RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 MAG2Q06436 670 aaKnown RBP12.09□□□□□ -0.47
NME1NME1 MCD1Q12158 566 aa12.09□□□□□ -0.47
NME1NME1 PET112P33893 541 aa12.08□□□□□ -0.48
NME1NME1 MSH6Q03834 1242 aa12.08□□□□□ -0.48
NME1NME1 RSC2Q06488 889 aa12.07□□□□□ -0.48
NME1NME1 COBP00163 385 aa12.06□□□□□ -0.48
NME1NME1 YER156CP40093 338 aaKnown RBP12.06□□□□□ -0.48
NME1NME1 NNF1P47149 201 aa12.06□□□□□ -0.48
NME1NME1 NUT1P53114 1132 aa12.06□□□□□ -0.48
NME1NME1 MON1P53129 644 aa12.06□□□□□ -0.48
NME1NME1 NAM8Q00539 523 aaKnown RBP12.06□□□□□ -0.48
NME1NME1 PIN2Q12057 282 aa12.06□□□□□ -0.48
NME1NME1 MNR2P35724 969 aa12.05□□□□□ -0.48
NME1NME1 HEH2Q03281 663 aa12.05□□□□□ -0.48
NME1NME1 VPS16Q03308 798 aa12.05□□□□□ -0.48
NME1NME1 PRE9P23638 258 aaKnown RBP12.04□□□□□ -0.48
NME1NME1 PPT1P53043 513 aa12.04□□□□□ -0.48
NME1NME1 RVS167P39743 482 aaKnown RBP12.03□□□□□ -0.48
NME1NME1 YMR265CQ03508 461 aaKnown RBP12.03□□□□□ -0.48
NME1NME1 MCM5P29496 775 aaKnown RBP12.02□□□□□ -0.49
NME1NME1 ALD6P54115 500 aaKnown RBP12.02□□□□□ -0.49
NME1NME1 YPL109CQ02981 657 aa12.02□□□□□ -0.49
NME1NME1 PMT7Q06644 662 aa12.02□□□□□ -0.49
NME1NME1 IDI1P15496 288 aa12.01□□□□□ -0.49
NME1NME1 DIT1P21623 536 aa12.01□□□□□ -0.49
NME1NME1 ULP1Q02724 621 aa12.01□□□□□ -0.49
NME1NME1 OCA5P38738 679 aa12□□□□□ -0.49
NME1NME1 VAC8P39968 578 aa12□□□□□ -0.49
NME1NME1 ADI1Q03677 179 aa12□□□□□ -0.49
NME1NME1 LCB5Q06147 687 aaKnown RBP12□□□□□ -0.49
NME1NME1 UGA4P32837 571 aa11.99□□□□□ -0.49
NME1NME1 DUR3P33413 735 aa11.99□□□□□ -0.49
NME1NME1 ROG3P43602 733 aa11.99□□□□□ -0.49
NME1NME1 FUS1P11710 512 aa11.98□□□□□ -0.49
NME1NME1 FPS1P23900 669 aa11.98□□□□□ -0.49
NME1NME1 YDR444WQ04093 687 aa11.98□□□□□ -0.49
NME1NME1 YTA7P40340 1379 aa11.97□□□□□ -0.49
NME1NME1 CWC24P53769 259 aa11.97□□□□□ -0.49
NME1NME1 CUZ1P53899 274 aa11.97□□□□□ -0.49
NME1NME1 KRE33P53914 1056 aaKnown RBP11.97□□□□□ -0.49
NME1NME1 TY1A-MR1Q04215 440 aa11.97□□□□□ -0.49
NME1NME1 MET22P32179 357 aa11.96□□□□□ -0.49
NME1NME1 SAP155P43612 1002 aa11.96□□□□□ -0.49
NME1NME1 ALD3P54114 506 aa11.96□□□□□ -0.49
NME1NME1 SQT1P35184 431 aa11.95□□□□□ -0.5
NME1NME1 YJL181WP46987 611 aa11.95□□□□□ -0.5
NME1NME1 RIM11P38615 370 aa11.94□□□□□ -0.5
NME1NME1 MSC7P38694 644 aa11.94□□□□□ -0.5
NME1NME1 RSM26P47141 266 aa11.94□□□□□ -0.5
NME1NME1 YAF9P53930 226 aa11.93□□□□□ -0.5
NME1NME1 CMR1Q12510 522 aaKnown RBP11.93□□□□□ -0.5
NME1NME1 NPR1P22211 790 aa11.91□□□□□ -0.5
NME1NME1 INP51P40559 946 aaKnown RBP11.91□□□□□ -0.5
NME1NME1 ADE12P80210 433 aaKnown RBP11.91□□□□□ -0.5
NME1NME1 WRS1Q12109 432 aaKnown RBP11.91□□□□□ -0.5
NME1NME1 GLO4Q12320 285 aa11.91□□□□□ -0.5
NME1NME1 YDR461C-AQ2V2P7 80 aa11.91□□□□□ -0.5
NME1NME1 PIC2P40035 300 aa11.9□□□□□ -0.5
NME1NME1 CEM1P39525 442 aa11.89□□□□□ -0.51
NME1NME1 CDC34P14682 295 aa11.88□□□□□ -0.51
NME1NME1 SHU2P38957 223 aa11.88□□□□□ -0.51
NME1NME1 PRK1P40494 810 aa11.88□□□□□ -0.51
NME1NME1 TY1A-DR2Q03964 440 aaKnown RBP11.88□□□□□ -0.51
NME1NME1 PRP5P21372 849 aaPredicted RBP11.87□□□□□ -0.51
NME1NME1 BIO5P53744 561 aaKnown RBP11.87□□□□□ -0.51
NME1NME1 CCP1P00431 361 aa11.86□□□□□ -0.51
NME1NME1 GDE1Q02979 1223 aa11.86□□□□□ -0.51
NME1NME1 PEX28P38848 579 aa11.85□□□□□ -0.51
NME1NME1 YJR124CP47159 448 aa11.85□□□□□ -0.51
NME1NME1 PEX13P80667 386 aa11.85□□□□□ -0.51
NME1NME1 YIR007WP40566 764 aa11.84□□□□□ -0.51
NME1NME1 LYS5P50113 272 aa11.84□□□□□ -0.51
NME1NME1 SYT1Q06836 1226 aa11.84□□□□□ -0.51
NME1NME1 RTT10Q08924 1013 aa11.84□□□□□ -0.51
NME1NME1 SSF2Q12153 453 aaPredicted RBP11.84□□□□□ -0.51
NME1NME1 YOL098CQ12496 1037 aa11.84□□□□□ -0.51
NME1NME1 ACO2P39533 789 aa11.83□□□□□ -0.52
NME1NME1 NOG1Q02892 647 aaKnown RBP11.83□□□□□ -0.52
NME1NME1 MRL1Q06815 381 aa11.83□□□□□ -0.52
NME1NME1 SOG2Q08817 791 aa11.83□□□□□ -0.52
NME1NME1 GCR1P07261 785 aa11.82□□□□□ -0.52
NME1NME1 TFA2P36145 328 aa11.82□□□□□ -0.52
NME1NME1 XKS1P42826 600 aa11.82□□□□□ -0.52
NME1NME1 MRP10O75012 95 aa11.81□□□□□ -0.52
NME1NME1 HVG1P0CE11 249 aa11.81□□□□□ -0.52
NME1NME1 AMN1P38285 549 aaPredicted RBP11.81□□□□□ -0.52
NME1NME1 FET4P40988 552 aa11.81□□□□□ -0.52
NME1NME1 YJL049WP47048 450 aa11.81□□□□□ -0.52
NME1NME1 FAA4P47912 694 aaKnown RBP11.81□□□□□ -0.52
NME1NME1 FPR4Q06205 392 aaPredicted RBP11.81□□□□□ -0.52
NME1NME1 TAF13P11747 167 aa11.8□□□□□ -0.52
NME1NME1 MSH3P25336 1018 aa11.8□□□□□ -0.52
NME1NME1 CAF120P53836 1060 aa11.8□□□□□ -0.52
NME1NME1 TMA46Q12000 345 aaKnown RBP11.8□□□□□ -0.52
NME1NME1 RAD27P26793 382 aa11.79□□□□□ -0.52
NME1NME1 DUT1P33317 147 aa11.79□□□□□ -0.52
NME1NME1 YKL077WP36081 392 aa11.79□□□□□ -0.52
NME1NME1 LSB6P42951 607 aa11.79□□□□□ -0.52
NME1NME1 YGL140CP53120 1219 aa11.79□□□□□ -0.52
NME1NME1 YNR065CP53751 1116 aa11.79□□□□□ -0.52
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms