RNA–Protein interactions for RNA: ENST00000625023.1

AC002540.1-201, humanhuman

BASIC

Gene AC002540.1, Length 1,349 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC002540.1-201ENST00000625023 CENPJQ9HC77 1338 aaPredicted RBP12.18□□□□□ -0.46
AC002540.1-201ENST00000625023 PMFBP1Q8TBY8 1022 aa12.17□□□□□ -0.46
AC002540.1-201ENST00000625023 NUDT16Q96DE0 195 aaKnown RBP12.17□□□□□ -0.46
AC002540.1-201ENST00000625023 CDK19Q9BWU1 502 aa12.17□□□□□ -0.46
AC002540.1-201ENST00000625023 CRYBG1Q9Y4K1 1723 aa12.17□□□□□ -0.46
AC002540.1-201ENST00000625023 AFF2P51816 1311 aa12.17□□□□□ -0.46
AC002540.1-201ENST00000625023 PLEKHG3A1L390 1219 aa12.16□□□□□ -0.46
AC002540.1-201ENST00000625023 ROCK2O75116 1388 aaKnown RBP12.16□□□□□ -0.46
AC002540.1-201ENST00000625023 BCL9LQ86UU0 1499 aa12.16□□□□□ -0.46
AC002540.1-201ENST00000625023 PSME1Q06323 249 aa12.15□□□□□ -0.46
AC002540.1-201ENST00000625023 MEX3CQ5U5Q3 659 aaKnown RBP12.15□□□□□ -0.46
AC002540.1-201ENST00000625023 CCDC61Q9Y6R9 512 aa12.15□□□□□ -0.46
AC002540.1-201ENST00000625023 SBNO2Q9Y2G9 1366 aa12.15□□□□□ -0.46
AC002540.1-201ENST00000625023 CDK12Q9NYV4 1490 aaPredicted RBP12.15□□□□□ -0.46
AC002540.1-201ENST00000625023 SLIT2O94813 1529 aa12.15□□□□□ -0.46
AC002540.1-201ENST00000625023 ARHGEF10O15013 1369 aa12.14□□□□□ -0.47
AC002540.1-201ENST00000625023 C8orf37Q96NL8 207 aa12.14□□□□□ -0.47
AC002540.1-201ENST00000625023 TONSLQ96HA7 1378 aa12.14□□□□□ -0.47
AC002540.1-201ENST00000625023 ADAMTS2O95450 1211 aa12.13□□□□□ -0.47
AC002540.1-201ENST00000625023 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.13□□□□□ -0.47
AC002540.1-201ENST00000625023 CLSPNQ9HAW4 1339 aa12.13□□□□□ -0.47
AC002540.1-201ENST00000625023 ATRNO75882 1429 aa12.12□□□□□ -0.47
AC002540.1-201ENST00000625023 SSH2Q76I76 1423 aa12.12□□□□□ -0.47
AC002540.1-201ENST00000625023 NGLY1Q96IV0 654 aa12.11□□□□□ -0.47
AC002540.1-201ENST00000625023 ACEP12821 1306 aa12.11□□□□□ -0.47
AC002540.1-201ENST00000625023 RBM42Q9BTD8 480 aaKnown RBP12.11□□□□□ -0.47
AC002540.1-201ENST00000625023 QTRT2Q9H974 415 aaKnown RBP12.11□□□□□ -0.47
AC002540.1-201ENST00000625023 CABP2Q9NPB3 220 aa12.11□□□□□ -0.47
AC002540.1-201ENST00000625023 NWD2Q9ULI1 1742 aa12.1□□□□□ -0.47
AC002540.1-201ENST00000625023 PPIP5K1Q6PFW1 1433 aa12.1□□□□□ -0.47
AC002540.1-201ENST00000625023 RXRBP28702 533 aa12.1□□□□□ -0.47
AC002540.1-201ENST00000625023 NGDNQ8NEJ9 315 aaKnown RBP12.1□□□□□ -0.47
AC002540.1-201ENST00000625023 CABLES1Q8TDN4 633 aa12.1□□□□□ -0.47
AC002540.1-201ENST00000625023 BRD4O60885 1362 aaPredicted RBP12.09□□□□□ -0.47
AC002540.1-201ENST00000625023 RGS12O14924 1447 aa12.09□□□□□ -0.47
AC002540.1-201ENST00000625023 RBM6P78332 1123 aaKnown RBP12.09□□□□□ -0.47
AC002540.1-201ENST00000625023 CARD11Q9BXL7 1154 aa12.09□□□□□ -0.47
AC002540.1-201ENST00000625023 PCGF6Q9BYE7 350 aa12.09□□□□□ -0.47
AC002540.1-201ENST00000625023 USP21Q9UK80 565 aa12.09□□□□□ -0.47
AC002540.1-201ENST00000625023 TIMELESSQ9UNS1 1208 aa12.09□□□□□ -0.47
AC002540.1-201ENST00000625023 PLCH1Q4KWH8 1693 aa12.08□□□□□ -0.48
AC002540.1-201ENST00000625023 SRPK2P78362 688 aaKnown RBP12.08□□□□□ -0.48
AC002540.1-201ENST00000625023 TESK2Q96S53 571 aa12.08□□□□□ -0.48
AC002540.1-201ENST00000625023 TRPC5Q9UL62 973 aaPredicted RBP12.08□□□□□ -0.48
AC002540.1-201ENST00000625023 EP400Q96L91 3159 aa12.08□□□□□ -0.48
AC002540.1-201ENST00000625023 EVC2Q86UK5 1308 aa12.07□□□□□ -0.48
AC002540.1-201ENST00000625023 PHRF1Q9P1Y6 1649 aaKnown RBP12.07□□□□□ -0.48
AC002540.1-201ENST00000625023 USP6P35125 1406 aa12.07□□□□□ -0.48
AC002540.1-201ENST00000625023 CPSF1Q10570 1443 aaKnown RBP12.07□□□□□ -0.48
AC002540.1-201ENST00000625023 NRAPQ86VF7 1730 aa12.07□□□□□ -0.48
AC002540.1-201ENST00000625023 AKAP12Q02952 1782 aa12.07□□□□□ -0.48
AC002540.1-201ENST00000625023 FAM83GA6ND36 823 aa12.07□□□□□ -0.48
AC002540.1-201ENST00000625023 CABP1Q9NZU7 370 aa12.07□□□□□ -0.48
AC002540.1-201ENST00000625023 GLI3P10071 1580 aa12.07□□□□□ -0.48
AC002540.1-201ENST00000625023 USP19O94966 1318 aa12.07□□□□□ -0.48
AC002540.1-201ENST00000625023 UNC5CLQ8IV45 518 aa12.06□□□□□ -0.48
AC002540.1-201ENST00000625023 PUS7Q96PZ0 661 aaKnown RBP12.06□□□□□ -0.48
AC002540.1-201ENST00000625023 CD163L1Q9NR16 1453 aa12.05□□□□□ -0.48
AC002540.1-201ENST00000625023 NRKQ7Z2Y5 1582 aa12.05□□□□□ -0.48
AC002540.1-201ENST00000625023 COL14A1Q05707 1796 aaKnown RBP12.05□□□□□ -0.48
AC002540.1-201ENST00000625023 ATAD2Q6PL18 1390 aa12.05□□□□□ -0.48
AC002540.1-201ENST00000625023 ONECUT3O60422 494 aaPredicted RBP12.04□□□□□ -0.48
AC002540.1-201ENST00000625023 LMOD2Q6P5Q4 547 aa12.04□□□□□ -0.48
AC002540.1-201ENST00000625023 GJD4Q96KN9 370 aaPredicted RBP12.04□□□□□ -0.48
AC002540.1-201ENST00000625023 PIK3C2AO00443 1686 aa12.03□□□□□ -0.48
AC002540.1-201ENST00000625023 MON2Q7Z3U7 1717 aa12.03□□□□□ -0.48
AC002540.1-201ENST00000625023 VPS72Q15906 364 aa12.03□□□□□ -0.48
AC002540.1-201ENST00000625023 LMO7Q8WWI1 1683 aa12.02□□□□□ -0.49
AC002540.1-201ENST00000625023 SLIT3O75094 1523 aa12.02□□□□□ -0.49
AC002540.1-201ENST00000625023 CPDO75976 1380 aa12.02□□□□□ -0.49
AC002540.1-201ENST00000625023 ST20-MTHFSA0A0A6YYL1 179 aa12.02□□□□□ -0.49
AC002540.1-201ENST00000625023 PAK3O75914 559 aaPredicted RBP12.02□□□□□ -0.49
AC002540.1-201ENST00000625023 CHRDL2Q6WN34 429 aa12.02□□□□□ -0.49
AC002540.1-201ENST00000625023 UPF1Q92900 1129 aaKnown RBP eCLIP12.01□□□□□ -0.49
AC002540.1-201ENST00000625023 ZNF692Q9BU19 519 aaPredicted RBP12.01□□□□□ -0.49
AC002540.1-201ENST00000625023 USP54Q70EL1 1684 aa12.01□□□□□ -0.49
AC002540.1-201ENST00000625023 KIAA0232Q92628 1395 aa12□□□□□ -0.49
AC002540.1-201ENST00000625023 ABTB2Q8N961 1025 aa12□□□□□ -0.49
AC002540.1-201ENST00000625023 COL18A1P39060 1754 aa11.99□□□□□ -0.49
AC002540.1-201ENST00000625023 USP47Q96K76 1375 aa11.99□□□□□ -0.49
AC002540.1-201ENST00000625023 TTC21BQ7Z4L5 1316 aa11.99□□□□□ -0.49
AC002540.1-201ENST00000625023 CAMTA1Q9Y6Y1 1673 aa11.99□□□□□ -0.49
AC002540.1-201ENST00000625023 GCP02774 474 aa11.99□□□□□ -0.49
AC002540.1-201ENST00000625023 SAMD1Q6SPF0 538 aaPredicted RBP11.99□□□□□ -0.49
AC002540.1-201ENST00000625023 BTG4Q9NY30 223 aa11.99□□□□□ -0.49
AC002540.1-201ENST00000625023 BRWD3Q6RI45 1802 aa11.99□□□□□ -0.49
AC002540.1-201ENST00000625023 HAP1P54257 671 aaPredicted RBP11.98□□□□□ -0.49
AC002540.1-201ENST00000625023 NUTM2GQ5VZR2 741 aa11.98□□□□□ -0.49
AC002540.1-201ENST00000625023 NLRP13Q86W25 1043 aa11.98□□□□□ -0.49
AC002540.1-201ENST00000625023 USP31Q70CQ4 1352 aa11.97□□□□□ -0.49
AC002540.1-201ENST00000625023 TTC21AQ8NDW8 1320 aa11.97□□□□□ -0.49
AC002540.1-201ENST00000625023 PLCB2Q00722 1185 aa11.97□□□□□ -0.49
AC002540.1-201ENST00000625023 SLC12A5Q9H2X9 1139 aa11.97□□□□□ -0.49
AC002540.1-201ENST00000625023 ATF5Q9Y2D1 282 aaPredicted RBP11.97□□□□□ -0.49
AC002540.1-201ENST00000625023 SPATA31A5Q5VU36 1347 aa11.96□□□□□ -0.49
AC002540.1-201ENST00000625023 SPATA31A7Q8IWB4 1347 aa11.96□□□□□ -0.49
AC002540.1-201ENST00000625023 NFAT5O94916 1531 aa11.96□□□□□ -0.49
AC002540.1-201ENST00000625023 THSD7AQ9UPZ6 1657 aa11.96□□□□□ -0.49
AC002540.1-201ENST00000625023 PLEKHG5O94827 1062 aa11.96□□□□□ -0.49
AC002540.1-201ENST00000625023 ZC3H6P61129 1189 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms