RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 MMP16P51512 607 aa7.86□□□□□ -1.15
CDR1-202ENST00000625883 TJAP1Q5JTD0 557 aa7.86□□□□□ -1.15
CDR1-202ENST00000625883 CALR3Q96L12 384 aaKnown RBP7.85□□□□□ -1.15
CDR1-202ENST00000625883 ADH1BP00325 375 aa7.84□□□□□ -1.15
CDR1-202ENST00000625883 ZNF516Q92618 1163 aa7.84□□□□□ -1.15
CDR1-202ENST00000625883 GGCXP38435 758 aa7.83□□□□□ -1.16
CDR1-202ENST00000625883 CCNYL3P0C7X3 344 aa7.82□□□□□ -1.16
CDR1-202ENST00000625883 HDGFL1Q5TGJ6 251 aa7.82□□□□□ -1.16
CDR1-202ENST00000625883 NUDT12Q9BQG2 462 aa7.82□□□□□ -1.16
CDR1-202ENST00000625883 ALG2Q9H553 416 aa7.82□□□□□ -1.16
CDR1-202ENST00000625883 FKBPLQ9UIM3 349 aa7.82□□□□□ -1.16
CDR1-202ENST00000625883 EVA1BQ9NVM1 165 aa7.81□□□□□ -1.16
CDR1-202ENST00000625883 CTHP32929 405 aa7.81□□□□□ -1.16
CDR1-202ENST00000625883 KCNH2Q12809 1159 aa7.81□□□□□ -1.16
CDR1-202ENST00000625883 FBXO45P0C2W1 286 aa7.8□□□□□ -1.16
CDR1-202ENST00000625883 PNMA1Q8ND90 353 aa7.8□□□□□ -1.16
CDR1-202ENST00000625883 ZC3H4Q9UPT8 1303 aaKnown RBP7.79□□□□□ -1.16
CDR1-202ENST00000625883 NR1H3Q13133 447 aa7.79□□□□□ -1.16
CDR1-202ENST00000625883 A0A0G2JS52 829 aa7.78□□□□□ -1.16
CDR1-202ENST00000625883 ZBBXA8MT70 800 aa7.78□□□□□ -1.16
CDR1-202ENST00000625883 SOX11P35716 441 aa7.78□□□□□ -1.16
CDR1-202ENST00000625883 NKX2-3Q8TAU0 364 aa7.78□□□□□ -1.16
CDR1-202ENST00000625883 UCN2Q96RP3 112 aa7.78□□□□□ -1.16
CDR1-202ENST00000625883 SLC6A16Q9GZN6 736 aa7.78□□□□□ -1.16
CDR1-202ENST00000625883 RGS20O76081 388 aa7.77□□□□□ -1.17
CDR1-202ENST00000625883 PTCRAQ6ISU1 281 aaPredicted RBP7.77□□□□□ -1.17
CDR1-202ENST00000625883 CFAP70Q5T0N1 1121 aa7.76□□□□□ -1.17
CDR1-202ENST00000625883 OCSTAMPQ9BR26 566 aa7.76□□□□□ -1.17
CDR1-202ENST00000625883 S1PR4O95977 384 aa7.75□□□□□ -1.17
CDR1-202ENST00000625883 EIF4G2P78344 907 aaKnown RBP eCLIP7.75□□□□□ -1.17
CDR1-202ENST00000625883 PPP1R12CQ9BZL4 782 aa7.75□□□□□ -1.17
CDR1-202ENST00000625883 UNC93B1Q9H1C4 597 aa7.75□□□□□ -1.17
CDR1-202ENST00000625883 SEMA3FQ13275 785 aa7.75□□□□□ -1.17
CDR1-202ENST00000625883 PDXDC2PQ6P474 469 aa7.75□□□□□ -1.17
CDR1-202ENST00000625883 CCDC24Q8N4L8 307 aa7.75□□□□□ -1.17
CDR1-202ENST00000625883 ARMC2Q8NEN0 867 aa7.75□□□□□ -1.17
CDR1-202ENST00000625883 GPKOWQ92917 476 aaPredicted RBP eCLIP7.75□□□□□ -1.17
CDR1-202ENST00000625883 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.74□□□□□ -1.17
CDR1-202ENST00000625883 GPSM3Q9Y4H4 160 aa7.74□□□□□ -1.17
CDR1-202ENST00000625883 PALM3A6NDB9 673 aaPredicted RBP7.73□□□□□ -1.17
CDR1-202ENST00000625883 NBPF14Q5TI25 921 aa7.73□□□□□ -1.17
CDR1-202ENST00000625883 SRPK2P78362 688 aaKnown RBP7.72□□□□□ -1.17
CDR1-202ENST00000625883 PTK2Q05397 1052 aa7.72□□□□□ -1.17
CDR1-202ENST00000625883 FCF1Q9Y324 198 aaKnown RBP7.72□□□□□ -1.17
CDR1-202ENST00000625883 PPP1R15AO75807 674 aaPredicted RBP7.71□□□□□ -1.18
CDR1-202ENST00000625883 RFX1P22670 979 aa7.71□□□□□ -1.18
CDR1-202ENST00000625883 PPP1R18Q6NYC8 613 aa7.71□□□□□ -1.18
CDR1-202ENST00000625883 TBC1D9Q6ZT07 1266 aa7.71□□□□□ -1.18
CDR1-202ENST00000625883 SH3BP5LQ7L8J4 393 aa7.71□□□□□ -1.18
CDR1-202ENST00000625883 TFIP11Q9UBB9 837 aaKnown RBP7.71□□□□□ -1.18
CDR1-202ENST00000625883 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.7□□□□□ -1.18
CDR1-202ENST00000625883 PIK3CDO00329 1044 aa7.7□□□□□ -1.18
CDR1-202ENST00000625883 SH3RF1Q7Z6J0 888 aa7.69□□□□□ -1.18
CDR1-202ENST00000625883 ANKLE1Q8NAG6 615 aa7.69□□□□□ -1.18
CDR1-202ENST00000625883 ADAM32Q8TC27 787 aa7.69□□□□□ -1.18
CDR1-202ENST00000625883 PBXIP1Q96AQ6 731 aa7.69□□□□□ -1.18
CDR1-202ENST00000625883 MAFBQ9Y5Q3 323 aaPredicted RBP7.69□□□□□ -1.18
CDR1-202ENST00000625883 PPEF1O14829 653 aaPredicted RBP7.68□□□□□ -1.18
CDR1-202ENST00000625883 RETREG2Q8NC44 543 aa7.68□□□□□ -1.18
CDR1-202ENST00000625883 BAP1Q92560 729 aa7.68□□□□□ -1.18
CDR1-202ENST00000625883 ARHGAP9Q9BRR9 750 aa7.68□□□□□ -1.18
CDR1-202ENST00000625883 ATP9BO43861 1147 aa7.68□□□□□ -1.18
CDR1-202ENST00000625883 LMOD1P29536 600 aaPredicted RBP7.68□□□□□ -1.18
CDR1-202ENST00000625883 LINC01559Q495D7 138 aa7.68□□□□□ -1.18
CDR1-202ENST00000625883 FAM174AQ8TBP5 190 aa7.68□□□□□ -1.18
CDR1-202ENST00000625883 RNF223E7ERA6 249 aa7.67□□□□□ -1.18
CDR1-202ENST00000625883 C4orf48Q5BLP8 95 aa7.67□□□□□ -1.18
CDR1-202ENST00000625883 ZNF511Q8NB15 262 aa7.67□□□□□ -1.18
CDR1-202ENST00000625883 FOXJ1Q92949 421 aa7.67□□□□□ -1.18
CDR1-202ENST00000625883 CEP126Q9P2H0 1117 aa7.67□□□□□ -1.18
CDR1-202ENST00000625883 PCDHB9Q9Y5E1 797 aa7.67□□□□□ -1.18
CDR1-202ENST00000625883 PDIA4P13667 645 aaKnown RBP7.66□□□□□ -1.18
CDR1-202ENST00000625883 PLA2G2CQ5R387 149 aa7.66□□□□□ -1.18
CDR1-202ENST00000625883 NFATC2IPQ8NCF5 419 aa7.66□□□□□ -1.18
CDR1-202ENST00000625883 CARD14Q9BXL6 1004 aa7.66□□□□□ -1.18
CDR1-202ENST00000625883 MAGEB6P1A0A0J9YX57 407 aa7.65□□□□□ -1.18
CDR1-202ENST00000625883 ZBTB33Q86T24 672 aa7.65□□□□□ -1.18
CDR1-202ENST00000625883 PHTF2Q8N3S3 785 aa7.65□□□□□ -1.18
CDR1-202ENST00000625883 V9GY48 417 aaPredicted RBP7.65□□□□□ -1.18
CDR1-202ENST00000625883 MCCD1P59942 119 aaPredicted RBP7.64□□□□□ -1.19
CDR1-202ENST00000625883 ERFEQ4G0M1 354 aa7.64□□□□□ -1.19
CDR1-202ENST00000625883 BPHLQ86WA6 291 aaPredicted RBP7.64□□□□□ -1.19
CDR1-202ENST00000625883 ZNF592Q92610 1267 aa7.64□□□□□ -1.19
CDR1-202ENST00000625883 TRAIPQ9BWF2 469 aa7.64□□□□□ -1.19
CDR1-202ENST00000625883 ZBTB24O43167 697 aaPredicted RBP7.63□□□□□ -1.19
CDR1-202ENST00000625883 SKIP12755 728 aa7.63□□□□□ -1.19
CDR1-202ENST00000625883 SH3BP2P78314 561 aa7.63□□□□□ -1.19
CDR1-202ENST00000625883 C1QTNF2Q9BXJ5 285 aa7.63□□□□□ -1.19
CDR1-202ENST00000625883 ACIN1Q9UKV3 1341 aaKnown RBP7.63□□□□□ -1.19
CDR1-202ENST00000625883 USP17L3A6NCW0 530 aa7.62□□□□□ -1.19
CDR1-202ENST00000625883 USP17L4A6NCW7 530 aa7.62□□□□□ -1.19
CDR1-202ENST00000625883 USP17L5A8MUK1 530 aa7.62□□□□□ -1.19
CDR1-202ENST00000625883 CDCA8Q53HL2 280 aa7.62□□□□□ -1.19
CDR1-202ENST00000625883 KANK4Q5T7N3 995 aaPredicted RBP7.62□□□□□ -1.19
CDR1-202ENST00000625883 USP17L2Q6R6M4 530 aa7.62□□□□□ -1.19
CDR1-202ENST00000625883 USP17L1Q7RTZ2 530 aa7.62□□□□□ -1.19
CDR1-202ENST00000625883 CHIC2Q9UKJ5 165 aa7.62□□□□□ -1.19
CDR1-202ENST00000625883 TRIM26Q12899 539 aaPredicted RBP7.62□□□□□ -1.19
CDR1-202ENST00000625883 TRIM32Q13049 653 aa7.62□□□□□ -1.19
CDR1-202ENST00000625883 AGERQ15109 404 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms