RNA–Protein interactions for RNA: ENST00000638351.1

KCNMA1-233, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-233ENST00000638351 UHRF1BP1Q6BDS2 1440 aa16.09■□□□□ 0.17
KCNMA1-233ENST00000638351 HSP90AA2PQ14568 343 aaPredicted RBP16.09■□□□□ 0.17
KCNMA1-233ENST00000638351 TXNDC2Q86VQ3 553 aa16.09■□□□□ 0.17
KCNMA1-233ENST00000638351 RSPH6AQ9H0K4 717 aa16.09■□□□□ 0.17
KCNMA1-233ENST00000638351 DDX11L8A8MPP1 907 aa16.09■□□□□ 0.17
KCNMA1-233ENST00000638351 TBC1D32Q96NH3 1257 aa16.09■□□□□ 0.17
KCNMA1-233ENST00000638351 ZNF518AQ6AHZ1 1483 aa16.09■□□□□ 0.17
KCNMA1-233ENST00000638351 EIF2AK4Q9P2K8 1649 aaKnown RBP16.08■□□□□ 0.17
KCNMA1-233ENST00000638351 CD109Q6YHK3 1445 aa16.08■□□□□ 0.17
KCNMA1-233ENST00000638351 ZRANB1Q9UGI0 708 aa16.08■□□□□ 0.17
KCNMA1-233ENST00000638351 ATP10AO60312 1499 aa16.08■□□□□ 0.16
KCNMA1-233ENST00000638351 FBXO31Q5XUX0 539 aaPredicted RBP16.08■□□□□ 0.16
KCNMA1-233ENST00000638351 CHD1LQ86WJ1 897 aa16.08■□□□□ 0.16
KCNMA1-233ENST00000638351 CDK19Q9BWU1 502 aa16.08■□□□□ 0.16
KCNMA1-233ENST00000638351 XRCC6P12956 609 aaKnown RBP eCLIP16.07■□□□□ 0.16
KCNMA1-233ENST00000638351 KCNJ4P48050 445 aa16.07■□□□□ 0.16
KCNMA1-233ENST00000638351 TWISTNBQ3B726 338 aaPredicted RBP16.07■□□□□ 0.16
KCNMA1-233ENST00000638351 WDR63Q8IWG1 891 aa16.07■□□□□ 0.16
KCNMA1-233ENST00000638351 NOS1P29475 1434 aa16.07■□□□□ 0.16
KCNMA1-233ENST00000638351 CFAP65Q6ZU64 1925 aaKnown RBP16.07■□□□□ 0.16
KCNMA1-233ENST00000638351 RBM10P98175 930 aaKnown RBP16.07■□□□□ 0.16
KCNMA1-233ENST00000638351 KRT24Q2M2I5 525 aa16.07■□□□□ 0.16
KCNMA1-233ENST00000638351 NAP1L2Q9ULW6 460 aaPredicted RBP16.07■□□□□ 0.16
KCNMA1-233ENST00000638351 EIF2S2P20042 333 aaKnown RBP16.06■□□□□ 0.16
KCNMA1-233ENST00000638351 SSFA2P28290 1259 aa16.06■□□□□ 0.16
KCNMA1-233ENST00000638351 RRAGDQ9NQL2 400 aaPredicted RBP16.06■□□□□ 0.16
KCNMA1-233ENST00000638351 COL17A1Q9UMD9 1497 aaPredicted RBP16.05■□□□□ 0.16
KCNMA1-233ENST00000638351 MAP4K4O95819 1239 aaPredicted RBP16.05■□□□□ 0.16
KCNMA1-233ENST00000638351 TSPYL6Q8N831 410 aa16.05■□□□□ 0.16
KCNMA1-233ENST00000638351 COG3Q96JB2 828 aa16.05■□□□□ 0.16
KCNMA1-233ENST00000638351 LARP6Q9BRS8 491 aaKnown RBP16.05■□□□□ 0.16
KCNMA1-233ENST00000638351 KDM5CP41229 1560 aa16.05■□□□□ 0.16
KCNMA1-233ENST00000638351 NEO1Q92859 1461 aa16.05■□□□□ 0.16
KCNMA1-233ENST00000638351 DEPDC5O75140 1603 aa16.05■□□□□ 0.16
KCNMA1-233ENST00000638351 PRPF40AO75400 957 aaKnown RBP16.05■□□□□ 0.16
KCNMA1-233ENST00000638351 C16orf71Q8IYS4 520 aaPredicted RBP16.05■□□□□ 0.16
KCNMA1-233ENST00000638351 ANO2Q9NQ90 1003 aa16.05■□□□□ 0.16
KCNMA1-233ENST00000638351 ATAD2Q6PL18 1390 aa16.05■□□□□ 0.16
KCNMA1-233ENST00000638351 GRPEL1Q9HAV7 217 aa16.05■□□□□ 0.16
KCNMA1-233ENST00000638351 FAM13BQ9NYF5 915 aa16.05■□□□□ 0.16
KCNMA1-233ENST00000638351 KIF16BQ96L93 1317 aa16.04■□□□□ 0.16
KCNMA1-233ENST00000638351 NCKAP5LQ9HCH0 1330 aa16.04■□□□□ 0.16
KCNMA1-233ENST00000638351 MCM10Q7L590 875 aa16.04■□□□□ 0.16
KCNMA1-233ENST00000638351 TNPO1Q92973 898 aaKnown RBP16.04■□□□□ 0.16
KCNMA1-233ENST00000638351 SCAF11Q99590 1463 aaKnown RBP16.03■□□□□ 0.16
KCNMA1-233ENST00000638351 IDI1Q13907 227 aa16.03■□□□□ 0.16
KCNMA1-233ENST00000638351 SULT6B1Q6IMI4 303 aa16.03■□□□□ 0.16
KCNMA1-233ENST00000638351 NME9Q86XW9 330 aa16.03■□□□□ 0.16
KCNMA1-233ENST00000638351 FAM43AQ8N2R8 423 aa16.03■□□□□ 0.16
KCNMA1-233ENST00000638351 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.03■□□□□ 0.16
KCNMA1-233ENST00000638351 A0A0G2JS52 829 aa16.02■□□□□ 0.16
KCNMA1-233ENST00000638351 F6X3S4 739 aa16.02■□□□□ 0.16
KCNMA1-233ENST00000638351 CHAMP1Q96JM3 812 aa16.02■□□□□ 0.16
KCNMA1-233ENST00000638351 NASPP49321 788 aaPredicted RBP16.01■□□□□ 0.15
KCNMA1-233ENST00000638351 AMPHP49418 695 aa16.01■□□□□ 0.15
KCNMA1-233ENST00000638351 DDX54Q8TDD1 881 aaKnown RBP16.01■□□□□ 0.15
KCNMA1-233ENST00000638351 POGZQ7Z3K3 1410 aa16.01■□□□□ 0.15
KCNMA1-233ENST00000638351 MRE11P49959 708 aa16.01■□□□□ 0.15
KCNMA1-233ENST00000638351 FKBP5Q13451 457 aaPredicted RBP16.01■□□□□ 0.15
KCNMA1-233ENST00000638351 CHMP4BQ9H444 224 aaKnown RBP16.01■□□□□ 0.15
KCNMA1-233ENST00000638351 EXOC6BQ9Y2D4 811 aa16.01■□□□□ 0.15
KCNMA1-233ENST00000638351 NEK4P51957 841 aa16■□□□□ 0.15
KCNMA1-233ENST00000638351 NGDNQ8NEJ9 315 aaKnown RBP16■□□□□ 0.15
KCNMA1-233ENST00000638351 PHACTR3Q96KR7 559 aa16■□□□□ 0.15
KCNMA1-233ENST00000638351 TET3O43151 1660 aa16■□□□□ 0.15
KCNMA1-233ENST00000638351 STK31Q9BXU1 1019 aa16■□□□□ 0.15
KCNMA1-233ENST00000638351 MLH3Q9UHC1 1453 aa16■□□□□ 0.15
KCNMA1-233ENST00000638351 ST18O60284 1047 aa15.99■□□□□ 0.15
KCNMA1-233ENST00000638351 R3HCC1Q9Y3T6 440 aaKnown RBP15.99■□□□□ 0.15
KCNMA1-233ENST00000638351 GLI2P10070 1586 aa15.99■□□□□ 0.15
KCNMA1-233ENST00000638351 NGEFQ8N5V2 710 aa15.99■□□□□ 0.15
KCNMA1-233ENST00000638351 SLC4A2P04920 1241 aa15.99■□□□□ 0.15
KCNMA1-233ENST00000638351 PRDM15P57071 1507 aaPredicted RBP15.99■□□□□ 0.15
KCNMA1-233ENST00000638351 ASXL1Q8IXJ9 1541 aa15.99■□□□□ 0.15
KCNMA1-233ENST00000638351 POLR1AO95602 1720 aaPredicted RBP15.98■□□□□ 0.15
KCNMA1-233ENST00000638351 PLA2R1Q13018 1463 aa15.98■□□□□ 0.15
KCNMA1-233ENST00000638351 CCDC27Q2M243 656 aa15.98■□□□□ 0.15
KCNMA1-233ENST00000638351 TBC1D9Q6ZT07 1266 aa15.98■□□□□ 0.15
KCNMA1-233ENST00000638351 VWDEQ8N2E2 1590 aa15.98■□□□□ 0.15
KCNMA1-233ENST00000638351 STAC3Q96MF2 364 aa15.98■□□□□ 0.15
KCNMA1-233ENST00000638351 UPF3BQ9BZI7 483 aaKnown RBP15.98■□□□□ 0.15
KCNMA1-233ENST00000638351 GDPD2Q9HCC8 539 aa15.98■□□□□ 0.15
KCNMA1-233ENST00000638351 FYB1O15117 783 aa15.98■□□□□ 0.15
KCNMA1-233ENST00000638351 CDC45O75419 566 aa15.98■□□□□ 0.15
KCNMA1-233ENST00000638351 GNAI1P63096 354 aa15.98■□□□□ 0.15
KCNMA1-233ENST00000638351 BLMP54132 1417 aaPredicted RBP15.97■□□□□ 0.15
KCNMA1-233ENST00000638351 IL1RAPL2Q9NP60 686 aa15.97■□□□□ 0.15
KCNMA1-233ENST00000638351 HECW2Q9P2P5 1572 aa15.97■□□□□ 0.15
KCNMA1-233ENST00000638351 RBM27Q9P2N5 1060 aaKnown RBP15.97■□□□□ 0.15
KCNMA1-233ENST00000638351 KIDINS220Q9ULH0 1771 aa15.97■□□□□ 0.15
KCNMA1-233ENST00000638351 RIMBP3CA6NJZ7 1639 aa15.97■□□□□ 0.15
KCNMA1-233ENST00000638351 RIMBP3BA6NNM3 1639 aa15.97■□□□□ 0.15
KCNMA1-233ENST00000638351 RIMBP3Q9UFD9 1639 aa15.97■□□□□ 0.15
KCNMA1-233ENST00000638351 ESPNB1AK53 854 aa15.97■□□□□ 0.15
KCNMA1-233ENST00000638351 TSPYL4Q9UJ04 414 aa15.97■□□□□ 0.15
KCNMA1-233ENST00000638351 OTUD7AQ8TE49 926 aaPredicted RBP15.96■□□□□ 0.15
KCNMA1-233ENST00000638351 TRPM2O94759 1503 aa15.96■□□□□ 0.15
KCNMA1-233ENST00000638351 K7ELQ4 463 aaPredicted RBP15.96■□□□□ 0.15
KCNMA1-233ENST00000638351 RBM33Q96EV2 1170 aaKnown RBP15.96■□□□□ 0.15
KCNMA1-233ENST00000638351 ZMYM4Q5VZL5 1548 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms