RNA–Protein interactions for RNA: ENST00000638237.1

NECAP1-210, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NECAP1, Length 2,517 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-210ENST00000638237 CABP1Q9NZU7 370 aa11.13□□□□□ -0.63
NECAP1-210ENST00000638237 KIF20BQ96Q89 1820 aa11.13□□□□□ -0.63
NECAP1-210ENST00000638237 MAP2P11137 1827 aaKnown RBP11.13□□□□□ -0.63
NECAP1-210ENST00000638237 VIRMAQ69YN4 1812 aaKnown RBP11.13□□□□□ -0.63
NECAP1-210ENST00000638237 RGS3P49796 1198 aa11.13□□□□□ -0.63
NECAP1-210ENST00000638237 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.13□□□□□ -0.63
NECAP1-210ENST00000638237 COG6Q9Y2V7 657 aa11.12□□□□□ -0.63
NECAP1-210ENST00000638237 NLRP1Q9C000 1473 aa11.12□□□□□ -0.63
NECAP1-210ENST00000638237 FRAT2O75474 233 aaPredicted RBP11.12□□□□□ -0.63
NECAP1-210ENST00000638237 CANXP27824 592 aaKnown RBP11.12□□□□□ -0.63
NECAP1-210ENST00000638237 SPATA31D1Q6ZQQ2 1576 aa11.12□□□□□ -0.63
NECAP1-210ENST00000638237 ARHGEF40Q8TER5 1519 aa11.12□□□□□ -0.63
NECAP1-210ENST00000638237 NSD2O96028 1365 aa11.12□□□□□ -0.63
NECAP1-210ENST00000638237 ATAD2Q6PL18 1390 aa11.12□□□□□ -0.63
NECAP1-210ENST00000638237 RIMS2Q9UQ26 1411 aa11.11□□□□□ -0.63
NECAP1-210ENST00000638237 NRXN3Q9Y4C0 1643 aa11.11□□□□□ -0.63
NECAP1-210ENST00000638237 REREQ9P2R6 1566 aa11.11□□□□□ -0.63
NECAP1-210ENST00000638237 PUS7Q96PZ0 661 aaKnown RBP11.11□□□□□ -0.63
NECAP1-210ENST00000638237 AGLP35573 1532 aa11.11□□□□□ -0.63
NECAP1-210ENST00000638237 NGEFQ8N5V2 710 aa11.1□□□□□ -0.63
NECAP1-210ENST00000638237 TSR2Q969E8 191 aaKnown RBP11.1□□□□□ -0.63
NECAP1-210ENST00000638237 NCKAP5LQ9HCH0 1330 aa11.1□□□□□ -0.63
NECAP1-210ENST00000638237 ADGRB2O60241 1585 aa11.1□□□□□ -0.63
NECAP1-210ENST00000638237 COL3A1P02461 1466 aaPredicted RBP11.1□□□□□ -0.63
NECAP1-210ENST00000638237 CLUAP1Q96AJ1 413 aa11.1□□□□□ -0.63
NECAP1-210ENST00000638237 TERF2IPQ9NYB0 399 aa11.1□□□□□ -0.63
NECAP1-210ENST00000638237 RLBP1P12271 317 aa11.09□□□□□ -0.63
NECAP1-210ENST00000638237 IGHDP01880 384 aa11.09□□□□□ -0.63
NECAP1-210ENST00000638237 RARSP54136 660 aaKnown RBP11.09□□□□□ -0.63
NECAP1-210ENST00000638237 PDE3AQ14432 1141 aa11.09□□□□□ -0.63
NECAP1-210ENST00000638237 USP19O94966 1318 aa11.09□□□□□ -0.63
NECAP1-210ENST00000638237 METP08581 1390 aa11.09□□□□□ -0.63
NECAP1-210ENST00000638237 NINLQ9Y2I6 1382 aa11.09□□□□□ -0.63
NECAP1-210ENST00000638237 TXNDC2Q86VQ3 553 aa11.08□□□□□ -0.64
NECAP1-210ENST00000638237 MAPK8IP3Q9UPT6 1336 aa11.08□□□□□ -0.64
NECAP1-210ENST00000638237 HDGFL2Q7Z4V5 671 aaPredicted RBP11.07□□□□□ -0.64
NECAP1-210ENST00000638237 PLEKHF1Q96S99 279 aa11.07□□□□□ -0.64
NECAP1-210ENST00000638237 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.07□□□□□ -0.64
NECAP1-210ENST00000638237 ZRANB1Q9UGI0 708 aa11.07□□□□□ -0.64
NECAP1-210ENST00000638237 ZMYM3Q14202 1370 aa11.06□□□□□ -0.64
NECAP1-210ENST00000638237 ESF1Q9H501 851 aaKnown RBP11.06□□□□□ -0.64
NECAP1-210ENST00000638237 TMPOP42166 694 aaKnown RBP11.06□□□□□ -0.64
NECAP1-210ENST00000638237 MAPK8IP2Q13387 824 aaPredicted RBP11.06□□□□□ -0.64
NECAP1-210ENST00000638237 WDR63Q8IWG1 891 aa11.06□□□□□ -0.64
NECAP1-210ENST00000638237 TRIM35Q9UPQ4 493 aa11.05□□□□□ -0.64
NECAP1-210ENST00000638237 LRRC7Q96NW7 1537 aa11.05□□□□□ -0.64
NECAP1-210ENST00000638237 BECN1Q14457 450 aa11.05□□□□□ -0.64
NECAP1-210ENST00000638237 NUTM2FA1L443 756 aa11.04□□□□□ -0.64
NECAP1-210ENST00000638237 CCDC27Q2M243 656 aa11.04□□□□□ -0.64
NECAP1-210ENST00000638237 NME9Q86XW9 330 aa11.04□□□□□ -0.64
NECAP1-210ENST00000638237 FAM43AQ8N2R8 423 aa11.04□□□□□ -0.64
NECAP1-210ENST00000638237 DIAPH1O60610 1272 aaKnown RBP11.04□□□□□ -0.64
NECAP1-210ENST00000638237 HMOX1P09601 288 aa11.04□□□□□ -0.64
NECAP1-210ENST00000638237 EMILIN1Q9Y6C2 1016 aa11.04□□□□□ -0.64
NECAP1-210ENST00000638237 PPIP5K1Q6PFW1 1433 aa11.04□□□□□ -0.64
NECAP1-210ENST00000638237 DLC1Q96QB1 1528 aa11.04□□□□□ -0.64
NECAP1-210ENST00000638237 MED14O60244 1454 aa11.03□□□□□ -0.64
NECAP1-210ENST00000638237 SEC24BO95487 1268 aa11.03□□□□□ -0.64
NECAP1-210ENST00000638237 EXOSC9Q06265 439 aaKnown RBP11.03□□□□□ -0.64
NECAP1-210ENST00000638237 AAMPQ13685 434 aa11.03□□□□□ -0.64
NECAP1-210ENST00000638237 DLG5Q8TDM6 1919 aa11.03□□□□□ -0.64
NECAP1-210ENST00000638237 UBR1Q8IWV7 1749 aa11.03□□□□□ -0.64
NECAP1-210ENST00000638237 RIPK4P57078 832 aa11.03□□□□□ -0.64
NECAP1-210ENST00000638237 MYH16Q9H6N6 1097 aa11.03□□□□□ -0.64
NECAP1-210ENST00000638237 POLKQ9UBT6 870 aa11.03□□□□□ -0.64
NECAP1-210ENST00000638237 PCDHB15Q9Y5E8 787 aa11.03□□□□□ -0.64
NECAP1-210ENST00000638237 WASLO00401 505 aaPredicted RBP11.02□□□□□ -0.64
NECAP1-210ENST00000638237 CEBPAP49715 358 aaPredicted RBP11.02□□□□□ -0.64
NECAP1-210ENST00000638237 ATP7BP35670 1465 aa11.02□□□□□ -0.65
NECAP1-210ENST00000638237 CPS1P31327 1500 aa11.01□□□□□ -0.65
NECAP1-210ENST00000638237 PRKAR2BP31323 418 aa11.01□□□□□ -0.65
NECAP1-210ENST00000638237 RRS1Q15050 365 aaKnown RBP11.01□□□□□ -0.65
NECAP1-210ENST00000638237 THUMPD2Q9BTF0 503 aaKnown RBP11.01□□□□□ -0.65
NECAP1-210ENST00000638237 PNPLA6Q8IY17 1366 aa11.01□□□□□ -0.65
NECAP1-210ENST00000638237 SMC4Q9NTJ3 1288 aa11.01□□□□□ -0.65
NECAP1-210ENST00000638237 ITSN1Q15811 1721 aa11.01□□□□□ -0.65
NECAP1-210ENST00000638237 TNRQ92752 1358 aa11□□□□□ -0.65
NECAP1-210ENST00000638237 PMFBP1Q8TBY8 1022 aa11□□□□□ -0.65
NECAP1-210ENST00000638237 NUDT16Q96DE0 195 aaKnown RBP11□□□□□ -0.65
NECAP1-210ENST00000638237 PHACTR3Q96KR7 559 aa11□□□□□ -0.65
NECAP1-210ENST00000638237 ANTXR1Q9H6X2 564 aa11□□□□□ -0.65
NECAP1-210ENST00000638237 MON2Q7Z3U7 1717 aa11□□□□□ -0.65
NECAP1-210ENST00000638237 KNDC1Q76NI1 1749 aa11□□□□□ -0.65
NECAP1-210ENST00000638237 SSH1Q8WYL5 1049 aa11□□□□□ -0.65
NECAP1-210ENST00000638237 PRR36Q9H6K5 1346 aa11□□□□□ -0.65
NECAP1-210ENST00000638237 AKAP12Q02952 1782 aa10.99□□□□□ -0.65
NECAP1-210ENST00000638237 RSPH6AQ9H0K4 717 aa10.99□□□□□ -0.65
NECAP1-210ENST00000638237 RNF39Q9H2S5 420 aa10.99□□□□□ -0.65
NECAP1-210ENST00000638237 ROBO2Q9HCK4 1378 aa10.99□□□□□ -0.65
NECAP1-210ENST00000638237 CPSF1Q10570 1443 aaKnown RBP10.99□□□□□ -0.65
NECAP1-210ENST00000638237 FTSJ3Q8IY81 847 aaKnown RBP10.99□□□□□ -0.65
NECAP1-210ENST00000638237 UPF2Q9HAU5 1272 aaKnown RBP10.99□□□□□ -0.65
NECAP1-210ENST00000638237 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.98□□□□□ -0.65
NECAP1-210ENST00000638237 TRIM27P14373 513 aa10.98□□□□□ -0.65
NECAP1-210ENST00000638237 LTKP29376 864 aa10.98□□□□□ -0.65
NECAP1-210ENST00000638237 TBC1D32Q96NH3 1257 aa10.98□□□□□ -0.65
NECAP1-210ENST00000638237 SLC26A8Q96RN1 970 aa10.98□□□□□ -0.65
NECAP1-210ENST00000638237 FAM135BQ49AJ0 1406 aa10.98□□□□□ -0.65
NECAP1-210ENST00000638237 EDC4Q6P2E9 1401 aaKnown RBP10.98□□□□□ -0.65
NECAP1-210ENST00000638237 L1TD1Q5T7N2 865 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms