RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 MON2Q7Z3U7 1717 aa22.14■■□□□ 1.13
PHGDH-211ENST00000641213 CPSF1Q10570 1443 aaKnown RBP22.14■■□□□ 1.13
PHGDH-211ENST00000641213 SKAP1Q86WV1 359 aa22.14■■□□□ 1.13
PHGDH-211ENST00000641213 SIRT1Q96EB6 747 aa22.14■■□□□ 1.13
PHGDH-211ENST00000641213 AKAP12Q02952 1782 aa22.13■■□□□ 1.13
PHGDH-211ENST00000641213 PPIP5K1Q6PFW1 1433 aa22.13■■□□□ 1.13
PHGDH-211ENST00000641213 RARSP54136 660 aaKnown RBP22.13■■□□□ 1.13
PHGDH-211ENST00000641213 BACH2Q9BYV9 841 aa22.13■■□□□ 1.13
PHGDH-211ENST00000641213 CDC42BPGQ6DT37 1551 aa22.13■■□□□ 1.13
PHGDH-211ENST00000641213 ITSN1Q15811 1721 aa22.12■■□□□ 1.13
PHGDH-211ENST00000641213 DIAPH1O60610 1272 aaKnown RBP22.12■■□□□ 1.13
PHGDH-211ENST00000641213 ERICH6Q7L0X2 663 aa22.12■■□□□ 1.13
PHGDH-211ENST00000641213 ANP32AP39687 249 aaKnown RBP22.11■■□□□ 1.13
PHGDH-211ENST00000641213 MYH16Q9H6N6 1097 aa22.11■■□□□ 1.13
PHGDH-211ENST00000641213 EDC4Q6P2E9 1401 aaKnown RBP22.11■■□□□ 1.13
PHGDH-211ENST00000641213 TMPOP42166 694 aaKnown RBP22.1■■□□□ 1.13
PHGDH-211ENST00000641213 CANXP27824 592 aaKnown RBP22.1■■□□□ 1.13
PHGDH-211ENST00000641213 MAPK8IP3Q9UPT6 1336 aa22.09■■□□□ 1.13
PHGDH-211ENST00000641213 ADAMTS13Q76LX8 1427 aa22.08■■□□□ 1.13
PHGDH-211ENST00000641213 NUDT16Q96DE0 195 aaKnown RBP22.08■■□□□ 1.13
PHGDH-211ENST00000641213 PANK1Q8TE04 598 aa22.08■■□□□ 1.12
PHGDH-211ENST00000641213 POLKQ9UBT6 870 aa22.08■■□□□ 1.12
PHGDH-211ENST00000641213 TRIM35Q9UPQ4 493 aa22.08■■□□□ 1.12
PHGDH-211ENST00000641213 C3P01024 1663 aa22.07■■□□□ 1.12
PHGDH-211ENST00000641213 FRAT1Q92837 279 aaPredicted RBP22.07■■□□□ 1.12
PHGDH-211ENST00000641213 IPO9Q96P70 1041 aaKnown RBP22.07■■□□□ 1.12
PHGDH-211ENST00000641213 LRRC7Q96NW7 1537 aa22.06■■□□□ 1.12
PHGDH-211ENST00000641213 FBLN1P23142 703 aa22.06■■□□□ 1.12
PHGDH-211ENST00000641213 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.06■■□□□ 1.12
PHGDH-211ENST00000641213 PNNQ9H307 717 aaKnown RBP22.05■■□□□ 1.12
PHGDH-211ENST00000641213 COG6Q9Y2V7 657 aa22.05■■□□□ 1.12
PHGDH-211ENST00000641213 NOP58Q9Y2X3 529 aaKnown RBP22.05■■□□□ 1.12
PHGDH-211ENST00000641213 CCDC61Q9Y6R9 512 aa22.05■■□□□ 1.12
PHGDH-211ENST00000641213 ROBO2Q9HCK4 1378 aa22.04■■□□□ 1.12
PHGDH-211ENST00000641213 NCKAP5LQ9HCH0 1330 aa22.04■■□□□ 1.12
PHGDH-211ENST00000641213 PLEKHG1Q9ULL1 1385 aa22.04■■□□□ 1.12
PHGDH-211ENST00000641213 NME9Q86XW9 330 aa22.03■■□□□ 1.12
PHGDH-211ENST00000641213 FER1L4A9Z1Z3 1794 aa22.03■■□□□ 1.12
PHGDH-211ENST00000641213 PPM1GO15355 546 aaPredicted RBP22.03■■□□□ 1.12
PHGDH-211ENST00000641213 FCHSD2O94868 740 aa22.03■■□□□ 1.12
PHGDH-211ENST00000641213 LTKP29376 864 aa22.03■■□□□ 1.12
PHGDH-211ENST00000641213 TSR2Q969E8 191 aaKnown RBP22.02■■□□□ 1.12
PHGDH-211ENST00000641213 CLUAP1Q96AJ1 413 aa22.02■■□□□ 1.12
PHGDH-211ENST00000641213 BCL2L13Q9BXK5 485 aa22.02■■□□□ 1.12
PHGDH-211ENST00000641213 TOPAZ1Q8N9V7 1692 aa22.02■■□□□ 1.12
PHGDH-211ENST00000641213 CEBPAP49715 358 aaPredicted RBP22.02■■□□□ 1.11
PHGDH-211ENST00000641213 RIPK4P57078 832 aa22.02■■□□□ 1.11
PHGDH-211ENST00000641213 IL16Q14005 1332 aa22.01■■□□□ 1.11
PHGDH-211ENST00000641213 CT47B1P0C2W7 299 aaPredicted RBP22.01■■□□□ 1.11
PHGDH-211ENST00000641213 PRR36Q9H6K5 1346 aa22.01■■□□□ 1.11
PHGDH-211ENST00000641213 ZRANB1Q9UGI0 708 aa22■■□□□ 1.11
PHGDH-211ENST00000641213 PAK3O75914 559 aaPredicted RBP22■■□□□ 1.11
PHGDH-211ENST00000641213 IGHDP01880 384 aa22■■□□□ 1.11
PHGDH-211ENST00000641213 RSPH6AQ9H0K4 717 aa22■■□□□ 1.11
PHGDH-211ENST00000641213 CDK12Q9NYV4 1490 aaPredicted RBP21.99■■□□□ 1.11
PHGDH-211ENST00000641213 AATKQ6ZMQ8 1374 aa21.99■■□□□ 1.11
PHGDH-211ENST00000641213 RLBP1P12271 317 aa21.99■■□□□ 1.11
PHGDH-211ENST00000641213 TNNQ9UQP3 1299 aa21.99■■□□□ 1.11
PHGDH-211ENST00000641213 EMILIN1Q9Y6C2 1016 aa21.99■■□□□ 1.11
PHGDH-211ENST00000641213 EXOSC9Q06265 439 aaKnown RBP21.99■■□□□ 1.11
PHGDH-211ENST00000641213 NPM2Q86SE8 214 aaKnown RBP21.99■■□□□ 1.11
PHGDH-211ENST00000641213 NRKQ7Z2Y5 1582 aa21.98■■□□□ 1.11
PHGDH-211ENST00000641213 AAMPQ13685 434 aa21.97■■□□□ 1.11
PHGDH-211ENST00000641213 ZNF692Q9BU19 519 aaPredicted RBP21.97■■□□□ 1.11
PHGDH-211ENST00000641213 SLIT1O75093 1534 aa21.97■■□□□ 1.11
PHGDH-211ENST00000641213 PRKAR2BP31323 418 aa21.97■■□□□ 1.11
PHGDH-211ENST00000641213 COG3Q96JB2 828 aa21.97■■□□□ 1.11
PHGDH-211ENST00000641213 DLG5Q8TDM6 1919 aa21.96■■□□□ 1.11
PHGDH-211ENST00000641213 VIRMAQ69YN4 1812 aaKnown RBP21.95■■□□□ 1.1
PHGDH-211ENST00000641213 PTPRUQ92729 1446 aa21.95■■□□□ 1.1
PHGDH-211ENST00000641213 ARHGAP23Q9P227 1491 aa21.95■■□□□ 1.1
PHGDH-211ENST00000641213 IL13P35225 146 aa21.95■■□□□ 1.1
PHGDH-211ENST00000641213 ZBTB47Q9UFB7 747 aaPredicted RBP21.94■■□□□ 1.1
PHGDH-211ENST00000641213 RGS3P49796 1198 aa21.94■■□□□ 1.1
PHGDH-211ENST00000641213 EID1Q9Y6B2 187 aa21.94■■□□□ 1.1
PHGDH-211ENST00000641213 ZKSCAN2Q63HK3 967 aa21.93■■□□□ 1.1
PHGDH-211ENST00000641213 NEFMP07197 916 aa21.92■■□□□ 1.1
PHGDH-211ENST00000641213 HMOX1P09601 288 aa21.92■■□□□ 1.1
PHGDH-211ENST00000641213 SLC26A8Q96RN1 970 aa21.92■■□□□ 1.1
PHGDH-211ENST00000641213 PHACTR3Q96KR7 559 aa21.92■■□□□ 1.1
PHGDH-211ENST00000641213 FAM161AQ3B820 660 aa21.91■■□□□ 1.1
PHGDH-211ENST00000641213 SMC4Q9NTJ3 1288 aa21.91■■□□□ 1.1
PHGDH-211ENST00000641213 RRS1Q15050 365 aaKnown RBP21.91■■□□□ 1.1
PHGDH-211ENST00000641213 C8orf34Q49A92 452 aa21.91■■□□□ 1.1
PHGDH-211ENST00000641213 NALCNQ8IZF0 1738 aa21.9■■□□□ 1.1
PHGDH-211ENST00000641213 NFE2L2Q16236 605 aa21.9■■□□□ 1.1
PHGDH-211ENST00000641213 SSH1Q8WYL5 1049 aa21.9■■□□□ 1.1
PHGDH-211ENST00000641213 MVPQ14764 893 aaKnown RBP21.89■■□□□ 1.1
PHGDH-211ENST00000641213 DZIP1LQ8IYY4 767 aaKnown RBP21.89■■□□□ 1.1
PHGDH-211ENST00000641213 PMFBP1Q8TBY8 1022 aa21.89■■□□□ 1.1
PHGDH-211ENST00000641213 PCDHB15Q9Y5E8 787 aa21.89■■□□□ 1.1
PHGDH-211ENST00000641213 RGPD8O14715 1765 aaPredicted RBP21.89■■□□□ 1.1
PHGDH-211ENST00000641213 ACEP12821 1306 aa21.89■■□□□ 1.09
PHGDH-211ENST00000641213 PLEKHG3A1L390 1219 aa21.89■■□□□ 1.09
PHGDH-211ENST00000641213 PLPPR3Q6T4P5 718 aa21.88■■□□□ 1.09
PHGDH-211ENST00000641213 TTC21BQ7Z4L5 1316 aa21.88■■□□□ 1.09
PHGDH-211ENST00000641213 FTSJ3Q8IY81 847 aaKnown RBP21.87■■□□□ 1.09
PHGDH-211ENST00000641213 TBX22Q9Y458 520 aa21.87■■□□□ 1.09
PHGDH-211ENST00000641213 DIP2AQ14689 1571 aa21.87■■□□□ 1.09
PHGDH-211ENST00000641213 NUTM2FA1L443 756 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms