RNA–Protein interactions for RNA: YAL011W

SWC3, Transcript of Protein of unknown function, yeastyeast

Gene SWC3, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC3YAL011W YDR306CQ06640 478 aa5.34□□□□□ -1.55
SWC3YAL011W TYW1Q08960 810 aaKnown RBP5.34□□□□□ -1.55
SWC3YAL011W MNL2Q12205 849 aa5.34□□□□□ -1.55
SWC3YAL011W RAD59Q12223 238 aa5.34□□□□□ -1.55
SWC3YAL011W TAF13P11747 167 aa5.33□□□□□ -1.56
SWC3YAL011W OSM1P21375 501 aaKnown RBP5.33□□□□□ -1.56
SWC3YAL011W ATG1P53104 897 aa5.33□□□□□ -1.56
SWC3YAL011W VPS16Q03308 798 aa5.33□□□□□ -1.56
SWC3YAL011W DUR1,2P32528 1835 aaKnown RBP5.33□□□□□ -1.56
SWC3YAL011W BLI1P35727 113 aa5.32□□□□□ -1.56
SWC3YAL011W NUP133P36161 1157 aa5.32□□□□□ -1.56
SWC3YAL011W GRS1P38088 690 aaKnown RBP5.32□□□□□ -1.56
SWC3YAL011W RIM15P43565 1770 aa5.32□□□□□ -1.56
SWC3YAL011W MRC1P25588 1096 aa5.32□□□□□ -1.56
SWC3YAL011W RPN12P32496 274 aa5.32□□□□□ -1.56
SWC3YAL011W GCD7P32502 381 aaPredicted RBP5.32□□□□□ -1.56
SWC3YAL011W DLD1P32891 587 aa5.32□□□□□ -1.56
SWC3YAL011W YKL133CP36066 463 aa5.32□□□□□ -1.56
SWC3YAL011W SNF7P39929 240 aaKnown RBP5.32□□□□□ -1.56
SWC3YAL011W BDP1P46678 594 aa5.32□□□□□ -1.56
SWC3YAL011W MEC3Q02574 474 aa5.32□□□□□ -1.56
SWC3YAL011W FRK1Q03002 865 aaPredicted RBP5.32□□□□□ -1.56
SWC3YAL011W CWC15Q03772 175 aaKnown RBP5.32□□□□□ -1.56
SWC3YAL011W BDF2Q07442 638 aa5.32□□□□□ -1.56
SWC3YAL011W ENV9Q08651 330 aa5.32□□□□□ -1.56
SWC3YAL011W PSH1Q12161 406 aa5.32□□□□□ -1.56
SWC3YAL011W ERP4Q12450 207 aa5.32□□□□□ -1.56
SWC3YAL011W TRX2P22803 104 aaKnown RBP5.31□□□□□ -1.56
SWC3YAL011W TPS3P38426 1054 aaKnown RBP5.31□□□□□ -1.56
SWC3YAL011W MSH4P40965 878 aaPredicted RBP5.31□□□□□ -1.56
SWC3YAL011W APP1P53933 587 aa5.31□□□□□ -1.56
SWC3YAL011W GCR2Q01722 534 aa5.31□□□□□ -1.56
SWC3YAL011W VPS64Q03944 604 aa5.31□□□□□ -1.56
SWC3YAL011W ENT2Q05785 613 aa5.31□□□□□ -1.56
SWC3YAL011W ATG13Q06628 738 aa5.31□□□□□ -1.56
SWC3YAL011W ROX1P25042 368 aa5.3□□□□□ -1.56
SWC3YAL011W GLO3P38682 493 aaKnown RBP5.3□□□□□ -1.56
SWC3YAL011W YBP2P53169 641 aa5.3□□□□□ -1.56
SWC3YAL011W HST2P53686 357 aa5.3□□□□□ -1.56
SWC3YAL011W VMS1Q04311 632 aaKnown RBP5.3□□□□□ -1.56
SWC3YAL011W CDC53Q12018 815 aaKnown RBP5.3□□□□□ -1.56
SWC3YAL011W SWI1P09547 1314 aa5.3□□□□□ -1.56
SWC3YAL011W MET6P05694 767 aaKnown RBP5.3□□□□□ -1.56
SWC3YAL011W CDC16P09798 840 aa5.3□□□□□ -1.56
SWC3YAL011W CLN2P20438 545 aa5.3□□□□□ -1.56
SWC3YAL011W HXT13P39924 564 aa5.3□□□□□ -1.56
SWC3YAL011W FYV10P40492 516 aa5.3□□□□□ -1.56
SWC3YAL011W EPS1P40557 701 aa5.3□□□□□ -1.56
SWC3YAL011W EMP47P43555 445 aa5.3□□□□□ -1.56
SWC3YAL011W HXT17P53631 564 aa5.3□□□□□ -1.56
SWC3YAL011W RMT2Q03305 412 aa5.3□□□□□ -1.56
SWC3YAL011W RMD1Q03441 430 aa5.3□□□□□ -1.56
SWC3YAL011W YOR131CQ12486 218 aa5.3□□□□□ -1.56
SWC3YAL011W VAS1P07806 1104 aaKnown RBP5.29□□□□□ -1.56
SWC3YAL011W YDJ1P25491 409 aaKnown RBP5.29□□□□□ -1.56
SWC3YAL011W MET4P32389 672 aa5.29□□□□□ -1.56
SWC3YAL011W YEN1P40028 759 aa5.29□□□□□ -1.56
SWC3YAL011W VHR2P40041 505 aa5.29□□□□□ -1.56
SWC3YAL011W ECM23Q02710 187 aa5.29□□□□□ -1.56
SWC3YAL011W WRS1Q12109 432 aaKnown RBP5.29□□□□□ -1.56
SWC3YAL011W NHA1Q99271 985 aa5.29□□□□□ -1.56
SWC3YAL011W ROM2P51862 1356 aaKnown RBP5.28□□□□□ -1.56
SWC3YAL011W LPD1P09624 499 aaKnown RBP5.28□□□□□ -1.56
SWC3YAL011W SRS2P12954 1174 aa5.28□□□□□ -1.56
SWC3YAL011W CLB5P30283 435 aa5.28□□□□□ -1.56
SWC3YAL011W APL2P36000 726 aaPredicted RBP5.28□□□□□ -1.56
SWC3YAL011W MAD1P40957 749 aa5.28□□□□□ -1.56
SWC3YAL011W MEH1Q02205 184 aa5.28□□□□□ -1.56
SWC3YAL011W YLR326WQ06170 240 aaKnown RBP5.28□□□□□ -1.56
SWC3YAL011W NUT2Q06213 157 aa5.28□□□□□ -1.56
SWC3YAL011W TUM1Q08686 304 aaKnown RBP5.28□□□□□ -1.56
SWC3YAL011W UTP10P42945 1769 aaKnown RBP5.28□□□□□ -1.56
SWC3YAL011W SIS1P25294 352 aaKnown RBP5.28□□□□□ -1.56
SWC3YAL011W SLX5P32828 619 aaKnown RBP5.28□□□□□ -1.56
SWC3YAL011W PKH3Q03306 898 aaPredicted RBP5.28□□□□□ -1.56
SWC3YAL011W ESF1Q06344 628 aaKnown RBP5.28□□□□□ -1.56
SWC3YAL011W LSP1Q12230 341 aaKnown RBP5.28□□□□□ -1.56
SWC3YAL011W GAL2P13181 574 aa5.27□□□□□ -1.57
SWC3YAL011W MSP1P28737 362 aa5.27□□□□□ -1.57
SWC3YAL011W PTC3P34221 468 aaKnown RBP5.27□□□□□ -1.57
SWC3YAL011W FAF1P40546 346 aaPredicted RBP5.27□□□□□ -1.57
SWC3YAL011W ACF4P47129 309 aa5.27□□□□□ -1.57
SWC3YAL011W PSK2Q08217 1101 aa5.27□□□□□ -1.57
SWC3YAL011W PPM2Q08282 695 aa5.27□□□□□ -1.57
SWC3YAL011W OPI1P21957 404 aa5.26□□□□□ -1.57
SWC3YAL011W UBX7P38349 436 aa5.26□□□□□ -1.57
SWC3YAL011W KIC1P38692 1080 aa5.26□□□□□ -1.57
SWC3YAL011W ORC6P38826 435 aa5.26□□□□□ -1.57
SWC3YAL011W PEX8P53248 589 aa5.26□□□□□ -1.57
SWC3YAL011W IMH1Q06704 911 aaKnown RBP5.26□□□□□ -1.57
SWC3YAL011W SNU66Q12420 587 aaPredicted RBP5.26□□□□□ -1.57
SWC3YAL011W NCB2Q92317 146 aa5.26□□□□□ -1.57
SWC3YAL011W FRT1Q99332 602 aa5.26□□□□□ -1.57
SWC3YAL011W COBP00163 385 aa5.26□□□□□ -1.57
SWC3YAL011W RDS2P19541 446 aaKnown RBP5.26□□□□□ -1.57
SWC3YAL011W SPT16P32558 1035 aaKnown RBP5.26□□□□□ -1.57
SWC3YAL011W MAL31P38156 614 aa5.26□□□□□ -1.57
SWC3YAL011W ECM21P38167 1117 aaKnown RBP5.26□□□□□ -1.57
SWC3YAL011W TAT2P38967 592 aa5.26□□□□□ -1.57
SWC3YAL011W SLN1P39928 1220 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms