RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 TERF2IPQ9NYB0 399 aa11.52□□□□□ -0.57
MECP2-220ENST00000631210 NPHP3Q7Z494 1330 aa11.52□□□□□ -0.57
MECP2-220ENST00000631210 TTC21BQ7Z4L5 1316 aa11.52□□□□□ -0.57
MECP2-220ENST00000631210 USP54Q70EL1 1684 aa11.52□□□□□ -0.57
MECP2-220ENST00000631210 AMER1Q5JTC6 1135 aaPredicted RBP11.51□□□□□ -0.57
MECP2-220ENST00000631210 ZRANB1Q9UGI0 708 aa11.51□□□□□ -0.57
MECP2-220ENST00000631210 SBNO1A3KN83 1393 aa11.51□□□□□ -0.57
MECP2-220ENST00000631210 BRD4O60885 1362 aaPredicted RBP11.51□□□□□ -0.57
MECP2-220ENST00000631210 PHLPP1O60346 1717 aa11.5□□□□□ -0.57
MECP2-220ENST00000631210 CRYBG1Q9Y4K1 1723 aa11.5□□□□□ -0.57
MECP2-220ENST00000631210 HDGFL2Q7Z4V5 671 aaPredicted RBP11.5□□□□□ -0.57
MECP2-220ENST00000631210 SPATA31A3Q5VYP0 1347 aa11.5□□□□□ -0.57
MECP2-220ENST00000631210 FYB1O15117 783 aa11.49□□□□□ -0.57
MECP2-220ENST00000631210 PSME1Q06323 249 aa11.49□□□□□ -0.57
MECP2-220ENST00000631210 NME9Q86XW9 330 aa11.49□□□□□ -0.57
MECP2-220ENST00000631210 USP31Q70CQ4 1352 aa11.49□□□□□ -0.57
MECP2-220ENST00000631210 OVOS2A0A0J9YW53 1432 aa11.49□□□□□ -0.57
MECP2-220ENST00000631210 TNS3Q68CZ2 1445 aa11.49□□□□□ -0.57
MECP2-220ENST00000631210 OVOS2Q6IE36 1432 aa11.49□□□□□ -0.57
MECP2-220ENST00000631210 KIF20BQ96Q89 1820 aa11.49□□□□□ -0.57
MECP2-220ENST00000631210 NPC1L1Q9UHC9 1359 aa11.48□□□□□ -0.57
MECP2-220ENST00000631210 MED1Q15648 1581 aaPredicted RBP11.48□□□□□ -0.57
MECP2-220ENST00000631210 ANKRD26Q9UPS8 1709 aa11.47□□□□□ -0.57
MECP2-220ENST00000631210 TTC21AQ8NDW8 1320 aa11.47□□□□□ -0.57
MECP2-220ENST00000631210 HSPA1LP34931 641 aa11.47□□□□□ -0.57
MECP2-220ENST00000631210 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.47□□□□□ -0.575e-7■■■■□ 20.4
MECP2-220ENST00000631210 FBXO41Q8TF61 875 aa11.47□□□□□ -0.57
MECP2-220ENST00000631210 COL22A1Q8NFW1 1626 aaPredicted RBP11.46□□□□□ -0.57
MECP2-220ENST00000631210 USP19O94966 1318 aa11.46□□□□□ -0.57
MECP2-220ENST00000631210 SCAF1Q9H7N4 1312 aaKnown RBP11.46□□□□□ -0.57
MECP2-220ENST00000631210 ABCA3Q99758 1704 aa11.46□□□□□ -0.58
MECP2-220ENST00000631210 SLIT3O75094 1523 aa11.45□□□□□ -0.58
MECP2-220ENST00000631210 PNPLA6Q8IY17 1366 aa11.45□□□□□ -0.58
MECP2-220ENST00000631210 GGNBP2Q9H3C7 697 aa11.45□□□□□ -0.58
MECP2-220ENST00000631210 CGNL1Q0VF96 1302 aa11.44□□□□□ -0.58
MECP2-220ENST00000631210 SHPRHQ149N8 1683 aa11.44□□□□□ -0.58
MECP2-220ENST00000631210 NUTM2GQ5VZR2 741 aa11.44□□□□□ -0.58
MECP2-220ENST00000631210 KNSTRNQ9Y448 316 aa11.44□□□□□ -0.58
MECP2-220ENST00000631210 PHRF1Q9P1Y6 1649 aaKnown RBP11.44□□□□□ -0.58
MECP2-220ENST00000631210 NFAT5O94916 1531 aa11.44□□□□□ -0.58
MECP2-220ENST00000631210 PAK3O75914 559 aaPredicted RBP11.43□□□□□ -0.58
MECP2-220ENST00000631210 FBLN1P23142 703 aa11.43□□□□□ -0.58
MECP2-220ENST00000631210 ABTB2Q8N961 1025 aa11.43□□□□□ -0.58
MECP2-220ENST00000631210 LRRC59Q96AG4 307 aaKnown RBP11.43□□□□□ -0.58
MECP2-220ENST00000631210 ARHGEF10O15013 1369 aa11.42□□□□□ -0.58
MECP2-220ENST00000631210 NSD2O96028 1365 aa11.42□□□□□ -0.58
MECP2-220ENST00000631210 PARD3Q8TEW0 1356 aa11.42□□□□□ -0.58
MECP2-220ENST00000631210 ILDR1Q86SU0 546 aaPredicted RBP11.42□□□□□ -0.58
MECP2-220ENST00000631210 CABLES1Q8TDN4 633 aa11.42□□□□□ -0.58
MECP2-220ENST00000631210 NLRP6P59044 892 aa11.41□□□□□ -0.58
MECP2-220ENST00000631210 CC2D1BQ5T0F9 858 aaKnown RBP11.41□□□□□ -0.58
MECP2-220ENST00000631210 NLRP13Q86W25 1043 aa11.4□□□□□ -0.58
MECP2-220ENST00000631210 JCADQ9P266 1359 aa11.4□□□□□ -0.59
MECP2-220ENST00000631210 LRP6O75581 1613 aa11.39□□□□□ -0.59
MECP2-220ENST00000631210 COL18A1P39060 1754 aa11.39□□□□□ -0.59
MECP2-220ENST00000631210 COG3Q96JB2 828 aa11.39□□□□□ -0.59
MECP2-220ENST00000631210 PEAK1Q9H792 1746 aa11.39□□□□□ -0.59
MECP2-220ENST00000631210 PRKRIP1Q9H875 184 aaPredicted RBP11.39□□□□□ -0.59
MECP2-220ENST00000631210 AATKQ6ZMQ8 1374 aa11.39□□□□□ -0.59
MECP2-220ENST00000631210 MAP2P11137 1827 aaKnown RBP11.38□□□□□ -0.59
MECP2-220ENST00000631210 GCP02774 474 aa11.38□□□□□ -0.59
MECP2-220ENST00000631210 LMOD2Q6P5Q4 547 aa11.38□□□□□ -0.59
MECP2-220ENST00000631210 SMG6Q86US8 1419 aaKnown RBP11.37□□□□□ -0.59
MECP2-220ENST00000631210 DIEXFQ68CQ4 756 aaKnown RBP11.37□□□□□ -0.59
MECP2-220ENST00000631210 MORC1Q86VD1 984 aa11.37□□□□□ -0.59
MECP2-220ENST00000631210 POLKQ9UBT6 870 aa11.37□□□□□ -0.59
MECP2-220ENST00000631210 CPDO75976 1380 aa11.37□□□□□ -0.59
MECP2-220ENST00000631210 LTN1O94822 1766 aa11.36□□□□□ -0.59
MECP2-220ENST00000631210 PPP2R1AP30153 589 aa11.36□□□□□ -0.59
MECP2-220ENST00000631210 CNGB1Q14028 1251 aaPredicted RBP11.36□□□□□ -0.59
MECP2-220ENST00000631210 ARHGEF25Q86VW2 580 aa11.36□□□□□ -0.59
MECP2-220ENST00000631210 LMO7Q8WWI1 1683 aa11.36□□□□□ -0.59
MECP2-220ENST00000631210 MAP3K19Q56UN5 1328 aa11.35□□□□□ -0.59
MECP2-220ENST00000631210 PLEKHG5O94827 1062 aa11.35□□□□□ -0.59
MECP2-220ENST00000631210 RRS1Q15050 365 aaKnown RBP11.35□□□□□ -0.59
MECP2-220ENST00000631210 RALBP1Q15311 655 aa11.35□□□□□ -0.59
MECP2-220ENST00000631210 EMILIN1Q9Y6C2 1016 aa11.35□□□□□ -0.59
MECP2-220ENST00000631210 COL3A1P02461 1466 aaPredicted RBP11.35□□□□□ -0.59
MECP2-220ENST00000631210 SPATA31A6Q5VVP1 1343 aa11.35□□□□□ -0.59
MECP2-220ENST00000631210 KIAA0232Q92628 1395 aa11.34□□□□□ -0.59
MECP2-220ENST00000631210 TNNT2P45379 298 aaPredicted RBP11.34□□□□□ -0.59
MECP2-220ENST00000631210 ZC3H6P61129 1189 aaKnown RBP11.34□□□□□ -0.59
MECP2-220ENST00000631210 CCDC184Q52MB2 194 aa11.34□□□□□ -0.59
MECP2-220ENST00000631210 KCNH5Q8NCM2 988 aa11.34□□□□□ -0.59
MECP2-220ENST00000631210 RGPD5Q99666 1765 aa11.33□□□□□ -0.59
MECP2-220ENST00000631210 INSRP06213 1382 aa11.33□□□□□ -0.6
MECP2-220ENST00000631210 FAM83GA6ND36 823 aa11.33□□□□□ -0.6
MECP2-220ENST00000631210 SOX12O15370 315 aa11.33□□□□□ -0.6
MECP2-220ENST00000631210 AXIN2Q9Y2T1 843 aa11.33□□□□□ -0.6
MECP2-220ENST00000631210 CAMTA1Q9Y6Y1 1673 aa11.33□□□□□ -0.6
MECP2-220ENST00000631210 MTHFSP49914 203 aa11.32□□□□□ -0.6
MECP2-220ENST00000631210 CDK12Q9NYV4 1490 aaPredicted RBP11.32□□□□□ -0.6
MECP2-220ENST00000631210 KIF24Q5T7B8 1368 aa11.31□□□□□ -0.6
MECP2-220ENST00000631210 ABCC6O95255 1503 aa11.31□□□□□ -0.6
MECP2-220ENST00000631210 NUTM2BA6NNL0 878 aaPredicted RBP11.31□□□□□ -0.6
MECP2-220ENST00000631210 NUTM2EB1AL46 878 aaPredicted RBP11.31□□□□□ -0.6
MECP2-220ENST00000631210 HOXC9P31274 260 aa11.31□□□□□ -0.6
MECP2-220ENST00000631210 CHRNA2Q15822 529 aa11.31□□□□□ -0.6
MECP2-220ENST00000631210 NUTM2AQ8IVF1 878 aaPredicted RBP11.31□□□□□ -0.6
MECP2-220ENST00000631210 MIER1Q8N108 512 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms