RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C YBR287WP38355 427 aa5.14□□□□□ -1.59
RRP42YDL111C PPT1P53043 513 aa5.14□□□□□ -1.59
RRP42YDL111C SNU71P53207 620 aaKnown RBP5.14□□□□□ -1.59
RRP42YDL111C NOP7P53261 605 aaKnown RBP5.14□□□□□ -1.59
RRP42YDL111C PNP1Q05788 311 aa5.14□□□□□ -1.59
RRP42YDL111C EMG1Q06287 252 aaKnown RBP5.14□□□□□ -1.59
RRP42YDL111C HXT8P40886 569 aa5.13□□□□□ -1.59
RRP42YDL111C SEN54Q02825 467 aaPredicted RBP5.13□□□□□ -1.59
RRP42YDL111C APC11Q12157 165 aa5.13□□□□□ -1.59
RRP42YDL111C HAT1Q12341 374 aa5.13□□□□□ -1.59
RRP42YDL111C KTR2P33550 425 aa5.12□□□□□ -1.59
RRP42YDL111C BOI1P38041 980 aaKnown RBP5.12□□□□□ -1.59
RRP42YDL111C FIR1P40020 876 aa5.12□□□□□ -1.59
RRP42YDL111C INP51P40559 946 aaKnown RBP5.12□□□□□ -1.59
RRP42YDL111C YJL181WP46987 611 aa5.12□□□□□ -1.59
RRP42YDL111C RRN6P32786 894 aa5.11□□□□□ -1.59
RRP42YDL111C STM1P39015 273 aaKnown RBP5.11□□□□□ -1.59
RRP42YDL111C RGD2P43556 714 aa5.11□□□□□ -1.59
RRP42YDL111C GUP1P53154 560 aa5.11□□□□□ -1.59
RRP42YDL111C BIO5P53744 561 aaKnown RBP5.11□□□□□ -1.59
RRP42YDL111C LSO1Q3E827 93 aa5.11□□□□□ -1.59
RRP42YDL111C CHS2P14180 963 aa5.1□□□□□ -1.59
RRP42YDL111C AIM46P38885 310 aa5.1□□□□□ -1.59
RRP42YDL111C LEM3P42838 414 aa5.1□□□□□ -1.59
RRP42YDL111C YGR130CP53278 816 aa5.1□□□□□ -1.59
RRP42YDL111C SOG2Q08817 791 aa5.1□□□□□ -1.59
RRP42YDL111C REC8Q12188 680 aa5.1□□□□□ -1.59
RRP42YDL111C SEC20P28791 383 aa5.09□□□□□ -1.59
RRP42YDL111C ASF1P32447 279 aa5.09□□□□□ -1.59
RRP42YDL111C PUB1P32588 453 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
RRP42YDL111C NTA1P40354 457 aa5.09□□□□□ -1.59
RRP42YDL111C ALD3P54114 506 aa5.09□□□□□ -1.59
RRP42YDL111C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
RRP42YDL111C TFA2P36145 328 aa5.08□□□□□ -1.6
RRP42YDL111C PAN5P38787 379 aa5.08□□□□□ -1.6
RRP42YDL111C CTH1P47976 325 aa5.08□□□□□ -1.6
RRP42YDL111C SUT1P53032 299 aaKnown RBP5.08□□□□□ -1.6
RRP42YDL111C NAM7P30771 971 aaKnown RBP5.07□□□□□ -1.6
RRP42YDL111C AKR1P39010 764 aa5.07□□□□□ -1.6
RRP42YDL111C FUS1P11710 512 aa5.06□□□□□ -1.6
RRP42YDL111C RPB10P22139 70 aa5.06□□□□□ -1.6
RRP42YDL111C SPO74P45819 413 aa5.06□□□□□ -1.6
RRP42YDL111C ORC1P54784 914 aaPredicted RBP5.06□□□□□ -1.6
RRP42YDL111C BRE4Q07660 1125 aa5.06□□□□□ -1.6
RRP42YDL111C YBL113CQ7M4S9 792 aa5.06□□□□□ -1.6
RRP42YDL111C SMC1P32908 1225 aa5.05□□□□□ -1.6
RRP42YDL111C IRS4P36115 615 aaKnown RBP5.05□□□□□ -1.6
RRP42YDL111C PAM1P37304 830 aaKnown RBP5.05□□□□□ -1.6
RRP42YDL111C RAD55P38953 406 aa5.05□□□□□ -1.6
RRP42YDL111C BOL3P39724 118 aa5.05□□□□□ -1.6
RRP42YDL111C POL5P39985 1022 aaKnown RBP5.05□□□□□ -1.6
RRP42YDL111C AOS1Q06624 347 aa5.05□□□□□ -1.6
RRP42YDL111C TIF6Q12522 245 aaKnown RBP5.05□□□□□ -1.6
RRP42YDL111C CYC7P00045 113 aa5.04□□□□□ -1.6
RRP42YDL111C FUR4P05316 633 aaKnown RBP5.04□□□□□ -1.6
RRP42YDL111C MAE1P36013 669 aaKnown RBP5.04□□□□□ -1.6
RRP42YDL111C PSY2P40164 858 aa5.04□□□□□ -1.6
RRP42YDL111C MAG2Q06436 670 aaKnown RBP5.04□□□□□ -1.6
RRP42YDL111C HVG1P0CE11 249 aa5.03□□□□□ -1.6
RRP42YDL111C ELM1P32801 640 aa5.03□□□□□ -1.6
RRP42YDL111C ERP5P38819 212 aa5.03□□□□□ -1.6
RRP42YDL111C YJR124CP47159 448 aa5.03□□□□□ -1.6
RRP42YDL111C NCE103P53615 221 aa5.03□□□□□ -1.6
RRP42YDL111C SPO71Q03868 1245 aa5.03□□□□□ -1.6
RRP42YDL111C KAR5Q04746 504 aa5.03□□□□□ -1.6
RRP42YDL111C MSC6Q08818 692 aaKnown RBP5.03□□□□□ -1.6
RRP42YDL111C MSB1P21339 1137 aaKnown RBP5.02□□□□□ -1.61
RRP42YDL111C IPL1P38991 367 aa5.02□□□□□ -1.61
RRP42YDL111C MET10P39692 1035 aa5.02□□□□□ -1.61
RRP42YDL111C YNR065CP53751 1116 aa5.02□□□□□ -1.61
RRP42YDL111C GLO4Q12320 285 aa5.02□□□□□ -1.61
RRP42YDL111C TRL1P09880 827 aaKnown RBP5.01□□□□□ -1.61
RRP42YDL111C PYC2P32327 1180 aaKnown RBP5.01□□□□□ -1.61
RRP42YDL111C ELG1Q12050 791 aa5.01□□□□□ -1.61
RRP42YDL111C PPX1P38698 397 aa5□□□□□ -1.61
RRP42YDL111C NEO1P40527 1151 aa5□□□□□ -1.61
RRP42YDL111C ATG1P53104 897 aa5□□□□□ -1.61
RRP42YDL111C HAS1Q03532 505 aaKnown RBP5□□□□□ -1.61
RRP42YDL111C YHL050CP38721 697 aa4.99□□□□□ -1.61
RRP42YDL111C YHR219WP38900 624 aa4.99□□□□□ -1.61
RRP42YDL111C RNQ1P25367 405 aa4.98□□□□□ -1.61
RRP42YDL111C MDJ2P42834 146 aa4.98□□□□□ -1.61
RRP42YDL111C ERS1P17261 260 aa4.97□□□□□ -1.61
RRP42YDL111C GRS1P38088 690 aaKnown RBP4.97□□□□□ -1.61
RRP42YDL111C ACF4P47129 309 aa4.97□□□□□ -1.61
RRP42YDL111C CTR9P89105 1077 aa4.97□□□□□ -1.61
RRP42YDL111C RSC4Q02206 625 aa4.97□□□□□ -1.61
RRP42YDL111C SVF1Q05515 481 aa4.97□□□□□ -1.61
RRP42YDL111C RRP15Q06511 250 aaPredicted RBP4.97□□□□□ -1.61
RRP42YDL111C GIC2Q06648 383 aa4.97□□□□□ -1.61
RRP42YDL111C FET4P40988 552 aa4.96□□□□□ -1.62
RRP42YDL111C KIP3P53086 805 aaKnown RBP4.96□□□□□ -1.62
RRP42YDL111C FAR11P53917 953 aa4.96□□□□□ -1.62
RRP42YDL111C UBP5P39944 805 aa4.95□□□□□ -1.62
RRP42YDL111C POL32P47110 350 aa4.95□□□□□ -1.62
RRP42YDL111C GLO3P38682 493 aaKnown RBP4.94□□□□□ -1.62
RRP42YDL111C QDR1P40475 563 aa4.94□□□□□ -1.62
RRP42YDL111C UFD2P54860 961 aa4.94□□□□□ -1.62
RRP42YDL111C COBP00163 385 aa4.93□□□□□ -1.62
RRP42YDL111C SEA4P38164 1038 aa4.93□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms