RNA–Protein interactions for RNA: ENST00000628742.2

SOX9-AS1-218, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 733 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-218ENST00000628742 REM2Q8IYK8 340 aaPredicted RBP10.24□□□□□ -0.77
SOX9-AS1-218ENST00000628742 ITGAEP38570 1179 aa10.23□□□□□ -0.77
SOX9-AS1-218ENST00000628742 XPCQ01831 940 aaPredicted RBP10.23□□□□□ -0.77
SOX9-AS1-218ENST00000628742 KRT28Q7Z3Y7 464 aa10.23□□□□□ -0.77
SOX9-AS1-218ENST00000628742 DEFB132Q7Z7B7 95 aa10.23□□□□□ -0.77
SOX9-AS1-218ENST00000628742 ZNF692Q9BU19 519 aaPredicted RBP10.23□□□□□ -0.77
SOX9-AS1-218ENST00000628742 SSUH2Q9Y2M2 353 aa10.23□□□□□ -0.77
SOX9-AS1-218ENST00000628742 TNS1Q9HBL0 1735 aaKnown RBP10.22□□□□□ -0.77
SOX9-AS1-218ENST00000628742 RGPD8O14715 1765 aaPredicted RBP10.22□□□□□ -0.77
SOX9-AS1-218ENST00000628742 COL14A1Q05707 1796 aaKnown RBP10.22□□□□□ -0.77
SOX9-AS1-218ENST00000628742 HRCP23327 699 aa10.22□□□□□ -0.77
SOX9-AS1-218ENST00000628742 KRT27Q7Z3Y8 459 aa10.22□□□□□ -0.77
SOX9-AS1-218ENST00000628742 PHF8Q9UPP1 1060 aa10.22□□□□□ -0.77
SOX9-AS1-218ENST00000628742 RGPD1P0DJD0 1748 aa10.21□□□□□ -0.77
SOX9-AS1-218ENST00000628742 UTRNP46939 3433 aa10.21□□□□□ -0.77
SOX9-AS1-218ENST00000628742 FAM83GA6ND36 823 aa10.21□□□□□ -0.77
SOX9-AS1-218ENST00000628742 PSME1Q06323 249 aa10.21□□□□□ -0.77
SOX9-AS1-218ENST00000628742 PARD3Q8TEW0 1356 aa10.2□□□□□ -0.78
SOX9-AS1-218ENST00000628742 SPATA31A5Q5VU36 1347 aa10.19□□□□□ -0.78
SOX9-AS1-218ENST00000628742 SPATA31A7Q8IWB4 1347 aa10.19□□□□□ -0.78
SOX9-AS1-218ENST00000628742 ACIN1Q9UKV3 1341 aaKnown RBP10.19□□□□□ -0.78
SOX9-AS1-218ENST00000628742 TMEM132EQ6IEE7 984 aa10.19□□□□□ -0.78
SOX9-AS1-218ENST00000628742 CHRDL2Q6WN34 429 aa10.19□□□□□ -0.78
SOX9-AS1-218ENST00000628742 TULP4Q9NRJ4 1543 aa10.18□□□□□ -0.78
SOX9-AS1-218ENST00000628742 DHX57Q6P158 1386 aaKnown RBP10.17□□□□□ -0.78
SOX9-AS1-218ENST00000628742 BAG6P46379 1132 aa10.17□□□□□ -0.78
SOX9-AS1-218ENST00000628742 CABLES1Q8TDN4 633 aa10.17□□□□□ -0.78
SOX9-AS1-218ENST00000628742 MPHOSPH9Q99550 1183 aa10.17□□□□□ -0.78
SOX9-AS1-218ENST00000628742 STK26Q9P289 416 aa10.17□□□□□ -0.78
SOX9-AS1-218ENST00000628742 RREB1Q92766 1687 aa10.17□□□□□ -0.78
SOX9-AS1-218ENST00000628742 EIF3AQ14152 1382 aaKnown RBP10.16□□□□□ -0.78
SOX9-AS1-218ENST00000628742 PRR36Q9H6K5 1346 aa10.16□□□□□ -0.78
SOX9-AS1-218ENST00000628742 NUTM2FA1L443 756 aa10.16□□□□□ -0.78
SOX9-AS1-218ENST00000628742 SF3B2Q13435 895 aaKnown RBP10.16□□□□□ -0.78
SOX9-AS1-218ENST00000628742 CAMKK2Q96RR4 588 aa10.16□□□□□ -0.78
SOX9-AS1-218ENST00000628742 ATP7BP35670 1465 aa10.15□□□□□ -0.78
SOX9-AS1-218ENST00000628742 PITPNM1O00562 1244 aa10.14□□□□□ -0.79
SOX9-AS1-218ENST00000628742 CFAP70Q5T0N1 1121 aa10.14□□□□□ -0.79
SOX9-AS1-218ENST00000628742 PRAM1Q96QH2 718 aa10.14□□□□□ -0.79
SOX9-AS1-218ENST00000628742 BTG4Q9NY30 223 aa10.14□□□□□ -0.79
SOX9-AS1-218ENST00000628742 POLR3AO14802 1390 aaPredicted RBP10.14□□□□□ -0.79
SOX9-AS1-218ENST00000628742 SPATA31A1Q5TZJ5 1347 aa10.13□□□□□ -0.79
SOX9-AS1-218ENST00000628742 LMO7Q8WWI1 1683 aa10.13□□□□□ -0.79
SOX9-AS1-218ENST00000628742 FAM98CQ17RN3 349 aaKnown RBP10.13□□□□□ -0.79
SOX9-AS1-218ENST00000628742 RGL3Q3MIN7 710 aa10.13□□□□□ -0.79
SOX9-AS1-218ENST00000628742 STAC3Q96MF2 364 aa10.13□□□□□ -0.79
SOX9-AS1-218ENST00000628742 RGPD3A6NKT7 1758 aaPredicted RBP10.13□□□□□ -0.79
SOX9-AS1-218ENST00000628742 RGPD4Q7Z3J3 1758 aa10.13□□□□□ -0.79
SOX9-AS1-218ENST00000628742 PHRF1Q9P1Y6 1649 aaKnown RBP10.12□□□□□ -0.79
SOX9-AS1-218ENST00000628742 EN1Q05925 392 aaPredicted RBP10.12□□□□□ -0.79
SOX9-AS1-218ENST00000628742 BARGINQ6ZT62 677 aa10.12□□□□□ -0.79
SOX9-AS1-218ENST00000628742 NUP188Q5SRE5 1749 aa10.12□□□□□ -0.79
SOX9-AS1-218ENST00000628742 CPDO75976 1380 aa10.12□□□□□ -0.79
SOX9-AS1-218ENST00000628742 TOPAZ1Q8N9V7 1692 aa10.12□□□□□ -0.79
SOX9-AS1-218ENST00000628742 GPRASP1Q5JY77 1395 aa10.11□□□□□ -0.79
SOX9-AS1-218ENST00000628742 ITSN1Q15811 1721 aa10.1□□□□□ -0.79
SOX9-AS1-218ENST00000628742 PEAK1Q9H792 1746 aa10.1□□□□□ -0.79
SOX9-AS1-218ENST00000628742 PSDA5PKW4 1024 aaPredicted RBP10.1□□□□□ -0.79
SOX9-AS1-218ENST00000628742 SPDYE4A6NLX3 237 aa10.1□□□□□ -0.79
SOX9-AS1-218ENST00000628742 WASLO00401 505 aaPredicted RBP10.1□□□□□ -0.79
SOX9-AS1-218ENST00000628742 FAM196AQ6ZSG2 479 aa10.1□□□□□ -0.79
SOX9-AS1-218ENST00000628742 PARP4Q9UKK3 1724 aaKnown RBP10.1□□□□□ -0.79
SOX9-AS1-218ENST00000628742 NRKQ7Z2Y5 1582 aa10.09□□□□□ -0.79
SOX9-AS1-218ENST00000628742 USP19O94966 1318 aa10.09□□□□□ -0.79
SOX9-AS1-218ENST00000628742 BCL9O00512 1426 aa10.09□□□□□ -0.79
SOX9-AS1-218ENST00000628742 R3HDM1Q15032 1099 aaKnown RBP10.09□□□□□ -0.79
SOX9-AS1-218ENST00000628742 PPARGC1BQ86YN6 1023 aaKnown RBP10.09□□□□□ -0.79
SOX9-AS1-218ENST00000628742 ARHGEF28Q8N1W1 1705 aaKnown RBP10.09□□□□□ -0.79
SOX9-AS1-218ENST00000628742 KIAA0232Q92628 1395 aa10.09□□□□□ -0.79
SOX9-AS1-218ENST00000628742 CAMTA1Q9Y6Y1 1673 aa10.09□□□□□ -0.79
SOX9-AS1-218ENST00000628742 SSH2Q76I76 1423 aa10.08□□□□□ -0.8
SOX9-AS1-218ENST00000628742 HAP1P54257 671 aaPredicted RBP10.08□□□□□ -0.8
SOX9-AS1-218ENST00000628742 SPDYE1Q8NFV5 336 aaPredicted RBP10.08□□□□□ -0.8
SOX9-AS1-218ENST00000628742 PMFBP1Q8TBY8 1022 aa10.08□□□□□ -0.8
SOX9-AS1-218ENST00000628742 GOLGB1Q14789 3259 aaKnown RBP10.08□□□□□ -0.8
SOX9-AS1-218ENST00000628742 BRD4O60885 1362 aaPredicted RBP10.07□□□□□ -0.8
SOX9-AS1-218ENST00000628742 NINLQ9Y2I6 1382 aa10.07□□□□□ -0.8
SOX9-AS1-218ENST00000628742 EZH2Q15910 746 aaKnown RBP10.07□□□□□ -0.8
SOX9-AS1-218ENST00000628742 PLEKHG3A1L390 1219 aa10.06□□□□□ -0.8
SOX9-AS1-218ENST00000628742 C11orf95C9JLR9 678 aaPredicted RBP10.06□□□□□ -0.8
SOX9-AS1-218ENST00000628742 PRDM11Q9NQV5 511 aa10.06□□□□□ -0.8
SOX9-AS1-218ENST00000628742 CCDC9Q9Y3X0 531 aaKnown RBP10.06□□□□□ -0.8
SOX9-AS1-218ENST00000628742 CEP350Q5VT06 3117 aa10.06□□□□□ -0.8
SOX9-AS1-218ENST00000628742 CASZ1Q86V15 1759 aa10.06□□□□□ -0.8
SOX9-AS1-218ENST00000628742 FAM182BQ5T319 152 aa10.05□□□□□ -0.8
SOX9-AS1-218ENST00000628742 POGKQ9P215 609 aa10.05□□□□□ -0.8
SOX9-AS1-218ENST00000628742 THRAP3Q9Y2W1 955 aaKnown RBP10.05□□□□□ -0.8
SOX9-AS1-218ENST00000628742 KIAA1210Q9ULL0 1709 aa10.04□□□□□ -0.8
SOX9-AS1-218ENST00000628742 COL5A2P05997 1499 aaPredicted RBP10.04□□□□□ -0.8
SOX9-AS1-218ENST00000628742 AATKQ6ZMQ8 1374 aa10.03□□□□□ -0.8
SOX9-AS1-218ENST00000628742 SLIT3O75094 1523 aa10.03□□□□□ -0.8
SOX9-AS1-218ENST00000628742 PLSCR1O15162 318 aa10.03□□□□□ -0.8
SOX9-AS1-218ENST00000628742 TRIM37O94972 964 aa10.03□□□□□ -0.8
SOX9-AS1-218ENST00000628742 SAFB2Q14151 953 aaKnown RBP eCLIP10.03□□□□□ -0.8
SOX9-AS1-218ENST00000628742 LMOD2Q6P5Q4 547 aa10.03□□□□□ -0.8
SOX9-AS1-218ENST00000628742 NUDT16Q96DE0 195 aaKnown RBP10.03□□□□□ -0.8
SOX9-AS1-218ENST00000628742 CLEC11AQ9Y240 323 aa10.03□□□□□ -0.8
SOX9-AS1-218ENST00000628742 TCP11L2Q8N4U5 519 aa10.02□□□□□ -0.81
SOX9-AS1-218ENST00000628742 HIRIP3Q9BW71 556 aaPredicted RBP10.02□□□□□ -0.81
SOX9-AS1-218ENST00000628742 TRAK1Q9UPV9 953 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms