RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C YHL017WP38745 532 aa2.44□□□□□ -2.02
BRE1YDL074C YGR122WP53272 402 aa2.44□□□□□ -2.02
BRE1YDL074C UBX2Q04228 584 aa2.44□□□□□ -2.02
BRE1YDL074C LCD1Q04377 747 aa2.44□□□□□ -2.02
BRE1YDL074C ESC2Q06340 456 aa2.44□□□□□ -2.02
BRE1YDL074C YPR204WQ08995 1032 aa2.44□□□□□ -2.02
BRE1YDL074C RRI2Q12348 645 aa2.44□□□□□ -2.02
BRE1YDL074C AAP1P37898 856 aaKnown RBP2.44□□□□□ -2.02
BRE1YDL074C HXT13P39924 564 aa2.44□□□□□ -2.02
BRE1YDL074C SLN1P39928 1220 aaPredicted RBP2.44□□□□□ -2.02
BRE1YDL074C DOT5P40553 215 aa2.44□□□□□ -2.02
BRE1YDL074C DJP1P40564 432 aa2.44□□□□□ -2.02
BRE1YDL074C YKE2P52553 114 aa2.44□□□□□ -2.02
BRE1YDL074C APP1P53933 587 aa2.44□□□□□ -2.02
BRE1YDL074C ARP5P53946 755 aa2.44□□□□□ -2.02
BRE1YDL074C FOX2Q02207 900 aaKnown RBP2.44□□□□□ -2.02
BRE1YDL074C ASF1P32447 279 aa2.43□□□□□ -2.02
BRE1YDL074C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.43□□□□□ -2.02not detected
BRE1YDL074C APL2P36000 726 aaPredicted RBP2.43□□□□□ -2.02
BRE1YDL074C MET1P36150 593 aa2.43□□□□□ -2.02
BRE1YDL074C YKR075CP36155 307 aa2.43□□□□□ -2.02
BRE1YDL074C RRP8P38961 392 aaKnown RBP2.43□□□□□ -2.02
BRE1YDL074C ALD3P54114 506 aa2.43□□□□□ -2.02
BRE1YDL074C VPS20Q04272 221 aa2.43□□□□□ -2.02
BRE1YDL074C ADR1P07248 1323 aa2.42□□□□□ -2.02
BRE1YDL074C POM152P39685 1337 aa2.42□□□□□ -2.02
BRE1YDL074C CYB2P00175 591 aa2.42□□□□□ -2.02
BRE1YDL074C ARG8P18544 423 aa2.42□□□□□ -2.02
BRE1YDL074C SEC18P18759 758 aaKnown RBP2.42□□□□□ -2.02
BRE1YDL074C RPN12P32496 274 aa2.42□□□□□ -2.02
BRE1YDL074C ELM1P32801 640 aa2.42□□□□□ -2.02
BRE1YDL074C MIC60P36112 540 aa2.42□□□□□ -2.02
BRE1YDL074C PES4P39684 611 aa2.42□□□□□ -2.02
BRE1YDL074C CCT5P40413 562 aaKnown RBP2.42□□□□□ -2.02
BRE1YDL074C BUD6P41697 788 aa2.42□□□□□ -2.02
BRE1YDL074C TFG2P41896 400 aaPredicted RBP2.42□□□□□ -2.02
BRE1YDL074C IOC3P43596 787 aa2.42□□□□□ -2.02
BRE1YDL074C ALG2P43636 503 aa2.42□□□□□ -2.02
BRE1YDL074C YGL082WP53155 381 aa2.42□□□□□ -2.02
BRE1YDL074C MRPS35P53292 345 aa2.42□□□□□ -2.02
BRE1YDL074C HXT17P53631 564 aa2.42□□□□□ -2.02
BRE1YDL074C ALO1P54783 526 aaKnown RBP2.42□□□□□ -2.02
BRE1YDL074C RMD1Q03441 430 aa2.42□□□□□ -2.02
BRE1YDL074C YMR074CQ04773 145 aa2.42□□□□□ -2.02
BRE1YDL074C HRQ1Q05549 1077 aa2.42□□□□□ -2.02
BRE1YDL074C ESF1Q06344 628 aaKnown RBP2.42□□□□□ -2.02
BRE1YDL074C PEX19Q07418 342 aa2.42□□□□□ -2.02
BRE1YDL074C TUM1Q08686 304 aaKnown RBP2.42□□□□□ -2.02
BRE1YDL074C ELG1Q12050 791 aa2.42□□□□□ -2.02
BRE1YDL074C TAH18Q12181 623 aa2.42□□□□□ -2.02
BRE1YDL074C NYV1Q12255 253 aa2.42□□□□□ -2.02
BRE1YDL074C FAS2P19097 1887 aaKnown RBP2.42□□□□□ -2.02
BRE1YDL074C RPL22AP05749 121 aaKnown RBP2.42□□□□□ -2.02
BRE1YDL074C ERG12P07277 443 aa2.42□□□□□ -2.02
BRE1YDL074C CDC4P07834 779 aa2.42□□□□□ -2.02
BRE1YDL074C TRL1P09880 827 aaKnown RBP2.42□□□□□ -2.02
BRE1YDL074C SSA2P10592 639 aaKnown RBP2.42□□□□□ -2.02
BRE1YDL074C PGI1P12709 554 aaKnown RBP2.42□□□□□ -2.02
BRE1YDL074C PEP3P27801 918 aa2.42□□□□□ -2.02
BRE1YDL074C SPC110P32380 944 aa2.42□□□□□ -2.02
BRE1YDL074C PRX1P34227 261 aaKnown RBP2.42□□□□□ -2.02
BRE1YDL074C CAB3P36076 571 aa2.42□□□□□ -2.02
BRE1YDL074C CRG1P38892 291 aaRIP-Chip data2.42□□□□□ -2.02not detected
BRE1YDL074C AIM9P40053 627 aaKnown RBP2.42□□□□□ -2.02
BRE1YDL074C IRC8P47046 822 aa2.42□□□□□ -2.02
BRE1YDL074C NPA3P47122 385 aa2.42□□□□□ -2.02
BRE1YDL074C SYF1Q04048 859 aaPredicted RBP2.42□□□□□ -2.02
BRE1YDL074C LCB5Q06147 687 aaKnown RBP2.42□□□□□ -2.02
BRE1YDL074C SPN1Q06505 410 aaPredicted RBP2.42□□□□□ -2.02
BRE1YDL074C DPH6Q12429 685 aa2.42□□□□□ -2.02
BRE1YDL074C RPS9BP05755 195 aaKnown RBP2.41□□□□□ -2.02
BRE1YDL074C MATALPHA2P0CY08 210 aa2.41□□□□□ -2.02
BRE1YDL074C HMLALPHA2P0CY09 210 aa2.41□□□□□ -2.02
BRE1YDL074C COQ8P27697 501 aa2.41□□□□□ -2.02
BRE1YDL074C SEC20P28791 383 aa2.41□□□□□ -2.02
BRE1YDL074C RVS167P39743 482 aaKnown RBP2.41□□□□□ -2.02
BRE1YDL074C CIR1P42940 261 aa2.41□□□□□ -2.02
BRE1YDL074C RPN11P43588 306 aaKnown RBP2.41□□□□□ -2.02
BRE1YDL074C ALD2P47771 506 aa2.41□□□□□ -2.02
BRE1YDL074C RSC1P53236 928 aa2.41□□□□□ -2.02
BRE1YDL074C IRC3Q06683 689 aa2.41□□□□□ -2.02
BRE1YDL074C CDC73Q06697 393 aa2.41□□□□□ -2.02
BRE1YDL074C YPL150WQ12152 901 aa2.41□□□□□ -2.02
BRE1YDL074C CLF1Q12309 687 aaPredicted RBP2.41□□□□□ -2.02
BRE1YDL074C PFK2P16862 959 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
BRE1YDL074C CBP3P21560 335 aa2.41□□□□□ -2.02
BRE1YDL074C YKT6P36015 200 aaKnown RBP2.41□□□□□ -2.02
BRE1YDL074C CTF18P49956 741 aa2.41□□□□□ -2.02
BRE1YDL074C HPC2Q01448 625 aa2.41□□□□□ -2.02
BRE1YDL074C EST2Q06163 884 aa2.41□□□□□ -2.02
BRE1YDL074C BDF2Q07442 638 aa2.41□□□□□ -2.02
BRE1YDL074C DDP1Q99321 188 aaKnown RBP2.41□□□□□ -2.02
BRE1YDL074C IMP2'P32351 346 aa2.4□□□□□ -2.03
BRE1YDL074C FBP26P32604 452 aa2.4□□□□□ -2.03
BRE1YDL074C NGR1P32831 672 aaKnown RBP2.4□□□□□ -2.03
BRE1YDL074C BMH2P34730 273 aaKnown RBP2.4□□□□□ -2.03
BRE1YDL074C MRPL10P36520 322 aa2.4□□□□□ -2.03
BRE1YDL074C RFT1P38206 574 aaPredicted RBP2.4□□□□□ -2.03
BRE1YDL074C RKM3P38222 552 aa2.4□□□□□ -2.03
BRE1YDL074C RRM3P38766 723 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 54 ms