RNA–Protein interactions for RNA: ENST00000639418.1

SPIN3-221, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-221ENST00000639418 GGNBP2Q9H3C7 697 aa16.77■□□□□ 0.27
SPIN3-221ENST00000639418 EXOSC9Q06265 439 aaKnown RBP16.75■□□□□ 0.27
SPIN3-221ENST00000639418 SMC4Q9NTJ3 1288 aa16.75■□□□□ 0.27
SPIN3-221ENST00000639418 ARHGAP31Q2M1Z3 1444 aa16.75■□□□□ 0.27
SPIN3-221ENST00000639418 DIP2CQ9Y2E4 1556 aa16.75■□□□□ 0.27
SPIN3-221ENST00000639418 TMPOP42166 694 aaKnown RBP16.75■□□□□ 0.27
SPIN3-221ENST00000639418 ZFYVE9O95405 1425 aa16.75■□□□□ 0.27
SPIN3-221ENST00000639418 TBC1D32Q96NH3 1257 aa16.74■□□□□ 0.27
SPIN3-221ENST00000639418 TRIM35Q9UPQ4 493 aa16.74■□□□□ 0.27
SPIN3-221ENST00000639418 COL3A1P02461 1466 aaPredicted RBP16.74■□□□□ 0.27
SPIN3-221ENST00000639418 NEO1Q92859 1461 aa16.74■□□□□ 0.27
SPIN3-221ENST00000639418 SLC52A1Q9NWF4 448 aa16.73■□□□□ 0.27
SPIN3-221ENST00000639418 TERF2IPQ9NYB0 399 aa16.73■□□□□ 0.27
SPIN3-221ENST00000639418 SLKQ9H2G2 1235 aaPredicted RBP16.72■□□□□ 0.27
SPIN3-221ENST00000639418 ATAD2Q6PL18 1390 aa16.72■□□□□ 0.27
SPIN3-221ENST00000639418 MINK1Q8N4C8 1332 aaPredicted RBP16.72■□□□□ 0.27
SPIN3-221ENST00000639418 FYB1O15117 783 aa16.72■□□□□ 0.27
SPIN3-221ENST00000639418 TRIM27P14373 513 aa16.72■□□□□ 0.27
SPIN3-221ENST00000639418 PTPRMP28827 1452 aa16.72■□□□□ 0.27
SPIN3-221ENST00000639418 SSH1Q8WYL5 1049 aa16.71■□□□□ 0.27
SPIN3-221ENST00000639418 PRAM1Q96QH2 718 aa16.71■□□□□ 0.27
SPIN3-221ENST00000639418 ANKRD26Q9UPS8 1709 aa16.71■□□□□ 0.27
SPIN3-221ENST00000639418 MYO5BQ9ULV0 1848 aa16.71■□□□□ 0.26
SPIN3-221ENST00000639418 ITPRIPQ8IWB1 547 aa16.7■□□□□ 0.26
SPIN3-221ENST00000639418 POGKQ9P215 609 aa16.7■□□□□ 0.26
SPIN3-221ENST00000639418 IL16Q14005 1332 aa16.7■□□□□ 0.26
SPIN3-221ENST00000639418 ATF7IPQ6VMQ6 1270 aa16.7■□□□□ 0.26
SPIN3-221ENST00000639418 DDX19BQ9UMR2 479 aa16.7■□□□□ 0.26
SPIN3-221ENST00000639418 MED14O60244 1454 aa16.69■□□□□ 0.26
SPIN3-221ENST00000639418 CD163L1Q9NR16 1453 aa16.69■□□□□ 0.26
SPIN3-221ENST00000639418 RIPK4P57078 832 aa16.69■□□□□ 0.26
SPIN3-221ENST00000639418 OSCARQ8IYS5 282 aa16.69■□□□□ 0.26
SPIN3-221ENST00000639418 HDAC1Q13547 482 aaPredicted RBP16.69■□□□□ 0.26
SPIN3-221ENST00000639418 NOB1Q9ULX3 412 aaKnown RBP16.69■□□□□ 0.26
SPIN3-221ENST00000639418 TMEM131LA2VDJ0 1609 aa16.68■□□□□ 0.26
SPIN3-221ENST00000639418 TBC1D2Q9BYX2 928 aa16.68■□□□□ 0.26
SPIN3-221ENST00000639418 ANTXR1Q9H6X2 564 aa16.68■□□□□ 0.26
SPIN3-221ENST00000639418 CLTCQ00610 1675 aaKnown RBP16.68■□□□□ 0.26
SPIN3-221ENST00000639418 DIAPH1O60610 1272 aaKnown RBP16.68■□□□□ 0.26
SPIN3-221ENST00000639418 YTHDC2Q9H6S0 1430 aaKnown RBP16.68■□□□□ 0.26
SPIN3-221ENST00000639418 HDGFL2Q7Z4V5 671 aaPredicted RBP16.67■□□□□ 0.26
SPIN3-221ENST00000639418 PREX1Q8TCU6 1659 aa16.67■□□□□ 0.26
SPIN3-221ENST00000639418 PNNQ9H307 717 aaKnown RBP16.67■□□□□ 0.26
SPIN3-221ENST00000639418 RICTORQ6R327 1708 aa16.66■□□□□ 0.26
SPIN3-221ENST00000639418 YEATS2Q9ULM3 1422 aa16.65■□□□□ 0.26
SPIN3-221ENST00000639418 TMEM57Q8N5G2 664 aa16.65■□□□□ 0.26
SPIN3-221ENST00000639418 CDK19Q9BWU1 502 aa16.65■□□□□ 0.26
SPIN3-221ENST00000639418 PNPLA6Q8IY17 1366 aa16.65■□□□□ 0.26
SPIN3-221ENST00000639418 KIF16BQ96L93 1317 aa16.64■□□□□ 0.25
SPIN3-221ENST00000639418 IPO8O15397 1037 aaKnown RBP16.63■□□□□ 0.25
SPIN3-221ENST00000639418 C22orf23Q9BZE7 217 aa16.63■□□□□ 0.25
SPIN3-221ENST00000639418 CABP1Q9NZU7 370 aa16.63■□□□□ 0.25
SPIN3-221ENST00000639418 MFAP1P55081 439 aaKnown RBP16.63■□□□□ 0.25
SPIN3-221ENST00000639418 SMC5Q8IY18 1101 aa16.63■□□□□ 0.25
SPIN3-221ENST00000639418 ZBTB40Q9NUA8 1239 aa16.63■□□□□ 0.25
SPIN3-221ENST00000639418 KIF20BQ96Q89 1820 aa16.63■□□□□ 0.25
SPIN3-221ENST00000639418 ALKQ9UM73 1620 aa16.62■□□□□ 0.25
SPIN3-221ENST00000639418 FCHSD2O94868 740 aa16.62■□□□□ 0.25
SPIN3-221ENST00000639418 ARHGEF40Q8TER5 1519 aa16.61■□□□□ 0.25
SPIN3-221ENST00000639418 ALDH1L2Q3SY69 923 aa16.61■□□□□ 0.25
SPIN3-221ENST00000639418 LRRC7Q96NW7 1537 aa16.61■□□□□ 0.25
SPIN3-221ENST00000639418 FBXO31Q5XUX0 539 aaPredicted RBP16.6■□□□□ 0.25
SPIN3-221ENST00000639418 SPRYD3Q8NCJ5 442 aa16.6■□□□□ 0.25
SPIN3-221ENST00000639418 CDC42BPGQ6DT37 1551 aa16.6■□□□□ 0.25
SPIN3-221ENST00000639418 PRKAR2BP31323 418 aa16.6■□□□□ 0.25
SPIN3-221ENST00000639418 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.59■□□□□ 0.25
SPIN3-221ENST00000639418 FAM43AQ8N2R8 423 aa16.58■□□□□ 0.25
SPIN3-221ENST00000639418 STAG3Q9UJ98 1225 aa16.58■□□□□ 0.25
SPIN3-221ENST00000639418 FAM135BQ49AJ0 1406 aa16.58■□□□□ 0.24
SPIN3-221ENST00000639418 NUCB1Q02818 461 aa16.58■□□□□ 0.24
SPIN3-221ENST00000639418 FBLN1P23142 703 aa16.57■□□□□ 0.24
SPIN3-221ENST00000639418 POLKQ9UBT6 870 aa16.57■□□□□ 0.24
SPIN3-221ENST00000639418 ZNF428Q96B54 188 aa16.56■□□□□ 0.24
SPIN3-221ENST00000639418 WAPLQ7Z5K2 1190 aa16.55■□□□□ 0.24
SPIN3-221ENST00000639418 LNPKQ9C0E8 428 aa16.55■□□□□ 0.24
SPIN3-221ENST00000639418 PPIP5K1Q6PFW1 1433 aa16.54■□□□□ 0.24
SPIN3-221ENST00000639418 A0A0U1RQG5 324 aaPredicted RBP16.54■□□□□ 0.24
SPIN3-221ENST00000639418 HMOX1P09601 288 aa16.54■□□□□ 0.24
SPIN3-221ENST00000639418 BRPF1P55201 1214 aaPredicted RBP16.54■□□□□ 0.24
SPIN3-221ENST00000639418 NFE2L2Q16236 605 aa16.54■□□□□ 0.24
SPIN3-221ENST00000639418 CHD1LQ86WJ1 897 aa16.54■□□□□ 0.24
SPIN3-221ENST00000639418 PHACTR3Q96KR7 559 aa16.54■□□□□ 0.24
SPIN3-221ENST00000639418 ATP7BP35670 1465 aa16.54■□□□□ 0.24
SPIN3-221ENST00000639418 CHMP5Q9NZZ3 219 aa16.53■□□□□ 0.24
SPIN3-221ENST00000639418 HSCBQ8IWL3 235 aa16.53■□□□□ 0.24
SPIN3-221ENST00000639418 THUMPD2Q9BTF0 503 aaKnown RBP16.53■□□□□ 0.24
SPIN3-221ENST00000639418 MCM4P33991 863 aa16.52■□□□□ 0.24
SPIN3-221ENST00000639418 CALD1Q05682 793 aaKnown RBP16.52■□□□□ 0.24
SPIN3-221ENST00000639418 VAMP4O75379 141 aa16.52■□□□□ 0.24
SPIN3-221ENST00000639418 DLC1Q96QB1 1528 aa16.52■□□□□ 0.23
SPIN3-221ENST00000639418 ZBTB7BO15156 539 aaPredicted RBP16.52■□□□□ 0.23
SPIN3-221ENST00000639418 L1TD1Q5T7N2 865 aaKnown RBP16.52■□□□□ 0.23
SPIN3-221ENST00000639418 MRPL50Q8N5N7 158 aaKnown RBP16.52■□□□□ 0.23
SPIN3-221ENST00000639418 MAP2P11137 1827 aaKnown RBP16.51■□□□□ 0.23
SPIN3-221ENST00000639418 RBM25P49756 843 aaKnown RBP16.51■□□□□ 0.23
SPIN3-221ENST00000639418 ARHGAP45Q92619 1136 aa16.51■□□□□ 0.23
SPIN3-221ENST00000639418 CHMP4BQ9H444 224 aaKnown RBP16.51■□□□□ 0.23
SPIN3-221ENST00000639418 TSPYL6Q8N831 410 aa16.5■□□□□ 0.23
SPIN3-221ENST00000639418 EMILIN1Q9Y6C2 1016 aa16.5■□□□□ 0.23
SPIN3-221ENST00000639418 GNAI1P63096 354 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms