RNA–Protein interactions for RNA: ENST00000630659.2

BBS1-225, Transcript of Bardet-Biedl syndrome 1, human

TSL 5 BASIC

Gene BBS1, Length 1,934 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-225	ENST00000630659	BRPF3	Q9ULD4	1205 aa		19.87	■□□□□ 0.77
BBS1-225	ENST00000630659	AMOTL2	Q9Y2J4	779 aa		19.87	■□□□□ 0.77
BBS1-225	ENST00000630659	NPM2	Q86SE8	214 aa	Known RBP	19.86	■□□□□ 0.77
BBS1-225	ENST00000630659	NUDT16	Q96DE0	195 aa	Known RBP	19.86	■□□□□ 0.77
BBS1-225	ENST00000630659	ADGRB2	O60241	1585 aa		19.86	■□□□□ 0.77
BBS1-225	ENST00000630659	SETD1B	Q9UPS6	1966 aa	Known RBP	19.85	■□□□□ 0.77
BBS1-225	ENST00000630659	PPIP5K1	Q6PFW1	1433 aa		19.85	■□□□□ 0.77
BBS1-225	ENST00000630659	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	19.85	■□□□□ 0.77
BBS1-225	ENST00000630659	FYB1	O15117	783 aa		19.85	■□□□□ 0.77
BBS1-225	ENST00000630659	ANKRD26	Q9UPS8	1709 aa		19.85	■□□□□ 0.77
BBS1-225	ENST00000630659	GGNBP2	Q9H3C7	697 aa		19.84	■□□□□ 0.77
BBS1-225	ENST00000630659	CCDC61	Q9Y6R9	512 aa		19.84	■□□□□ 0.77
BBS1-225	ENST00000630659	PTCH1	Q13635	1447 aa		19.83	■□□□□ 0.77
BBS1-225	ENST00000630659	MTHFS	P49914	203 aa		19.83	■□□□□ 0.77
BBS1-225	ENST00000630659	ANKLE2	Q86XL3	938 aa		19.83	■□□□□ 0.77
BBS1-225	ENST00000630659	CFAP53	Q96M91	514 aa		19.82	■□□□□ 0.76
BBS1-225	ENST00000630659	CPSF1	Q10570	1443 aa	Known RBP	19.82	■□□□□ 0.76
BBS1-225	ENST00000630659	PIK3R4	Q99570	1358 aa		19.82	■□□□□ 0.76
BBS1-225	ENST00000630659	RRP1	P56182	461 aa	Known RBP	19.82	■□□□□ 0.76
BBS1-225	ENST00000630659	KIF20B	Q96Q89	1820 aa		19.81	■□□□□ 0.76
BBS1-225	ENST00000630659	NFKBIB	Q15653	356 aa		19.81	■□□□□ 0.76
BBS1-225	ENST00000630659	PKNOX2	Q96KN3	472 aa		19.81	■□□□□ 0.76
BBS1-225	ENST00000630659	CDC42BPG	Q6DT37	1551 aa		19.81	■□□□□ 0.76
BBS1-225	ENST00000630659	XRN1	Q8IZH2	1706 aa	Known RBP	19.8	■□□□□ 0.76
BBS1-225	ENST00000630659	PRR36	Q9H6K5	1346 aa		19.8	■□□□□ 0.76
BBS1-225	ENST00000630659	SHPRH	Q149N8	1683 aa		19.79	■□□□□ 0.76
BBS1-225	ENST00000630659	EDC4	Q6P2E9	1401 aa	Known RBP	19.79	■□□□□ 0.76
BBS1-225	ENST00000630659	NCKAP5L	Q9HCH0	1330 aa		19.78	■□□□□ 0.76
BBS1-225	ENST00000630659	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	19.77	■□□□□ 0.76
BBS1-225	ENST00000630659	CCDC146	Q8IYE0	955 aa		19.77	■□□□□ 0.76
BBS1-225	ENST00000630659	DAXX	Q9UER7	740 aa	Predicted RBP	19.77	■□□□□ 0.76
BBS1-225	ENST00000630659	FRAT1	Q92837	279 aa	Predicted RBP	19.76	■□□□□ 0.75
BBS1-225	ENST00000630659	ZNF692	Q9BU19	519 aa	Predicted RBP	19.76	■□□□□ 0.75
BBS1-225	ENST00000630659	AKAP12	Q02952	1782 aa		19.75	■□□□□ 0.75
BBS1-225	ENST00000630659	MON2	Q7Z3U7	1717 aa		19.75	■□□□□ 0.75
BBS1-225	ENST00000630659	ITSN1	Q15811	1721 aa		19.75	■□□□□ 0.75
BBS1-225	ENST00000630659	CDCA7L	Q96GN5	454 aa		19.74	■□□□□ 0.75
BBS1-225	ENST00000630659	TOPAZ1	Q8N9V7	1692 aa		19.74	■□□□□ 0.75
BBS1-225	ENST00000630659	PLEKHG3	A1L390	1219 aa		19.74	■□□□□ 0.75
BBS1-225	ENST00000630659	KCNA6	P17658	529 aa		19.74	■□□□□ 0.75
BBS1-225	ENST00000630659	APAF1	O14727	1248 aa		19.73	■□□□□ 0.75
BBS1-225	ENST00000630659	NGEF	Q8N5V2	710 aa		19.73	■□□□□ 0.75
BBS1-225	ENST00000630659	ZNF521	Q96K83	1311 aa		19.73	■□□□□ 0.75
BBS1-225	ENST00000630659	NUTM2F	A1L443	756 aa		19.7	■□□□□ 0.74
BBS1-225	ENST00000630659	CHD2	O14647	1828 aa	Known RBP	19.7	■□□□□ 0.74
BBS1-225	ENST00000630659	NME9	Q86XW9	330 aa		19.7	■□□□□ 0.74
BBS1-225	ENST00000630659	RUNDC1	Q96C34	613 aa		19.7	■□□□□ 0.74
BBS1-225	ENST00000630659	COL3A1	P02461	1466 aa	Predicted RBP	19.7	■□□□□ 0.74
BBS1-225	ENST00000630659	ACE	P12821	1306 aa		19.69	■□□□□ 0.74
BBS1-225	ENST00000630659	RCAN3	Q9UKA8	241 aa		19.69	■□□□□ 0.74
BBS1-225	ENST00000630659	NPHP4	O75161	1426 aa	Predicted RBP	19.69	■□□□□ 0.74
BBS1-225	ENST00000630659	EXOC6	Q8TAG9	804 aa		19.68	■□□□□ 0.74
BBS1-225	ENST00000630659	GOLGA2	Q08379	1002 aa		19.68	■□□□□ 0.74
BBS1-225	ENST00000630659	NKTR	P30414	1462 aa	Known RBP	19.67	■□□□□ 0.74
BBS1-225	ENST00000630659	PNPLA6	Q8IY17	1366 aa		19.67	■□□□□ 0.74
BBS1-225	ENST00000630659	U2AF1L5	P0DN76	240 aa	Predicted RBP	19.66	■□□□□ 0.74
BBS1-225	ENST00000630659	U2AF1	Q01081	240 aa	Known RBP eCLIP	19.66	■□□□□ 0.74
BBS1-225	ENST00000630659	COG3	Q96JB2	828 aa		19.66	■□□□□ 0.74
BBS1-225	ENST00000630659	ZRANB1	Q9UGI0	708 aa		19.66	■□□□□ 0.74
BBS1-225	ENST00000630659	TTC21B	Q7Z4L5	1316 aa		19.66	■□□□□ 0.74
BBS1-225	ENST00000630659	POLK	Q9UBT6	870 aa		19.65	■□□□□ 0.74
BBS1-225	ENST00000630659	ANKAR	Q7Z5J8	1434 aa		19.65	■□□□□ 0.74
BBS1-225	ENST00000630659	NRK	Q7Z2Y5	1582 aa		19.65	■□□□□ 0.74
BBS1-225	ENST00000630659	AATK	Q6ZMQ8	1374 aa		19.65	■□□□□ 0.74
BBS1-225	ENST00000630659	USP6	P35125	1406 aa		19.65	■□□□□ 0.74
BBS1-225	ENST00000630659	DIAPH1	O60610	1272 aa	Known RBP	19.64	■□□□□ 0.73
BBS1-225	ENST00000630659	IQSEC2	Q5JU85	1478 aa		19.63	■□□□□ 0.73
BBS1-225	ENST00000630659	SLFN5	Q08AF3	891 aa		19.63	■□□□□ 0.73
BBS1-225	ENST00000630659	L1TD1	Q5T7N2	865 aa	Known RBP	19.63	■□□□□ 0.73
BBS1-225	ENST00000630659	U2SURP	O15042	1029 aa	Known RBP	19.63	■□□□□ 0.73
BBS1-225	ENST00000630659	DUSP27	Q5VZP5	1158 aa		19.63	■□□□□ 0.73
BBS1-225	ENST00000630659	TCP11L2	Q8N4U5	519 aa		19.63	■□□□□ 0.73
BBS1-225	ENST00000630659	MAP2	P11137	1827 aa	Known RBP	19.62	■□□□□ 0.73
BBS1-225	ENST00000630659	FMN2	Q9NZ56	1722 aa		19.62	■□□□□ 0.73
BBS1-225	ENST00000630659	RGPD8	O14715	1765 aa	Predicted RBP	19.62	■□□□□ 0.73
BBS1-225	ENST00000630659	FBLN1	P23142	703 aa		19.61	■□□□□ 0.73
BBS1-225	ENST00000630659	TRMT2A	Q8IZ69	625 aa	Known RBP	19.61	■□□□□ 0.73
BBS1-225	ENST00000630659	PMFBP1	Q8TBY8	1022 aa		19.61	■□□□□ 0.73
BBS1-225	ENST00000630659	NCBP3	Q53F19	620 aa	Known RBP	19.61	■□□□□ 0.73
BBS1-225	ENST00000630659	SSH2	Q76I76	1423 aa		19.6	■□□□□ 0.73
BBS1-225	ENST00000630659	WWC1	Q8IX03	1113 aa		19.6	■□□□□ 0.73
BBS1-225	ENST00000630659	NGDN	Q8NEJ9	315 aa	Known RBP	19.6	■□□□□ 0.73
BBS1-225	ENST00000630659		E9PSI1	815 aa		19.59	■□□□□ 0.73
BBS1-225	ENST00000630659	NALCN	Q8IZF0	1738 aa		19.59	■□□□□ 0.73
BBS1-225	ENST00000630659	TTC21A	Q8NDW8	1320 aa		19.59	■□□□□ 0.73
BBS1-225	ENST00000630659	EMILIN1	Q9Y6C2	1016 aa		19.59	■□□□□ 0.73
BBS1-225	ENST00000630659	PHF23	Q9BUL5	403 aa	Predicted RBP	19.58	■□□□□ 0.72
BBS1-225	ENST00000630659	CDK12	Q9NYV4	1490 aa	Predicted RBP	19.57	■□□□□ 0.72
BBS1-225	ENST00000630659	CCDC27	Q2M243	656 aa		19.57	■□□□□ 0.72
BBS1-225	ENST00000630659	PLEKHF1	Q96S99	279 aa		19.57	■□□□□ 0.72
BBS1-225	ENST00000630659	PNN	Q9H307	717 aa	Known RBP	19.57	■□□□□ 0.72
BBS1-225	ENST00000630659	RRP7A	Q9Y3A4	280 aa	Known RBP	19.57	■□□□□ 0.72
BBS1-225	ENST00000630659	OVOS2	A0A0J9YW53	1432 aa		19.57	■□□□□ 0.72
BBS1-225	ENST00000630659	OVOS2	Q6IE36	1432 aa		19.57	■□□□□ 0.72
BBS1-225	ENST00000630659	RRP9	O43818	475 aa	Known RBP	19.57	■□□□□ 0.72
BBS1-225	ENST00000630659	NEUROD2	Q15784	382 aa		19.57	■□□□□ 0.72
BBS1-225	ENST00000630659	SPINK5	Q9NQ38	1064 aa	Predicted RBP	19.57	■□□□□ 0.72
BBS1-225	ENST00000630659	ADGRL3	Q9HAR2	1447 aa		19.56	■□□□□ 0.72
BBS1-225	ENST00000630659	FAM161A	Q3B820	660 aa		19.56	■□□□□ 0.72
BBS1-225	ENST00000630659	DMRT2	Q9Y5R5	561 aa		19.55	■□□□□ 0.72

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms