RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 FAM83GA6ND36 823 aa16.17■□□□□ 0.18
LINC00963-214ENST00000622680 MYT1Q01538 1121 aa16.17■□□□□ 0.18
LINC00963-214ENST00000622680 EIF3AQ14152 1382 aaKnown RBP16.16■□□□□ 0.18
LINC00963-214ENST00000622680 QRICH2Q9H0J4 1663 aa16.16■□□□□ 0.18
LINC00963-214ENST00000622680 KRT27Q7Z3Y8 459 aa16.16■□□□□ 0.18
LINC00963-214ENST00000622680 KDM2AQ9Y2K7 1162 aa16.16■□□□□ 0.18
LINC00963-214ENST00000622680 NRKQ7Z2Y5 1582 aa16.16■□□□□ 0.18
LINC00963-214ENST00000622680 ACIN1Q9UKV3 1341 aaKnown RBP16.16■□□□□ 0.18
LINC00963-214ENST00000622680 GPRASP1Q5JY77 1395 aa16.15■□□□□ 0.18
LINC00963-214ENST00000622680 BTG4Q9NY30 223 aa16.15■□□□□ 0.18
LINC00963-214ENST00000622680 RREB1Q92766 1687 aa16.14■□□□□ 0.18
LINC00963-214ENST00000622680 SF3B2Q13435 895 aaKnown RBP16.14■□□□□ 0.17
LINC00963-214ENST00000622680 FAM98CQ17RN3 349 aaKnown RBP16.14■□□□□ 0.17
LINC00963-214ENST00000622680 WNK3Q9BYP7 1800 aa16.14■□□□□ 0.17
LINC00963-214ENST00000622680 ONECUT3O60422 494 aaPredicted RBP16.13■□□□□ 0.17
LINC00963-214ENST00000622680 DCAF11Q8TEB1 546 aa16.13■□□□□ 0.17
LINC00963-214ENST00000622680 NUP188Q5SRE5 1749 aa16.13■□□□□ 0.17
LINC00963-214ENST00000622680 LMO7Q8WWI1 1683 aa16.12■□□□□ 0.17
LINC00963-214ENST00000622680 WASLO00401 505 aaPredicted RBP16.12■□□□□ 0.17
LINC00963-214ENST00000622680 RGPD5Q99666 1765 aa16.12■□□□□ 0.17
LINC00963-214ENST00000622680 SBF2Q86WG5 1849 aa16.12■□□□□ 0.17
LINC00963-214ENST00000622680 FAM182BQ5T319 152 aa16.11■□□□□ 0.17
LINC00963-214ENST00000622680 PAK3O75914 559 aaPredicted RBP16.1■□□□□ 0.17
LINC00963-214ENST00000622680 NGDNQ8NEJ9 315 aaKnown RBP16.1■□□□□ 0.17
LINC00963-214ENST00000622680 PARP4Q9UKK3 1724 aaKnown RBP16.08■□□□□ 0.17
LINC00963-214ENST00000622680 PSDA5PKW4 1024 aaPredicted RBP16.08■□□□□ 0.16
LINC00963-214ENST00000622680 SPATA31A5Q5VU36 1347 aa16.08■□□□□ 0.16
LINC00963-214ENST00000622680 SPATA31A7Q8IWB4 1347 aa16.08■□□□□ 0.16
LINC00963-214ENST00000622680 KIAA0232Q92628 1395 aa16.08■□□□□ 0.16
LINC00963-214ENST00000622680 BAG6P46379 1132 aa16.07■□□□□ 0.16
LINC00963-214ENST00000622680 PRDM11Q9NQV5 511 aa16.07■□□□□ 0.16
LINC00963-214ENST00000622680 AKAP12Q02952 1782 aa16.07■□□□□ 0.16
LINC00963-214ENST00000622680 CHRNA2Q15822 529 aa16.05■□□□□ 0.16
LINC00963-214ENST00000622680 NUTM2GQ5VZR2 741 aa16.05■□□□□ 0.16
LINC00963-214ENST00000622680 NUDT16Q96DE0 195 aaKnown RBP16.05■□□□□ 0.16
LINC00963-214ENST00000622680 CAMTA1Q9Y6Y1 1673 aa16.05■□□□□ 0.16
LINC00963-214ENST00000622680 EN1Q05925 392 aaPredicted RBP16.04■□□□□ 0.16
LINC00963-214ENST00000622680 PIK3C2AO00443 1686 aa16.04■□□□□ 0.16
LINC00963-214ENST00000622680 DISP2A7MBM2 1401 aa16.03■□□□□ 0.16
LINC00963-214ENST00000622680 POLR3AO14802 1390 aaPredicted RBP16.03■□□□□ 0.16
LINC00963-214ENST00000622680 LRRC37A3O60309 1634 aa16.03■□□□□ 0.16
LINC00963-214ENST00000622680 TRPM1Q7Z4N2 1603 aa16.02■□□□□ 0.16
LINC00963-214ENST00000622680 SPATA31A1Q5TZJ5 1347 aa16.02■□□□□ 0.16
LINC00963-214ENST00000622680 ZC3H6P61129 1189 aaKnown RBP16.02■□□□□ 0.16
LINC00963-214ENST00000622680 CDK19Q9BWU1 502 aa16.02■□□□□ 0.16
LINC00963-214ENST00000622680 STRN4Q9NRL3 753 aa16.02■□□□□ 0.16
LINC00963-214ENST00000622680 COL18A1P39060 1754 aa16.02■□□□□ 0.15
LINC00963-214ENST00000622680 PEAK1Q9H792 1746 aa16.02■□□□□ 0.15
LINC00963-214ENST00000622680 SSH2Q76I76 1423 aa16.02■□□□□ 0.15
LINC00963-214ENST00000622680 ACEP12821 1306 aa16.01■□□□□ 0.15
LINC00963-214ENST00000622680 HRCP23327 699 aa16.01■□□□□ 0.15
LINC00963-214ENST00000622680 RGPD3A6NKT7 1758 aaPredicted RBP16■□□□□ 0.15
LINC00963-214ENST00000622680 RGPD4Q7Z3J3 1758 aa16■□□□□ 0.15
LINC00963-214ENST00000622680 STAC3Q96MF2 364 aa15.99■□□□□ 0.15
LINC00963-214ENST00000622680 USP35Q9P2H5 1018 aa15.99■□□□□ 0.15
LINC00963-214ENST00000622680 R3HDM1Q15032 1099 aaKnown RBP15.98■□□□□ 0.15
LINC00963-214ENST00000622680 PPIP5K1Q6PFW1 1433 aa15.98■□□□□ 0.15
LINC00963-214ENST00000622680 KAT6BQ8WYB5 2073 aa15.98■□□□□ 0.15
LINC00963-214ENST00000622680 TRIM37O94972 964 aa15.97■□□□□ 0.15
LINC00963-214ENST00000622680 EZH2Q15910 746 aaKnown RBP15.97■□□□□ 0.15
LINC00963-214ENST00000622680 COL5A2P05997 1499 aaPredicted RBP15.97■□□□□ 0.15
LINC00963-214ENST00000622680 USP19O94966 1318 aa15.96■□□□□ 0.15
LINC00963-214ENST00000622680 LTN1O94822 1766 aa15.96■□□□□ 0.15
LINC00963-214ENST00000622680 SLIT3O75094 1523 aa15.96■□□□□ 0.15
LINC00963-214ENST00000622680 NBPF1Q3BBV0 1214 aa15.96■□□□□ 0.15
LINC00963-214ENST00000622680 NBPF8Q3BBV2 869 aa15.96■□□□□ 0.15
LINC00963-214ENST00000622680 MON2Q7Z3U7 1717 aa15.96■□□□□ 0.15
LINC00963-214ENST00000622680 LARP1Q6PKG0 1096 aaKnown RBP15.94■□□□□ 0.14
LINC00963-214ENST00000622680 ABTB2Q8N961 1025 aa15.94■□□□□ 0.14
LINC00963-214ENST00000622680 CCDC61Q9Y6R9 512 aa15.94■□□□□ 0.14
LINC00963-214ENST00000622680 CPDO75976 1380 aa15.94■□□□□ 0.14
LINC00963-214ENST00000622680 PLEKHG3A1L390 1219 aa15.93■□□□□ 0.14
LINC00963-214ENST00000622680 CASZ1Q86V15 1759 aa15.92■□□□□ 0.14
LINC00963-214ENST00000622680 SRPK2P78362 688 aaKnown RBP15.92■□□□□ 0.14
LINC00963-214ENST00000622680 FAM196AQ6ZSG2 479 aa15.92■□□□□ 0.14
LINC00963-214ENST00000622680 CAMKK2Q96RR4 588 aa15.92■□□□□ 0.14
LINC00963-214ENST00000622680 CABP2Q9NPB3 220 aa15.92■□□□□ 0.14
LINC00963-214ENST00000622680 CENPJQ9HC77 1338 aaPredicted RBP15.92■□□□□ 0.14
LINC00963-214ENST00000622680 EVA1CP58658 441 aa15.91■□□□□ 0.14
LINC00963-214ENST00000622680 BARGINQ6ZT62 677 aa15.91■□□□□ 0.14
LINC00963-214ENST00000622680 USP6P35125 1406 aa15.91■□□□□ 0.14
LINC00963-214ENST00000622680 ZBTB7CA1YPR0 619 aa15.9■□□□□ 0.14
LINC00963-214ENST00000622680 APBA3O96018 575 aa15.9■□□□□ 0.14
LINC00963-214ENST00000622680 PARD3Q8TEW0 1356 aa15.89■□□□□ 0.13
LINC00963-214ENST00000622680 CRB1P82279 1406 aa15.89■□□□□ 0.13
LINC00963-214ENST00000622680 PDE3BQ13370 1112 aa15.89■□□□□ 0.13
LINC00963-214ENST00000622680 TCP11L2Q8N4U5 519 aa15.89■□□□□ 0.13
LINC00963-214ENST00000622680 USP54Q70EL1 1684 aa15.89■□□□□ 0.13
LINC00963-214ENST00000622680 GCP02774 474 aa15.87■□□□□ 0.13
LINC00963-214ENST00000622680 NLRP13Q86W25 1043 aa15.87■□□□□ 0.13
LINC00963-214ENST00000622680 OVOS2A0A0G2JMS6 1433 aa15.86■□□□□ 0.13
LINC00963-214ENST00000622680 OVOS2A0A0J9YW53 1432 aa15.86■□□□□ 0.13
LINC00963-214ENST00000622680 OVOS2Q6IE36 1432 aa15.86■□□□□ 0.13
LINC00963-214ENST00000622680 NFAT5O94916 1531 aa15.85■□□□□ 0.13
LINC00963-214ENST00000622680 MYOM1P52179 1685 aa15.85■□□□□ 0.13
LINC00963-214ENST00000622680 NHSQ6T4R5 1651 aa15.84■□□□□ 0.13
LINC00963-214ENST00000622680 CABP1Q9NZU7 370 aa15.84■□□□□ 0.13
LINC00963-214ENST00000622680 BTAF1O14981 1849 aa15.84■□□□□ 0.13
LINC00963-214ENST00000622680 BRD4O60885 1362 aaPredicted RBP15.84■□□□□ 0.13
LINC00963-214ENST00000622680 CPSF1Q10570 1443 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms