RNA–Protein interactions for RNA: ENST00000628176.2

MECP2-217, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3 BASIC

Gene MECP2, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-217ENST00000628176 PPP4R2Q9NY27 417 aa19.07■□□□□ 0.64
MECP2-217ENST00000628176 KTN1Q86UP2 1357 aaKnown RBP19.07■□□□□ 0.64
MECP2-217ENST00000628176 NINLQ9Y2I6 1382 aa19.06■□□□□ 0.64
MECP2-217ENST00000628176 AKAP12Q02952 1782 aa19.05■□□□□ 0.64
MECP2-217ENST00000628176 CPSF1Q10570 1443 aaKnown RBP19.03■□□□□ 0.64
MECP2-217ENST00000628176 SMG6Q86US8 1419 aaKnown RBP19.03■□□□□ 0.64
MECP2-217ENST00000628176 POLR3AO14802 1390 aaPredicted RBP19.03■□□□□ 0.64
MECP2-217ENST00000628176 PSME1Q06323 249 aa19.03■□□□□ 0.64
MECP2-217ENST00000628176 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.03■□□□□ 0.645e-7■■■■□ 20.4
MECP2-217ENST00000628176 HDGFL2Q7Z4V5 671 aaPredicted RBP19.03■□□□□ 0.64
MECP2-217ENST00000628176 ANKRD36BQ8N2N9 1353 aa19.02■□□□□ 0.64
MECP2-217ENST00000628176 TERF2IPQ9NYB0 399 aa19.02■□□□□ 0.63
MECP2-217ENST00000628176 KIF1AQ12756 1690 aa19.02■□□□□ 0.63
MECP2-217ENST00000628176 PLEKHG5O94827 1062 aa19.01■□□□□ 0.63
MECP2-217ENST00000628176 KRT28Q7Z3Y7 464 aa19.01■□□□□ 0.63
MECP2-217ENST00000628176 FANCIQ9NVI1 1328 aa19■□□□□ 0.63
MECP2-217ENST00000628176 PAK3O75914 559 aaPredicted RBP19■□□□□ 0.63
MECP2-217ENST00000628176 ZRANB1Q9UGI0 708 aa19■□□□□ 0.63
MECP2-217ENST00000628176 MON2Q7Z3U7 1717 aa19■□□□□ 0.63
MECP2-217ENST00000628176 NSD3Q9BZ95 1437 aa19■□□□□ 0.63
MECP2-217ENST00000628176 NUTM2GQ5VZR2 741 aa19■□□□□ 0.63
MECP2-217ENST00000628176 USP6P35125 1406 aa18.99■□□□□ 0.63
MECP2-217ENST00000628176 FAM9BQ8IZU0 186 aa18.99■□□□□ 0.63
MECP2-217ENST00000628176 NHSL1Q5SYE7 1610 aa18.98■□□□□ 0.63
MECP2-217ENST00000628176 PER1O15534 1290 aaPredicted RBP18.98■□□□□ 0.63
MECP2-217ENST00000628176 RNF123Q5XPI4 1314 aa18.98■□□□□ 0.63
MECP2-217ENST00000628176 PXDNQ92626 1479 aa18.98■□□□□ 0.63
MECP2-217ENST00000628176 LMOD2Q6P5Q4 547 aa18.97■□□□□ 0.63
MECP2-217ENST00000628176 NME9Q86XW9 330 aa18.97■□□□□ 0.63
MECP2-217ENST00000628176 ZNF692Q9BU19 519 aaPredicted RBP18.97■□□□□ 0.63
MECP2-217ENST00000628176 NPHP3Q7Z494 1330 aa18.97■□□□□ 0.63
MECP2-217ENST00000628176 TTC21BQ7Z4L5 1316 aa18.97■□□□□ 0.63
MECP2-217ENST00000628176 TRPM3Q9HCF6 1732 aaPredicted RBP18.96■□□□□ 0.63
MECP2-217ENST00000628176 SSH2Q76I76 1423 aa18.96■□□□□ 0.63
MECP2-217ENST00000628176 NRKQ7Z2Y5 1582 aa18.96■□□□□ 0.63
MECP2-217ENST00000628176 SOS2Q07890 1332 aaPredicted RBP18.95■□□□□ 0.62
MECP2-217ENST00000628176 PHLPP1O60346 1717 aa18.95■□□□□ 0.62
MECP2-217ENST00000628176 GGNBP2Q9H3C7 697 aa18.94■□□□□ 0.62
MECP2-217ENST00000628176 KNSTRNQ9Y448 316 aa18.94■□□□□ 0.62
MECP2-217ENST00000628176 CC2D1BQ5T0F9 858 aaKnown RBP18.94■□□□□ 0.62
MECP2-217ENST00000628176 EDC4Q6P2E9 1401 aaKnown RBP18.93■□□□□ 0.62
MECP2-217ENST00000628176 HSPA1LP34931 641 aa18.93■□□□□ 0.62
MECP2-217ENST00000628176 AHDC1Q5TGY3 1603 aaPredicted RBP18.92■□□□□ 0.62
MECP2-217ENST00000628176 BRD4O60885 1362 aaPredicted RBP18.92■□□□□ 0.62
MECP2-217ENST00000628176 FYB1O15117 783 aa18.92■□□□□ 0.62
MECP2-217ENST00000628176 PIK3C2AO00443 1686 aa18.92■□□□□ 0.62
MECP2-217ENST00000628176 RALBP1Q15311 655 aa18.91■□□□□ 0.62
MECP2-217ENST00000628176 AMER1Q5JTC6 1135 aaPredicted RBP18.91■□□□□ 0.62
MECP2-217ENST00000628176 ABTB2Q8N961 1025 aa18.91■□□□□ 0.62
MECP2-217ENST00000628176 FBLN1P23142 703 aa18.91■□□□□ 0.62
MECP2-217ENST00000628176 PNISRQ8TF01 805 aaKnown RBP18.91■□□□□ 0.62
MECP2-217ENST00000628176 NUDCQ9Y266 331 aa18.91■□□□□ 0.62
MECP2-217ENST00000628176 COL16A1Q07092 1604 aaPredicted RBP18.9■□□□□ 0.62
MECP2-217ENST00000628176 SPATA31A3Q5VYP0 1347 aa18.9■□□□□ 0.62
MECP2-217ENST00000628176 KIF20BQ96Q89 1820 aa18.89■□□□□ 0.62
MECP2-217ENST00000628176 ALS2Q96Q42 1657 aa18.89■□□□□ 0.61
MECP2-217ENST00000628176 SOX12O15370 315 aa18.89■□□□□ 0.61
MECP2-217ENST00000628176 CABLES1Q8TDN4 633 aa18.89■□□□□ 0.61
MECP2-217ENST00000628176 NLRP6P59044 892 aa18.88■□□□□ 0.61
MECP2-217ENST00000628176 CGNL1Q0VF96 1302 aa18.88■□□□□ 0.61
MECP2-217ENST00000628176 INSRP06213 1382 aa18.88■□□□□ 0.61
MECP2-217ENST00000628176 TNS3Q68CZ2 1445 aa18.88■□□□□ 0.61
MECP2-217ENST00000628176 TNNT2P45379 298 aaPredicted RBP18.88■□□□□ 0.61
MECP2-217ENST00000628176 MARF1Q9Y4F3 1742 aaKnown RBP18.88■□□□□ 0.61
MECP2-217ENST00000628176 SBNO1A3KN83 1393 aa18.87■□□□□ 0.61
MECP2-217ENST00000628176 TTC21AQ8NDW8 1320 aa18.86■□□□□ 0.61
MECP2-217ENST00000628176 NPC1L1Q9UHC9 1359 aa18.86■□□□□ 0.61
MECP2-217ENST00000628176 IRX6P78412 446 aaPredicted RBP18.86■□□□□ 0.61
MECP2-217ENST00000628176 MYBBP1AQ9BQG0 1328 aaKnown RBP18.85■□□□□ 0.61
MECP2-217ENST00000628176 LRRC59Q96AG4 307 aaKnown RBP18.85■□□□□ 0.61
MECP2-217ENST00000628176 COG3Q96JB2 828 aa18.83■□□□□ 0.6
MECP2-217ENST00000628176 MED1Q15648 1581 aaPredicted RBP18.82■□□□□ 0.6
MECP2-217ENST00000628176 MORC1Q86VD1 984 aa18.82■□□□□ 0.6
MECP2-217ENST00000628176 OVOS2A0A0J9YW53 1432 aa18.81■□□□□ 0.6
MECP2-217ENST00000628176 OVOS2Q6IE36 1432 aa18.81■□□□□ 0.6
MECP2-217ENST00000628176 NSD2O96028 1365 aa18.81■□□□□ 0.6
MECP2-217ENST00000628176 PNPLA6Q8IY17 1366 aa18.81■□□□□ 0.6
MECP2-217ENST00000628176 PARD3Q8TEW0 1356 aa18.81■□□□□ 0.6
MECP2-217ENST00000628176 ANKRD26Q9UPS8 1709 aa18.8■□□□□ 0.6
MECP2-217ENST00000628176 NLRP13Q86W25 1043 aa18.8■□□□□ 0.6
MECP2-217ENST00000628176 USP31Q70CQ4 1352 aa18.8■□□□□ 0.6
MECP2-217ENST00000628176 ARHGEF10O15013 1369 aa18.79■□□□□ 0.6
MECP2-217ENST00000628176 NUTM2BA6NNL0 878 aaPredicted RBP18.79■□□□□ 0.6
MECP2-217ENST00000628176 NUTM2EB1AL46 878 aaPredicted RBP18.79■□□□□ 0.6
MECP2-217ENST00000628176 NUTM2AQ8IVF1 878 aaPredicted RBP18.79■□□□□ 0.6
MECP2-217ENST00000628176 CRYBG1Q9Y4K1 1723 aa18.78■□□□□ 0.6
MECP2-217ENST00000628176 ZBTB7CA1YPR0 619 aa18.78■□□□□ 0.6
MECP2-217ENST00000628176 RRS1Q15050 365 aaKnown RBP18.78■□□□□ 0.6
MECP2-217ENST00000628176 GCP02774 474 aa18.77■□□□□ 0.6
MECP2-217ENST00000628176 ZC3H6P61129 1189 aaKnown RBP18.77■□□□□ 0.6
MECP2-217ENST00000628176 MAP2P11137 1827 aaKnown RBP18.77■□□□□ 0.6
MECP2-217ENST00000628176 USP19O94966 1318 aa18.77■□□□□ 0.6
MECP2-217ENST00000628176 PHRF1Q9P1Y6 1649 aaKnown RBP18.76■□□□□ 0.59
MECP2-217ENST00000628176 ABCA3Q99758 1704 aa18.76■□□□□ 0.59
MECP2-217ENST00000628176 MSH5O43196 834 aa18.76■□□□□ 0.59
MECP2-217ENST00000628176 PDE3BQ13370 1112 aa18.76■□□□□ 0.59
MECP2-217ENST00000628176 USP54Q70EL1 1684 aa18.76■□□□□ 0.59
MECP2-217ENST00000628176 JCADQ9P266 1359 aa18.75■□□□□ 0.59
MECP2-217ENST00000628176 B4GALNT3Q6L9W6 998 aa18.74■□□□□ 0.59
MECP2-217ENST00000628176 EMILIN1Q9Y6C2 1016 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms