnown RBP1.78□□□□□ -2.12
MSN5YDR335W NTH2P35172 780 aa1.78□□□□□ -2.12
MSN5YDR335W CSE4P36012 229 aa1.78□□□□□ -2.12
MSN5YDR335W AIM9P40053 627 aaKnown RBP1.78□□□□□ -2.12
MSN5YDR335W TPM2P40414 161 aa1.78□□□□□ -2.12
MSN5YDR335W MAG2Q06436 670 aaKnown RBP1.78□□□□□ -2.12
MSN5YDR335W WHI5Q12416 295 aa1.78□□□□□ -2.12
MSN5YDR335W YHL008CP38750 627 aa1.78□□□□□ -2.13
MSN5YDR335W RPS26AP39938 119 aaKnown RBP1.78□□□□□ -2.13
MSN5YDR335W RPS26BP39939 119 aaKnown RBP1.78□□□□□ -2.13
MSN5YDR335W MTO1P53070 669 aa1.78□□□□□ -2.13
MSN5YDR335W HUL5P53119 910 aa1.78□□□□□ -2.13
MSN5YDR335W ISU1Q03020 165 aa1.78□□□□□ -2.13
MSN5YDR335W ADR1P07248 1323 aa1.78□□□□□ -2.13
MSN5YDR335W GAL2P13181 574 aa1.77□□□□□ -2.13
MSN5YDR335W SFP1P32432 683 aa1.77□□□□□ -2.13
MSN5YDR335W MPE1P35728 441 aaKnown RBP1.77□□□□□ -2.13
MSN5YDR335W CRP1P38845 465 aaKnown RBP1.77□□□□□ -2.13
MSN5YDR335W CEM1P39525 442 aa1.77□□□□□ -2.13
MSN5YDR335W MSH4P40965 878 aaPredicted RBP1.77□□□□□ -2.13
MSN5YDR335W YJR098CP47139 656 aa1.77□□□□□ -2.13
MSN5YDR335W YNR014WP53719 212 aa1.77□□□□□ -2.13
MSN5YDR335W MNL2Q12205 849 aa1.77□□□□□ -2.13
MSN5YDR335W XRN1P22147 1528 aaKnown RBP1.77□□□□□ -2.13
MSN5YDR335W RPS31P05759 152 aaKnown RBP1.77□□□□□ -2.13
MSN5YDR335W CYT1P07143 309 aa1.77□□□□□ -2.13
MSN5YDR335W TRX2P22803 104 aaKnown RBP1.77□□□□□ -2.13
MSN5YDR335W PBP2P38151 413 aaKnown RBP RIP-Chip data1.77□□□□□ -2.13not detected
MSN5YDR335W NAB3P38996 802 aaKnown RBP RIP-Chip data1.77□□□□□ -2.13not detected
MSN5YDR335W QDR1P40475 563 aa1.77□□□□□ -2.13
MSN5YDR335W MDJ2P42834 146 aa1.77□□□□□ -2.13
MSN5YDR335W IOC3P43596 787 aa1.77□□□□□ -2.13
MSN5YDR335W CWH41P53008 833 aa1.77□□□□□ -2.13
MSN5YDR335W TPD3P31383 635 aa1.77□□□□□ -2.13
MSN5YDR335W SLA1P32790 1244 aa1.77□□□□□ -2.13
MSN5YDR335W NUP82P40368 713 aa1.77□□□□□ -2.13
MSN5YDR335W YJR142WP47173 342 aa1.77□□□□□ -2.13
MSN5YDR335W KRE33P53914 1056 aaKnown RBP1.77□□□□□ -2.13
MSN5YDR335W LCB5Q06147 687 aaKnown RBP1.77□□□□□ -2.13
MSN5YDR335W THI72Q08579 599 aa1.77□□□□□ -2.13
MSN5YDR335W STB3Q12427 513 aa1.77□□□□□ -2.13
MSN5YDR335W TY1B-NL2Q99337 1749 aaKnown RBP1.76□□□□□ -2.13
MSN5YDR335W YPK9Q12697 1472 aa1.76□□□□□ -2.13
MSN5YDR335W MRT4P33201 236 aaKnown RBP1.76□□□□□ -2.13
MSN5YDR335W SSN3P39073 555 aa1.76□□□□□ -2.13
MSN5YDR335W YIR007WP40566 764 aa1.76□□□□□ -2.13
MSN5YDR335W DAK2P43550 591 aa1.76□□□□□ -2.13
MSN5YDR335W TY4A-JP47023 414 aa1.76□□□□□ -2.13
MSN5YDR335W MSB3P48566 633 aaPredicted RBP1.76□□□□□ -2.13
MSN5YDR335W FOL1P53848 824 aa1.76□□□□□ -2.13
MSN5YDR335W ADE12P80210 433 aaKnown RBP1.76□□□□□ -2.13
MSN5YDR335W MTC5Q03897 1148 aa1.76□□□□□ -2.13
MSN5YDR335W CAB1Q04430 367 aa1.76□□□□□ -2.13
MSN5YDR335W NUT2Q06213 157 aa1.76□□□□□ -2.13
MSN5YDR335W FRT1Q99332 602 aa1.76□□□□□ -2.13
MSN5YDR335W Q0182Q9ZZW1 134 aa1.76□□□□□ -2.13
MSN5YDR335W INH1P01097 85 aa1.76□□□□□ -2.13
MSN5YDR335W RPS6AP0CX37 236 aaKnown RBP1.76□□□□□ -2.13
MSN5YDR335W RPS6BP0CX38 236 aaPredicted RBP1.76□□□□□ -2.13
MSN5YDR335W CLN2P20438 545 aa1.76□□□□□ -2.13
MSN5YDR335W VAN1P23642 535 aa1.76□□□□□ -2.13
MSN5YDR335W MLF3P32047 452 aa1.76□□□□□ -2.13
MSN5YDR335W SEC6P32844 805 aa1.76□□□□□ -2.13
MSN5YDR335W SIS2P36024 562 aa1.76□□□□□ -2.13
MSN5YDR335W YAP1801P38856 637 aa1.76□□□□□ -2.13
MSN5YDR335W YJL181WP46987 611 aa1.76□□□□□ -2.13
MSN5YDR335W TDA5Q06417 326 aaKnown RBP1.76□□□□□ -2.13
MSN5YDR335W YDL176WQ12027 708 aa1.76□□□□□ -2.13
MSN5YDR335W NUP145P49687 1317 aa1.76□□□□□ -2.13
MSN5YDR335W SPT2P06843 333 aaPredicted RBP1.76□□□□□ -2.13
MSN5YDR335W SBP1P10080 294 aaKnown RBP1.76□□□□□ -2.13
MSN5YDR335W SPT5P27692 1063 aaKnown RBP1.76□□□□□ -2.13
MSN5YDR335W TIM23P32897 222 aa1.76□□□□□ -2.13
MSN5YDR335W RPT2P40327 437 aaKnown RBP1.76□□□□□ -2.13
MSN5YDR335W GDE1Q02979 1223 aa1.76□□□□□ -2.13
MSN5YDR335W YDL121CQ07541 149 aa1.76□□□□□ -2.13
MSN5YDR335W GPI13Q07830 1017 aa1.76□□□□□ -2.13
MSN5YDR335W PHO8P11491 566 aa1.75□□□□□ -2.13
MSN5YDR335W RAD4P14736 754 aa1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 59.1 ms