RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-238ENST00000640421 GGNBP2Q9H3C7 697 aa24.2■■□□□ 1.46
SPIN3-238ENST00000640421 NME9Q86XW9 330 aa24.19■■□□□ 1.46
SPIN3-238ENST00000640421 XPCQ01831 940 aaPredicted RBP24.19■■□□□ 1.46
SPIN3-238ENST00000640421 ZRANB1Q9UGI0 708 aa24.19■■□□□ 1.46
SPIN3-238ENST00000640421 ANKRD26Q9UPS8 1709 aa24.19■■□□□ 1.46
SPIN3-238ENST00000640421 NSD2O96028 1365 aa24.18■■□□□ 1.46
SPIN3-238ENST00000640421 PIK3C2AO00443 1686 aa24.17■■□□□ 1.46
SPIN3-238ENST00000640421 PSME1Q06323 249 aa24.17■■□□□ 1.46
SPIN3-238ENST00000640421 RALBP1Q15311 655 aa24.17■■□□□ 1.46
SPIN3-238ENST00000640421 TRPM3Q9HCF6 1732 aaPredicted RBP24.17■■□□□ 1.46
SPIN3-238ENST00000640421 TTC21AQ8NDW8 1320 aa24.14■■□□□ 1.45
SPIN3-238ENST00000640421 ROBO1Q9Y6N7 1651 aa24.14■■□□□ 1.45
SPIN3-238ENST00000640421 PXDNQ92626 1479 aa24.13■■□□□ 1.45
SPIN3-238ENST00000640421 KRT28Q7Z3Y7 464 aa24.13■■□□□ 1.45
SPIN3-238ENST00000640421 MORC1Q86VD1 984 aa24.13■■□□□ 1.45
SPIN3-238ENST00000640421 IQSEC2Q5JU85 1478 aa24.12■■□□□ 1.45
SPIN3-238ENST00000640421 PAK3O75914 559 aaPredicted RBP24.12■■□□□ 1.45
SPIN3-238ENST00000640421 NPHP3Q7Z494 1330 aa24.12■■□□□ 1.45
SPIN3-238ENST00000640421 BRD4O60885 1362 aaPredicted RBP24.12■■□□□ 1.45
SPIN3-238ENST00000640421 OVOS2A0A0J9YW53 1432 aa24.12■■□□□ 1.45
SPIN3-238ENST00000640421 OVOS2Q6IE36 1432 aa24.12■■□□□ 1.45
SPIN3-238ENST00000640421 MARF1Q9Y4F3 1742 aaKnown RBP24.12■■□□□ 1.45
SPIN3-238ENST00000640421 CCDC184Q52MB2 194 aa24.11■■□□□ 1.45
SPIN3-238ENST00000640421 CERKQ8TCT0 537 aa24.11■■□□□ 1.45
SPIN3-238ENST00000640421 MYBBP1AQ9BQG0 1328 aaKnown RBP24.11■■□□□ 1.45
SPIN3-238ENST00000640421 NHSL1Q5SYE7 1610 aa24.11■■□□□ 1.45
SPIN3-238ENST00000640421 TNNT2P45379 298 aaPredicted RBP24.11■■□□□ 1.45
SPIN3-238ENST00000640421 PPP2R1AP30153 589 aa24.09■■□□□ 1.45
SPIN3-238ENST00000640421 ALS2Q96Q42 1657 aa24.08■■□□□ 1.45
SPIN3-238ENST00000640421 NUTM2GQ5VZR2 741 aa24.08■■□□□ 1.45
SPIN3-238ENST00000640421 USP31Q70CQ4 1352 aa24.07■■□□□ 1.44
SPIN3-238ENST00000640421 USP54Q70EL1 1684 aa24.07■■□□□ 1.44
SPIN3-238ENST00000640421 ABTB2Q8N961 1025 aa24.07■■□□□ 1.44
SPIN3-238ENST00000640421 CCER2I3L3R5 266 aa24.07■■□□□ 1.44
SPIN3-238ENST00000640421 COG3Q96JB2 828 aa24.07■■□□□ 1.44
SPIN3-238ENST00000640421 TOM1O60784 492 aa24.06■■□□□ 1.44
SPIN3-238ENST00000640421 FBLN1P23142 703 aa24.06■■□□□ 1.44
SPIN3-238ENST00000640421 SOS2Q07890 1332 aaPredicted RBP24.05■■□□□ 1.44
SPIN3-238ENST00000640421 SBNO1A3KN83 1393 aa24.04■■□□□ 1.44
SPIN3-238ENST00000640421 UBAP1LF5GYI3 381 aa24.04■■□□□ 1.44
SPIN3-238ENST00000640421 NLRP6P59044 892 aa24.04■■□□□ 1.44
SPIN3-238ENST00000640421 NLRP13Q86W25 1043 aa24.03■■□□□ 1.44
SPIN3-238ENST00000640421 TNS3Q68CZ2 1445 aa24.03■■□□□ 1.44
SPIN3-238ENST00000640421 PIP4K2BP78356 416 aa24.02■■□□□ 1.44
SPIN3-238ENST00000640421 AHDC1Q5TGY3 1603 aaPredicted RBP24.02■■□□□ 1.44
SPIN3-238ENST00000640421 LMOD2Q6P5Q4 547 aa24.01■■□□□ 1.43
SPIN3-238ENST00000640421 SPATA31A3Q5VYP0 1347 aa24.01■■□□□ 1.43
SPIN3-238ENST00000640421 SCAF1Q9H7N4 1312 aaKnown RBP24.01■■□□□ 1.43
SPIN3-238ENST00000640421 MAP2P11137 1827 aaKnown RBP23.99■■□□□ 1.43
SPIN3-238ENST00000640421 MRS2Q9HD23 443 aa23.99■■□□□ 1.43
SPIN3-238ENST00000640421 AATKQ6ZMQ8 1374 aa23.97■■□□□ 1.43
SPIN3-238ENST00000640421 MED1Q15648 1581 aaPredicted RBP23.97■■□□□ 1.43
SPIN3-238ENST00000640421 SOX12O15370 315 aa23.97■■□□□ 1.43
SPIN3-238ENST00000640421 MTHFSP49914 203 aa23.96■■□□□ 1.43
SPIN3-238ENST00000640421 SLIT3O75094 1523 aa23.96■■□□□ 1.43
SPIN3-238ENST00000640421 RRS1Q15050 365 aaKnown RBP23.96■■□□□ 1.43
SPIN3-238ENST00000640421 POLKQ9UBT6 870 aa23.96■■□□□ 1.43
SPIN3-238ENST00000640421 USP19O94966 1318 aa23.96■■□□□ 1.43
SPIN3-238ENST00000640421 PLEKHG5O94827 1062 aa23.95■■□□□ 1.42
SPIN3-238ENST00000640421 EMILIN1Q9Y6C2 1016 aa23.95■■□□□ 1.42
SPIN3-238ENST00000640421 CRYBG1Q9Y4K1 1723 aa23.95■■□□□ 1.42
SPIN3-238ENST00000640421 NFAT5O94916 1531 aa23.95■■□□□ 1.42
SPIN3-238ENST00000640421 COL16A1Q07092 1604 aaPredicted RBP23.94■■□□□ 1.42
SPIN3-238ENST00000640421 PHLPP1O60346 1717 aa23.94■■□□□ 1.42
SPIN3-238ENST00000640421 ARHGEF10O15013 1369 aa23.94■■□□□ 1.42
SPIN3-238ENST00000640421 SMG6Q86US8 1419 aaKnown RBP23.94■■□□□ 1.42
SPIN3-238ENST00000640421 PEAK1Q9H792 1746 aa23.92■■□□□ 1.42
SPIN3-238ENST00000640421 PHRF1Q9P1Y6 1649 aaKnown RBP23.92■■□□□ 1.42
SPIN3-238ENST00000640421 CABLES1Q8TDN4 633 aa23.9■■□□□ 1.42
SPIN3-238ENST00000640421 COL3A1P02461 1466 aaPredicted RBP23.9■■□□□ 1.42
SPIN3-238ENST00000640421 MAP3K19Q56UN5 1328 aa23.89■■□□□ 1.41
SPIN3-238ENST00000640421 PPM1GO15355 546 aaPredicted RBP23.89■■□□□ 1.41
SPIN3-238ENST00000640421 GCP02774 474 aa23.89■■□□□ 1.41
SPIN3-238ENST00000640421 PNISRQ8TF01 805 aaKnown RBP23.88■■□□□ 1.41
SPIN3-238ENST00000640421 LTN1O94822 1766 aa23.88■■□□□ 1.41
SPIN3-238ENST00000640421 PNPLA6Q8IY17 1366 aa23.88■■□□□ 1.41
SPIN3-238ENST00000640421 ABCA3Q99758 1704 aa23.87■■□□□ 1.41
SPIN3-238ENST00000640421 SHPRHQ149N8 1683 aa23.87■■□□□ 1.41
SPIN3-238ENST00000640421 CDK12Q9NYV4 1490 aaPredicted RBP23.87■■□□□ 1.41
SPIN3-238ENST00000640421 LRRC59Q96AG4 307 aaKnown RBP23.87■■□□□ 1.41
SPIN3-238ENST00000640421 KCNH5Q8NCM2 988 aa23.86■■□□□ 1.41
SPIN3-238ENST00000640421 INSRP06213 1382 aa23.84■■□□□ 1.41
SPIN3-238ENST00000640421 FAM9BQ8IZU0 186 aa23.84■■□□□ 1.41
SPIN3-238ENST00000640421 COL22A1Q8NFW1 1626 aaPredicted RBP23.83■■□□□ 1.4
SPIN3-238ENST00000640421 ARHGEF25Q86VW2 580 aa23.82■■□□□ 1.4
SPIN3-238ENST00000640421 ZC3H6P61129 1189 aaKnown RBP23.81■■□□□ 1.4
SPIN3-238ENST00000640421 CFAP53Q96M91 514 aa23.81■■□□□ 1.4
SPIN3-238ENST00000640421 HSP90AB2PQ58FF8 381 aa23.81■■□□□ 1.4
SPIN3-238ENST00000640421 FLT4P35916 1363 aa23.8■■□□□ 1.4
SPIN3-238ENST00000640421 HOXC9P31274 260 aa23.79■■□□□ 1.4
SPIN3-238ENST00000640421 AMPHP49418 695 aa23.79■■□□□ 1.4
SPIN3-238ENST00000640421 ZBTB7CA1YPR0 619 aa23.78■■□□□ 1.4
SPIN3-238ENST00000640421 KIF24Q5T7B8 1368 aa23.78■■□□□ 1.4
SPIN3-238ENST00000640421 RTL1A6NKG5 1358 aa23.77■■□□□ 1.4
SPIN3-238ENST00000640421 DIAPH1O60610 1272 aaKnown RBP23.77■■□□□ 1.4
SPIN3-238ENST00000640421 KIAA0232Q92628 1395 aa23.77■■□□□ 1.39
SPIN3-238ENST00000640421 ADAMTS8Q9UP79 889 aa23.76■■□□□ 1.39
SPIN3-238ENST00000640421 COL18A1P39060 1754 aa23.75■■□□□ 1.39
SPIN3-238ENST00000640421 IL13P35225 146 aa23.75■■□□□ 1.39
SPIN3-238ENST00000640421 CPDO75976 1380 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms