RNA–Protein interactions for RNA: ENST00000636010.1

SPTAN1-229, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 1,472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-229ENST00000636010 CABP1Q9NZU7 370 aa16.3■□□□□ 0.2
SPTAN1-229ENST00000636010 PLEKHG5O94827 1062 aa16.29■□□□□ 0.2
SPTAN1-229ENST00000636010 USP6P35125 1406 aa16.28■□□□□ 0.2
SPTAN1-229ENST00000636010 ATAD2Q6PL18 1390 aa16.28■□□□□ 0.2
SPTAN1-229ENST00000636010 ZNF772Q68DY9 489 aaPredicted RBP16.28■□□□□ 0.2
SPTAN1-229ENST00000636010 CABLES1Q8TDN4 633 aa16.28■□□□□ 0.2
SPTAN1-229ENST00000636010 LMOD2Q6P5Q4 547 aa16.27■□□□□ 0.19
SPTAN1-229ENST00000636010 CPSF1Q10570 1443 aaKnown RBP16.27■□□□□ 0.19
SPTAN1-229ENST00000636010 SSH2Q76I76 1423 aa16.27■□□□□ 0.19
SPTAN1-229ENST00000636010 USP54Q70EL1 1684 aa16.26■□□□□ 0.19
SPTAN1-229ENST00000636010 NRAPQ86VF7 1730 aa16.25■□□□□ 0.19
SPTAN1-229ENST00000636010 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.25■□□□□ 0.19
SPTAN1-229ENST00000636010 PAK3O75914 559 aaPredicted RBP16.25■□□□□ 0.19
SPTAN1-229ENST00000636010 ADAMTS2O95450 1211 aa16.25■□□□□ 0.19
SPTAN1-229ENST00000636010 HSPA5P11021 654 aaKnown RBP16.25■□□□□ 0.19
SPTAN1-229ENST00000636010 ARHGEF10O15013 1369 aa16.25■□□□□ 0.19
SPTAN1-229ENST00000636010 RGPD5Q99666 1765 aa16.24■□□□□ 0.19
SPTAN1-229ENST00000636010 KIF20BQ96Q89 1820 aa16.24■□□□□ 0.19
SPTAN1-229ENST00000636010 NWD2Q9ULI1 1742 aa16.23■□□□□ 0.19
SPTAN1-229ENST00000636010 NUTM2GQ5VZR2 741 aa16.23■□□□□ 0.19
SPTAN1-229ENST00000636010 SLC12A5Q9H2X9 1139 aa16.23■□□□□ 0.19
SPTAN1-229ENST00000636010 C8orf37Q96NL8 207 aa16.22■□□□□ 0.19
SPTAN1-229ENST00000636010 A0A1W2PP64 1363 aa16.22■□□□□ 0.19
SPTAN1-229ENST00000636010 LTN1O94822 1766 aa16.21■□□□□ 0.19
SPTAN1-229ENST00000636010 COL14A1Q05707 1796 aaKnown RBP16.21■□□□□ 0.19
SPTAN1-229ENST00000636010 EIF4G2P78344 907 aaKnown RBP eCLIP16.21■□□□□ 0.19
SPTAN1-229ENST00000636010 TMF1P82094 1093 aa16.21■□□□□ 0.19
SPTAN1-229ENST00000636010 TMC1Q8TDI8 760 aa16.21■□□□□ 0.19
SPTAN1-229ENST00000636010 AFF2P51816 1311 aa16.2■□□□□ 0.18
SPTAN1-229ENST00000636010 SLIT3O75094 1523 aa16.2■□□□□ 0.18
SPTAN1-229ENST00000636010 KTN1Q86UP2 1357 aaKnown RBP16.2■□□□□ 0.18
SPTAN1-229ENST00000636010 PUS7Q96PZ0 661 aaKnown RBP16.18■□□□□ 0.18
SPTAN1-229ENST00000636010 COL18A1P39060 1754 aa16.18■□□□□ 0.18
SPTAN1-229ENST00000636010 LMO7Q8WWI1 1683 aa16.18■□□□□ 0.18
SPTAN1-229ENST00000636010 TTC21BQ7Z4L5 1316 aa16.18■□□□□ 0.18
SPTAN1-229ENST00000636010 SLIT2O94813 1529 aa16.17■□□□□ 0.18
SPTAN1-229ENST00000636010 RXRBP28702 533 aa16.17■□□□□ 0.18
SPTAN1-229ENST00000636010 ABTB2Q8N961 1025 aa16.17■□□□□ 0.18
SPTAN1-229ENST00000636010 C11orf95C9JLR9 678 aaPredicted RBP16.16■□□□□ 0.18
SPTAN1-229ENST00000636010 BCL9LQ86UU0 1499 aa16.16■□□□□ 0.18
SPTAN1-229ENST00000636010 USP19O94966 1318 aa16.16■□□□□ 0.18
SPTAN1-229ENST00000636010 BRD4O60885 1362 aaPredicted RBP16.16■□□□□ 0.18
SPTAN1-229ENST00000636010 ZRANB1Q9UGI0 708 aa16.16■□□□□ 0.18
SPTAN1-229ENST00000636010 EDC4Q6P2E9 1401 aaKnown RBP16.15■□□□□ 0.18
SPTAN1-229ENST00000636010 HAP1P54257 671 aaPredicted RBP16.15■□□□□ 0.18
SPTAN1-229ENST00000636010 NGLY1Q96IV0 654 aa16.15■□□□□ 0.18
SPTAN1-229ENST00000636010 ZNF692Q9BU19 519 aaPredicted RBP16.15■□□□□ 0.18
SPTAN1-229ENST00000636010 ANKRD26Q9UPS8 1709 aa16.15■□□□□ 0.18
SPTAN1-229ENST00000636010 NFAT5O94916 1531 aa16.15■□□□□ 0.18
SPTAN1-229ENST00000636010 GLI3P10071 1580 aa16.14■□□□□ 0.17
SPTAN1-229ENST00000636010 ANKRD36BQ8N2N9 1353 aa16.14■□□□□ 0.17
SPTAN1-229ENST00000636010 NINLQ9Y2I6 1382 aa16.14■□□□□ 0.17
SPTAN1-229ENST00000636010 BRWD3Q6RI45 1802 aa16.14■□□□□ 0.17
SPTAN1-229ENST00000636010 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.14■□□□□ 0.17
SPTAN1-229ENST00000636010 SLC24A1O60721 1099 aa16.13■□□□□ 0.17
SPTAN1-229ENST00000636010 NME9Q86XW9 330 aa16.13■□□□□ 0.17
SPTAN1-229ENST00000636010 UPF1Q92900 1129 aaKnown RBP eCLIP16.13■□□□□ 0.17
SPTAN1-229ENST00000636010 KIAA0232Q92628 1395 aa16.13■□□□□ 0.17
SPTAN1-229ENST00000636010 HDGFL2Q7Z4V5 671 aaPredicted RBP16.12■□□□□ 0.17
SPTAN1-229ENST00000636010 FNBP4Q8N3X1 1017 aaPredicted RBP16.12■□□□□ 0.17
SPTAN1-229ENST00000636010 POLR3GLQ9BT43 218 aa16.12■□□□□ 0.17
SPTAN1-229ENST00000636010 TTC21AQ8NDW8 1320 aa16.12■□□□□ 0.17
SPTAN1-229ENST00000636010 CDK12Q9NYV4 1490 aaPredicted RBP16.12■□□□□ 0.17
SPTAN1-229ENST00000636010 FAM83GA6ND36 823 aa16.11■□□□□ 0.17
SPTAN1-229ENST00000636010 NLRP6P59044 892 aa16.11■□□□□ 0.17
SPTAN1-229ENST00000636010 ZC3H6P61129 1189 aaKnown RBP16.11■□□□□ 0.17
SPTAN1-229ENST00000636010 USP21Q9UK80 565 aa16.11■□□□□ 0.17
SPTAN1-229ENST00000636010 OVOS2A0A0J9YW53 1432 aa16.11■□□□□ 0.17
SPTAN1-229ENST00000636010 ATRNO75882 1429 aa16.11■□□□□ 0.17
SPTAN1-229ENST00000636010 OVOS2Q6IE36 1432 aa16.11■□□□□ 0.17
SPTAN1-229ENST00000636010 CAMTA1Q9Y6Y1 1673 aa16.11■□□□□ 0.17
SPTAN1-229ENST00000636010 TERF2IPQ9NYB0 399 aa16.1■□□□□ 0.17
SPTAN1-229ENST00000636010 CHRNA2Q15822 529 aa16.1■□□□□ 0.17
SPTAN1-229ENST00000636010 NLRP13Q86W25 1043 aa16.1■□□□□ 0.17
SPTAN1-229ENST00000636010 WNK3Q9BYP7 1800 aa16.09■□□□□ 0.17
SPTAN1-229ENST00000636010 USP31Q70CQ4 1352 aa16.09■□□□□ 0.17
SPTAN1-229ENST00000636010 CDCA8Q53HL2 280 aa16.09■□□□□ 0.17
SPTAN1-229ENST00000636010 MAP2P11137 1827 aaKnown RBP16.08■□□□□ 0.17
SPTAN1-229ENST00000636010 RGPD2P0DJD1 1756 aa16.08■□□□□ 0.16
SPTAN1-229ENST00000636010 NSD3Q9BZ95 1437 aa16.08■□□□□ 0.16
SPTAN1-229ENST00000636010 GCP02774 474 aa16.08■□□□□ 0.16
SPTAN1-229ENST00000636010 CARD14Q9BXL6 1004 aa16.08■□□□□ 0.16
SPTAN1-229ENST00000636010 KIF7Q2M1P5 1343 aa16.07■□□□□ 0.16
SPTAN1-229ENST00000636010 SOX12O15370 315 aa16.07■□□□□ 0.16
SPTAN1-229ENST00000636010 QTRT2Q9H974 415 aaKnown RBP16.07■□□□□ 0.16
SPTAN1-229ENST00000636010 PRDM11Q9NQV5 511 aa16.07■□□□□ 0.16
SPTAN1-229ENST00000636010 RGS12O14924 1447 aa16.06■□□□□ 0.16
SPTAN1-229ENST00000636010 CPDO75976 1380 aa16.06■□□□□ 0.16
SPTAN1-229ENST00000636010 RBM6P78332 1123 aaKnown RBP16.06■□□□□ 0.16
SPTAN1-229ENST00000636010 BTG4Q9NY30 223 aa16.06■□□□□ 0.16
SPTAN1-229ENST00000636010 PEAK1Q9H792 1746 aa16.05■□□□□ 0.16
SPTAN1-229ENST00000636010 UNC5CLQ8IV45 518 aa16.04■□□□□ 0.16
SPTAN1-229ENST00000636010 COL5A2P05997 1499 aaPredicted RBP16.03■□□□□ 0.16
SPTAN1-229ENST00000636010 ZBTB7CA1YPR0 619 aa16.03■□□□□ 0.16
SPTAN1-229ENST00000636010 TRPC5Q9UL62 973 aaPredicted RBP16.03■□□□□ 0.16
SPTAN1-229ENST00000636010 GGNBP2Q9H3C7 697 aa16.03■□□□□ 0.16
SPTAN1-229ENST00000636010 CCDC7Q96M83 1385 aa16.02■□□□□ 0.16
SPTAN1-229ENST00000636010 THSD7AQ9UPZ6 1657 aa16.02■□□□□ 0.16
SPTAN1-229ENST00000636010 WASHC2AQ641Q2 1341 aa16.02■□□□□ 0.16
SPTAN1-229ENST00000636010 FYB1O15117 783 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms