RNA–Protein interactions for RNA: ENST00000624949.1

PCDHB12-203, Transcript of protocadherin beta 12, humanhuman

TSL 2 BASIC

Gene PCDHB12, Length 1,963 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12-203ENST00000624949 USP6P35125 1406 aa27.53■■■□□ 2
PCDHB12-203ENST00000624949 DCCP43146 1447 aa27.53■■■□□ 2
PCDHB12-203ENST00000624949 CADPS2Q86UW7 1296 aa27.52■■■□□ 2
PCDHB12-203ENST00000624949 C1orf167Q5SNV9 1468 aa27.51■■□□□ 1.99
PCDHB12-203ENST00000624949 NME9Q86XW9 330 aa27.51■■□□□ 1.99
PCDHB12-203ENST00000624949 TTC21BQ7Z4L5 1316 aa27.49■■□□□ 1.99
PCDHB12-203ENST00000624949 BRD4O60885 1362 aaPredicted RBP27.49■■□□□ 1.99
PCDHB12-203ENST00000624949 NRKQ7Z2Y5 1582 aa27.49■■□□□ 1.99
PCDHB12-203ENST00000624949 MST1RQ04912 1400 aa27.49■■□□□ 1.99
PCDHB12-203ENST00000624949 ZRANB1Q9UGI0 708 aa27.48■■□□□ 1.99
PCDHB12-203ENST00000624949 ANKRD26Q9UPS8 1709 aa27.47■■□□□ 1.99
PCDHB12-203ENST00000624949 FAM9BQ8IZU0 186 aa27.46■■□□□ 1.99
PCDHB12-203ENST00000624949 SSH2Q76I76 1423 aa27.44■■□□□ 1.98
PCDHB12-203ENST00000624949 FOXO3O43524 673 aa27.44■■□□□ 1.98
PCDHB12-203ENST00000624949 PSME1Q06323 249 aa27.44■■□□□ 1.98
PCDHB12-203ENST00000624949 PAK3O75914 559 aaPredicted RBP27.42■■□□□ 1.98
PCDHB12-203ENST00000624949 COG3Q96JB2 828 aa27.42■■□□□ 1.98
PCDHB12-203ENST00000624949 TTC21AQ8NDW8 1320 aa27.41■■□□□ 1.98
PCDHB12-203ENST00000624949 XPCQ01831 940 aaPredicted RBP27.4■■□□□ 1.98
PCDHB12-203ENST00000624949 LTBP4Q8N2S1 1624 aa27.4■■□□□ 1.98
PCDHB12-203ENST00000624949 KIF1AQ12756 1690 aa27.39■■□□□ 1.98
PCDHB12-203ENST00000624949 PNISRQ8TF01 805 aaKnown RBP27.38■■□□□ 1.97
PCDHB12-203ENST00000624949 GTF3C3Q9Y5Q9 886 aa27.38■■□□□ 1.97
PCDHB12-203ENST00000624949 FBLN1P23142 703 aa27.37■■□□□ 1.97
PCDHB12-203ENST00000624949 SLAIN2Q9P270 581 aa27.37■■□□□ 1.97
PCDHB12-203ENST00000624949 MTHFSP49914 203 aa27.36■■□□□ 1.97
PCDHB12-203ENST00000624949 NUTM2GQ5VZR2 741 aa27.35■■□□□ 1.97
PCDHB12-203ENST00000624949 ABTB2Q8N961 1025 aa27.35■■□□□ 1.97
PCDHB12-203ENST00000624949 DDX17Q92841 729 aaKnown RBP27.35■■□□□ 1.97
PCDHB12-203ENST00000624949 PIK3C2AO00443 1686 aa27.34■■□□□ 1.97
PCDHB12-203ENST00000624949 OVOS2A0A0J9YW53 1432 aa27.33■■□□□ 1.97
PCDHB12-203ENST00000624949 OVOS2Q6IE36 1432 aa27.33■■□□□ 1.97
PCDHB12-203ENST00000624949 KRT28Q7Z3Y7 464 aa27.33■■□□□ 1.97
PCDHB12-203ENST00000624949 NLRP6P59044 892 aa27.32■■□□□ 1.96
PCDHB12-203ENST00000624949 BRINP3Q76B58 766 aa27.31■■□□□ 1.96
PCDHB12-203ENST00000624949 SOX12O15370 315 aa27.3■■□□□ 1.96
PCDHB12-203ENST00000624949 PPM1GO15355 546 aaPredicted RBP27.28■■□□□ 1.96
PCDHB12-203ENST00000624949 USP31Q70CQ4 1352 aa27.28■■□□□ 1.96
PCDHB12-203ENST00000624949 NPHP3Q7Z494 1330 aa27.28■■□□□ 1.96
PCDHB12-203ENST00000624949 LMOD2Q6P5Q4 547 aa27.28■■□□□ 1.96
PCDHB12-203ENST00000624949 CFAP53Q96M91 514 aa27.27■■□□□ 1.96
PCDHB12-203ENST00000624949 POLKQ9UBT6 870 aa27.27■■□□□ 1.96
PCDHB12-203ENST00000624949 MAP2P11137 1827 aaKnown RBP27.27■■□□□ 1.96
PCDHB12-203ENST00000624949 RRS1Q15050 365 aaKnown RBP27.26■■□□□ 1.95
PCDHB12-203ENST00000624949 WDR43Q15061 677 aaKnown RBP eCLIP27.26■■□□□ 1.95
PCDHB12-203ENST00000624949 TRPM3Q9HCF6 1732 aaPredicted RBP27.25■■□□□ 1.95
PCDHB12-203ENST00000624949 EMILIN1Q9Y6C2 1016 aa27.25■■□□□ 1.95
PCDHB12-203ENST00000624949 AATKQ6ZMQ8 1374 aa27.24■■□□□ 1.95
PCDHB12-203ENST00000624949 PLEKHG5O94827 1062 aa27.24■■□□□ 1.95
PCDHB12-203ENST00000624949 HNRNPUQ00839 825 aaKnown RBP eCLIP27.24■■□□□ 1.95
PCDHB12-203ENST00000624949 MARF1Q9Y4F3 1742 aaKnown RBP27.22■■□□□ 1.95
PCDHB12-203ENST00000624949 ADAMTS8Q9UP79 889 aa27.21■■□□□ 1.95
PCDHB12-203ENST00000624949 PXDNQ92626 1479 aa27.19■■□□□ 1.94
PCDHB12-203ENST00000624949 USP54Q70EL1 1684 aa27.19■■□□□ 1.94
PCDHB12-203ENST00000624949 SENP3-EIF4A1A0A087X0R7 540 aa27.18■■□□□ 1.94
PCDHB12-203ENST00000624949 SHPRHQ149N8 1683 aa27.17■■□□□ 1.94
PCDHB12-203ENST00000624949 SMG6Q86US8 1419 aaKnown RBP27.16■■□□□ 1.94
PCDHB12-203ENST00000624949 SBNO1A3KN83 1393 aa27.16■■□□□ 1.94
PCDHB12-203ENST00000624949 ALS2Q96Q42 1657 aa27.16■■□□□ 1.94
PCDHB12-203ENST00000624949 COL3A1P02461 1466 aaPredicted RBP27.15■■□□□ 1.94
PCDHB12-203ENST00000624949 PNPLA6Q8IY17 1366 aa27.15■■□□□ 1.94
PCDHB12-203ENST00000624949 TNS3Q68CZ2 1445 aa27.14■■□□□ 1.93
PCDHB12-203ENST00000624949 MAP3K19Q56UN5 1328 aa27.13■■□□□ 1.93
PCDHB12-203ENST00000624949 DIAPH1O60610 1272 aaKnown RBP27.13■■□□□ 1.93
PCDHB12-203ENST00000624949 CDK12Q9NYV4 1490 aaPredicted RBP27.13■■□□□ 1.93
PCDHB12-203ENST00000624949 SPATA31A3Q5VYP0 1347 aa27.12■■□□□ 1.93
PCDHB12-203ENST00000624949 ROBO1Q9Y6N7 1651 aa27.12■■□□□ 1.93
PCDHB12-203ENST00000624949 SOS2Q07890 1332 aaPredicted RBP27.12■■□□□ 1.93
PCDHB12-203ENST00000624949 U2SURPO15042 1029 aaKnown RBP27.11■■□□□ 1.93
PCDHB12-203ENST00000624949 NUDCQ9Y266 331 aa27.11■■□□□ 1.93
PCDHB12-203ENST00000624949 PEAK1Q9H792 1746 aa27.1■■□□□ 1.93
PCDHB12-203ENST00000624949 KCNH5Q8NCM2 988 aa27.1■■□□□ 1.93
PCDHB12-203ENST00000624949 INSRP06213 1382 aa27.1■■□□□ 1.93
PCDHB12-203ENST00000624949 NHSL1Q5SYE7 1610 aa27.1■■□□□ 1.93
PCDHB12-203ENST00000624949 U2AF1L5P0DN76 240 aaPredicted RBP27.09■■□□□ 1.93
PCDHB12-203ENST00000624949 AMPHP49418 695 aa27.09■■□□□ 1.93
PCDHB12-203ENST00000624949 U2AF1Q01081 240 aaKnown RBP eCLIP27.09■■□□□ 1.93
PCDHB12-203ENST00000624949 GCP02774 474 aa27.09■■□□□ 1.93
PCDHB12-203ENST00000624949 CCDC146Q8IYE0 955 aa27.09■■□□□ 1.93
PCDHB12-203ENST00000624949 BLMP54132 1417 aaPredicted RBP27.08■■□□□ 1.93
PCDHB12-203ENST00000624949 ZBTB7CA1YPR0 619 aa27.08■■□□□ 1.93
PCDHB12-203ENST00000624949 TOM1O60784 492 aa27.08■■□□□ 1.93
PCDHB12-203ENST00000624949 USP19O94966 1318 aa27.08■■□□□ 1.93
PCDHB12-203ENST00000624949 HSP90AB2PQ58FF8 381 aa27.08■■□□□ 1.92
PCDHB12-203ENST00000624949 PIP4K2BP78356 416 aa27.07■■□□□ 1.92
PCDHB12-203ENST00000624949 NFAT5O94916 1531 aa27.07■■□□□ 1.92
PCDHB12-203ENST00000624949 ARHGEF10O15013 1369 aa27.06■■□□□ 1.92
PCDHB12-203ENST00000624949 SLIT3O75094 1523 aa27.06■■□□□ 1.92
PCDHB12-203ENST00000624949 CABLES1Q8TDN4 633 aa27.06■■□□□ 1.92
PCDHB12-203ENST00000624949 FLT4P35916 1363 aa27.05■■□□□ 1.92
PCDHB12-203ENST00000624949 MED1Q15648 1581 aaPredicted RBP27.05■■□□□ 1.92
PCDHB12-203ENST00000624949 LTN1O94822 1766 aa27.04■■□□□ 1.92
PCDHB12-203ENST00000624949 UBAP1LF5GYI3 381 aa27.04■■□□□ 1.92
PCDHB12-203ENST00000624949 SALL2Q9Y467 1007 aaPredicted RBP27.04■■□□□ 1.92
PCDHB12-203ENST00000624949 IL13P35225 146 aa27.04■■□□□ 1.92
PCDHB12-203ENST00000624949 HOXC9P31274 260 aa27.02■■□□□ 1.92
PCDHB12-203ENST00000624949 EIF4A2Q14240 407 aaKnown RBP27.02■■□□□ 1.92
PCDHB12-203ENST00000624949 CERKQ8TCT0 537 aa27■■□□□ 1.91
PCDHB12-203ENST00000624949 ZBED9Q6R2W3 1325 aa27■■□□□ 1.91
PCDHB12-203ENST00000624949 ZC3H6P61129 1189 aaKnown RBP27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms