RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W YRB30P53107 440 aaPredicted RBP6.15□□□□□ -1.42
CDC28YBR160W YNL165WP53891 406 aa6.15□□□□□ -1.42
CDC28YBR160W YRF1-1P0CX20 1796 aa6.14□□□□□ -1.43
CDC28YBR160W YRF1-5P0CX21 1796 aa6.14□□□□□ -1.43
CDC28YBR160W YRF1-8P0CX22 1796 aa6.14□□□□□ -1.43
CDC28YBR160W IRE1P32361 1115 aa6.14□□□□□ -1.43
CDC28YBR160W ALA1P40825 983 aaKnown RBP6.14□□□□□ -1.43
CDC28YBR160W ORC1P54784 914 aaPredicted RBP6.14□□□□□ -1.43
CDC28YBR160W PSH1Q12161 406 aa6.14□□□□□ -1.43
CDC28YBR160W PDR11P40550 1411 aa6.14□□□□□ -1.43
CDC28YBR160W DOP1Q03921 1698 aa6.14□□□□□ -1.43
CDC28YBR160W VAN1P23642 535 aa6.13□□□□□ -1.43
CDC28YBR160W ESL2P36168 1195 aa6.13□□□□□ -1.43
CDC28YBR160W HXT5P38695 592 aa6.13□□□□□ -1.43
CDC28YBR160W YIR014WP40570 242 aa6.13□□□□□ -1.43
CDC28YBR160W DRS2P39524 1355 aa6.13□□□□□ -1.43
CDC28YBR160W BNR1P40450 1375 aa6.13□□□□□ -1.43
CDC28YBR160W VMR1P38735 1592 aa6.13□□□□□ -1.43
CDC28YBR160W DNF2Q12675 1612 aa6.13□□□□□ -1.43
CDC28YBR160W SEC7P11075 2009 aaKnown RBP6.13□□□□□ -1.43
CDC28YBR160W PDC6P26263 563 aaKnown RBP6.12□□□□□ -1.43
CDC28YBR160W NUP192P47054 1683 aa6.11□□□□□ -1.43
CDC28YBR160W LEU1P07264 779 aaKnown RBP6.11□□□□□ -1.43
CDC28YBR160W ALD2P47771 506 aa6.11□□□□□ -1.43
CDC28YBR160W KIP3P53086 805 aaKnown RBP6.11□□□□□ -1.43
CDC28YBR160W TRS33Q99394 268 aa6.11□□□□□ -1.43
CDC28YBR160W MLF3P32047 452 aa6.1□□□□□ -1.43
CDC28YBR160W TAF5P38129 798 aa6.1□□□□□ -1.43
CDC28YBR160W FPR3P38911 411 aaKnown RBP6.1□□□□□ -1.43
CDC28YBR160W CUZ1P53899 274 aa6.1□□□□□ -1.43
CDC28YBR160W EAF7P53911 425 aaKnown RBP6.1□□□□□ -1.43
CDC28YBR160W CWC15Q03772 175 aaKnown RBP6.1□□□□□ -1.43
CDC28YBR160W PUF6Q04373 656 aaKnown RBP6.1□□□□□ -1.43
CDC28YBR160W CAB1Q04430 367 aa6.1□□□□□ -1.43
CDC28YBR160W UTP4Q06679 776 aaKnown RBP6.1□□□□□ -1.43
CDC28YBR160W RVB2Q12464 471 aaKnown RBP6.1□□□□□ -1.43
CDC28YBR160W IML1P47170 1584 aa6.1□□□□□ -1.43
CDC28YBR160W SCD5P34758 872 aa6.09□□□□□ -1.43
CDC28YBR160W NUP188P52593 1655 aaKnown RBP6.09□□□□□ -1.43
CDC28YBR160W MET5P47169 1442 aa6.08□□□□□ -1.44
CDC28YBR160W SLD2P34252 453 aa6.08□□□□□ -1.44
CDC28YBR160W TPS3P38426 1054 aaKnown RBP6.08□□□□□ -1.44
CDC28YBR160W DIT1P21623 536 aa6.07□□□□□ -1.44
CDC28YBR160W SNF7P39929 240 aaKnown RBP6.07□□□□□ -1.44
CDC28YBR160W ALD4P46367 519 aaKnown RBP6.07□□□□□ -1.44
CDC28YBR160W HPF1Q05164 967 aa6.07□□□□□ -1.44
CDC28YBR160W NOP8Q08287 484 aaPredicted RBP6.07□□□□□ -1.44
CDC28YBR160W Q0182Q9ZZW1 134 aa6.07□□□□□ -1.44
CDC28YBR160W CDC3P32457 520 aaKnown RBP6.06□□□□□ -1.44
CDC28YBR160W FUN12P39730 1002 aaKnown RBP6.06□□□□□ -1.44
CDC28YBR160W YFR016CP43597 1233 aaKnown RBP6.06□□□□□ -1.44
CDC28YBR160W CWH41P53008 833 aa6.06□□□□□ -1.44
CDC28YBR160W SNF2P22082 1703 aa6.05□□□□□ -1.44
CDC28YBR160W MLP1Q02455 1875 aaKnown RBP6.05□□□□□ -1.44
CDC28YBR160W SRS2P12954 1174 aa6.05□□□□□ -1.44
CDC28YBR160W SPE2P21182 396 aa6.05□□□□□ -1.44
CDC28YBR160W JJJ3P47138 172 aa6.05□□□□□ -1.44
CDC28YBR160W YGR035CP53222 116 aa6.05□□□□□ -1.44
CDC28YBR160W YDL144CQ07589 356 aa6.05□□□□□ -1.44
CDC28YBR160W YDR461C-AQ2V2P7 80 aa6.05□□□□□ -1.44
CDC28YBR160W YBR197CP38306 217 aa6.04□□□□□ -1.44
CDC28YBR160W YTA6P40328 754 aa6.04□□□□□ -1.44
CDC28YBR160W LYS5P50113 272 aa6.04□□□□□ -1.44
CDC28YBR160W YMR265CQ03508 461 aaKnown RBP6.04□□□□□ -1.44
CDC28YBR160W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
CDC28YBR160W SYT1Q06836 1226 aa6.04□□□□□ -1.44
CDC28YBR160W HAP1P0CE41 1502 aa6.04□□□□□ -1.44
CDC28YBR160W TRM3Q07527 1436 aa6.03□□□□□ -1.44
CDC28YBR160W RGP1P16664 663 aa6.03□□□□□ -1.44
CDC28YBR160W MRPL16P38064 232 aa6.03□□□□□ -1.44
CDC28YBR160W TCB2P48231 1178 aa6.03□□□□□ -1.44
CDC28YBR160W PUN1Q06991 263 aa6.03□□□□□ -1.44
CDC28YBR160W MRPL33P20084 86 aa6.02□□□□□ -1.45
CDC28YBR160W SUI2P20459 304 aaKnown RBP6.02□□□□□ -1.45
CDC28YBR160W CEM1P39525 442 aa6.02□□□□□ -1.45
CDC28YBR160W SPR3P41901 512 aa6.02□□□□□ -1.45
CDC28YBR160W FOX2Q02207 900 aaKnown RBP6.02□□□□□ -1.45
CDC28YBR160W PNP1Q05788 311 aa6.02□□□□□ -1.45
CDC28YBR160W STB3Q12427 513 aa6.02□□□□□ -1.45
CDC28YBR160W DPH6Q12429 685 aa6.02□□□□□ -1.45
CDC28YBR160W ROX1P25042 368 aa6.01□□□□□ -1.45
CDC28YBR160W SKP1P52286 194 aa6.01□□□□□ -1.45
CDC28YBR160W KRE33P53914 1056 aaKnown RBP6.01□□□□□ -1.45
CDC28YBR160W YEF3P16521 1044 aaKnown RBP6□□□□□ -1.45
CDC28YBR160W ISC10P32645 267 aa6□□□□□ -1.45
CDC28YBR160W YRF1-4O13559 1382 aa6□□□□□ -1.45
CDC28YBR160W YML133CQ03099 1374 aa6□□□□□ -1.45
CDC28YBR160W YLL067CQ07888 1374 aa6□□□□□ -1.45
CDC28YBR160W YLL066CQ99208 1374 aa6□□□□□ -1.45
CDC28YBR160W BCK1Q01389 1478 aa6□□□□□ -1.45
CDC28YBR160W VMA3P25515 160 aa5.99□□□□□ -1.45
CDC28YBR160W KAP122P32767 1081 aa5.99□□□□□ -1.45
CDC28YBR160W KTR2P33550 425 aa5.99□□□□□ -1.45
CDC28YBR160W BOI1P38041 980 aaKnown RBP5.99□□□□□ -1.45
CDC28YBR160W MSC7P38694 644 aa5.99□□□□□ -1.45
CDC28YBR160W QDR2P40474 542 aa5.99□□□□□ -1.45
CDC28YBR160W MTO1P53070 669 aa5.99□□□□□ -1.45
CDC28YBR160W TRK2P28584 889 aa5.98□□□□□ -1.45
CDC28YBR160W MNN4P36044 1178 aa5.98□□□□□ -1.45
CDC28YBR160W YAP3P38749 330 aa5.98□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms