RNA–Protein interactions for RNA: YDL193W

NUS1, Transcript of Putative prenyltransferase, yeast

Gene NUS1, Length 1,128 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUS1	YDL193W	RSC4	Q02206	625 aa		5.7	□□□□□ -1.5
NUS1	YDL193W	YPQ2	Q06328	317 aa		5.7	□□□□□ -1.5
NUS1	YDL193W	NOC3	Q07896	663 aa	Predicted RBP	5.7	□□□□□ -1.5
NUS1	YDL193W	WRS1	Q12109	432 aa	Known RBP	5.7	□□□□□ -1.5
NUS1	YDL193W	PEP7	P32609	515 aa		5.69	□□□□□ -1.5
NUS1	YDL193W	LDH1	P38139	375 aa		5.69	□□□□□ -1.5
NUS1	YDL193W	FIR1	P40020	876 aa		5.69	□□□□□ -1.5
NUS1	YDL193W	YTA6	P40328	754 aa		5.69	□□□□□ -1.5
NUS1	YDL193W	HXT8	P40886	569 aa		5.69	□□□□□ -1.5
NUS1	YDL193W	SRP40	P32583	406 aa	Predicted RBP	5.68	□□□□□ -1.5
NUS1	YDL193W	PET112	P33893	541 aa		5.68	□□□□□ -1.5
NUS1	YDL193W	DYS1	P38791	387 aa		5.68	□□□□□ -1.5
NUS1	YDL193W	VAC8	P39968	578 aa		5.68	□□□□□ -1.5
NUS1	YDL193W	SBE2	P42223	864 aa	Known RBP	5.68	□□□□□ -1.5
NUS1	YDL193W	ALD6	P54115	500 aa	Known RBP	5.68	□□□□□ -1.5
NUS1	YDL193W	BSC2	Q05611	235 aa		5.68	□□□□□ -1.5
NUS1	YDL193W	ECM5	Q03214	1411 aa		5.67	□□□□□ -1.5
NUS1	YDL193W	RPS31	P05759	152 aa	Known RBP	5.67	□□□□□ -1.5
NUS1	YDL193W	MCM2	P29469	868 aa		5.67	□□□□□ -1.5
NUS1	YDL193W	FPR3	P38911	411 aa	Known RBP	5.67	□□□□□ -1.5
NUS1	YDL193W	RPS26A	P39938	119 aa	Known RBP	5.67	□□□□□ -1.5
NUS1	YDL193W	RPS26B	P39939	119 aa	Known RBP	5.67	□□□□□ -1.5
NUS1	YDL193W	YFL066C	P43538	392 aa		5.67	□□□□□ -1.5
NUS1	YDL193W	YNR014W	P53719	212 aa		5.67	□□□□□ -1.5
NUS1	YDL193W	ALD3	P54114	506 aa		5.67	□□□□□ -1.5
NUS1	YDL193W	SPR28	Q04921	423 aa		5.67	□□□□□ -1.5
NUS1	YDL193W	CYC8	P14922	966 aa		5.66	□□□□□ -1.5
NUS1	YDL193W	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
NUS1	YDL193W	KAR2	P16474	682 aa	Known RBP	5.66	□□□□□ -1.5
NUS1	YDL193W	VMA3	P25515	160 aa		5.66	□□□□□ -1.5
NUS1	YDL193W	RRP14	P36080	434 aa	Known RBP	5.66	□□□□□ -1.5
NUS1	YDL193W	YNL165W	P53891	406 aa		5.66	□□□□□ -1.5
NUS1	YDL193W	MCD1	Q12158	566 aa		5.66	□□□□□ -1.5
NUS1	YDL193W	YPR053C	Q6Q5F3	151 aa		5.66	□□□□□ -1.5
NUS1	YDL193W	REV3	P14284	1504 aa		5.65	□□□□□ -1.5
NUS1	YDL193W	RAD55	P38953	406 aa		5.65	□□□□□ -1.5
NUS1	YDL193W	NTA1	P40354	457 aa		5.65	□□□□□ -1.5
NUS1	YDL193W	TDA6	Q06466	467 aa		5.65	□□□□□ -1.5
NUS1	YDL193W	SSF2	Q12153	453 aa	Predicted RBP	5.65	□□□□□ -1.5
NUS1	YDL193W	Q0182	Q9ZZW1	134 aa		5.65	□□□□□ -1.5
NUS1	YDL193W	GPM1	P00950	247 aa	Known RBP	5.64	□□□□□ -1.51
NUS1	YDL193W	RAD2	P07276	1031 aa		5.64	□□□□□ -1.51
NUS1	YDL193W	MLF3	P32047	452 aa		5.64	□□□□□ -1.51
NUS1	YDL193W	IRS4	P36115	615 aa	Known RBP	5.64	□□□□□ -1.51
NUS1	YDL193W	MRPS18	P42847	217 aa		5.64	□□□□□ -1.51
NUS1	YDL193W	RNH70	P53331	553 aa		5.64	□□□□□ -1.51
NUS1	YDL193W	CWC24	P53769	259 aa		5.64	□□□□□ -1.51
NUS1	YDL193W	FAR11	P53917	953 aa		5.64	□□□□□ -1.51
NUS1	YDL193W	YOR131C	Q12486	218 aa		5.64	□□□□□ -1.51
NUS1	YDL193W	HXK1	P04806	485 aa	Known RBP	5.63	□□□□□ -1.51
NUS1	YDL193W	LEU1	P07264	779 aa	Known RBP	5.63	□□□□□ -1.51
NUS1	YDL193W	PPG1	P32838	368 aa		5.63	□□□□□ -1.51
NUS1	YDL193W	YKL091C	P33324	310 aa	Known RBP	5.63	□□□□□ -1.51
NUS1	YDL193W	KTR2	P33550	425 aa		5.63	□□□□□ -1.51
NUS1	YDL193W	NSE3	Q05541	303 aa		5.63	□□□□□ -1.51
NUS1	YDL193W	YCS4	Q06156	1176 aa		5.63	□□□□□ -1.51
NUS1	YDL193W	YMR187C	Q03236	431 aa		5.62	□□□□□ -1.51
NUS1	YDL193W	RPN4	Q03465	531 aa		5.62	□□□□□ -1.51
NUS1	YDL193W	RPP1A	P05318	106 aa	Predicted RBP	5.61	□□□□□ -1.51
NUS1	YDL193W	RGP1	P16664	663 aa		5.61	□□□□□ -1.51
NUS1	YDL193W	ISW1	P38144	1129 aa		5.61	□□□□□ -1.51
NUS1	YDL193W	BOI2	P39969	1040 aa		5.61	□□□□□ -1.51
NUS1	YDL193W	PSY2	P40164	858 aa		5.61	□□□□□ -1.51
NUS1	YDL193W	KRI1	P42846	591 aa	Known RBP	5.61	□□□□□ -1.51
NUS1	YDL193W	PRE9	P23638	258 aa	Known RBP	5.6	□□□□□ -1.51
NUS1	YDL193W	YHL008C	P38750	627 aa		5.6	□□□□□ -1.51
NUS1	YDL193W	MTO1	P53070	669 aa		5.6	□□□□□ -1.51
NUS1	YDL193W	TY1A-DR2	Q03964	440 aa	Known RBP	5.6	□□□□□ -1.51
NUS1	YDL193W	DAL4	Q04895	635 aa		5.6	□□□□□ -1.51
NUS1	YDL193W	URN1	Q06525	465 aa	Known RBP	5.6	□□□□□ -1.51
NUS1	YDL193W	INP54	Q08227	384 aa	Known RBP	5.6	□□□□□ -1.51
NUS1	YDL193W	PDC5	P16467	563 aa	Known RBP	5.59	□□□□□ -1.51
NUS1	YDL193W	MSN1	P22148	382 aa		5.59	□□□□□ -1.51
NUS1	YDL193W	KNS1	P32350	737 aa	Predicted RBP	5.59	□□□□□ -1.51
NUS1	YDL193W	KAP122	P32767	1081 aa		5.59	□□□□□ -1.51
NUS1	YDL193W	ECM2	P38241	364 aa	Known RBP	5.59	□□□□□ -1.51
NUS1	YDL193W	QDR2	P40474	542 aa		5.59	□□□□□ -1.51
NUS1	YDL193W	RGD2	P43556	714 aa		5.59	□□□□□ -1.51
NUS1	YDL193W	IOC3	P43596	787 aa		5.59	□□□□□ -1.51
NUS1	YDL193W	CCT8	P47079	568 aa	Known RBP	5.59	□□□□□ -1.51
NUS1	YDL193W	CDC53	Q12018	815 aa	Known RBP	5.59	□□□□□ -1.51
NUS1	YDL193W	FLP1	P03870	423 aa		5.58	□□□□□ -1.52
NUS1	YDL193W	PRP40	P33203	583 aa	Known RBP	5.58	□□□□□ -1.52
NUS1	YDL193W	GIP1	P38229	639 aa		5.58	□□□□□ -1.52
NUS1	YDL193W	TIF6	Q12522	245 aa	Known RBP	5.58	□□□□□ -1.52
NUS1	YDL193W	CDC34	P14682	295 aa		5.57	□□□□□ -1.52
NUS1	YDL193W	FAA3	P39002	694 aa		5.57	□□□□□ -1.52
NUS1	YDL193W	YGL081W	P53156	320 aa		5.57	□□□□□ -1.52
NUS1	YDL193W	ADI1	Q03677	179 aa		5.57	□□□□□ -1.52
NUS1	YDL193W	UTP14	Q04500	899 aa	Known RBP	5.57	□□□□□ -1.52
NUS1	YDL193W	YOR296W	Q08748	1289 aa		5.57	□□□□□ -1.52
NUS1	YDL193W	MDS3	P53094	1487 aa		5.57	□□□□□ -1.52
NUS1	YDL193W	BUD4	P47136	1447 aa		5.57	□□□□□ -1.52
NUS1	YDL193W	THO2	P53552	1597 aa	Known RBP	5.56	□□□□□ -1.52
NUS1	YDL193W	CIT2	P08679	460 aa		5.56	□□□□□ -1.52
NUS1	YDL193W	MCX1	P38323	520 aa	Predicted RBP	5.56	□□□□□ -1.52
NUS1	YDL193W	ALG12	P53730	551 aa		5.56	□□□□□ -1.52
NUS1	YDL193W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	5.56	□□□□□ -1.52	RIP-Chip
NUS1	YDL193W	GDE1	Q02979	1223 aa		5.56	□□□□□ -1.52
NUS1	YDL193W	YPL109C	Q02981	657 aa		5.56	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms