RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 COL3A1P02461 1466 aaPredicted RBP15.43■□□□□ 0.06
TP53-227ENST00000622645 NCBP3Q53F19 620 aaKnown RBP15.43■□□□□ 0.06
TP53-227ENST00000622645 TRIM35Q9UPQ4 493 aa15.43■□□□□ 0.06
TP53-227ENST00000622645 SPATA31D1Q6ZQQ2 1576 aa15.43■□□□□ 0.06
TP53-227ENST00000622645 MAPK8IP3Q9UPT6 1336 aa15.42■□□□□ 0.06
TP53-227ENST00000622645 PPM1GO15355 546 aaPredicted RBP15.42■□□□□ 0.06
TP53-227ENST00000622645 DIAPH1O60610 1272 aaKnown RBP15.42■□□□□ 0.06
TP53-227ENST00000622645 ADGRB2O60241 1585 aa15.42■□□□□ 0.06
TP53-227ENST00000622645 MED14O60244 1454 aa15.42■□□□□ 0.06
TP53-227ENST00000622645 ESF1Q9H501 851 aaKnown RBP15.41■□□□□ 0.06
TP53-227ENST00000622645 TXNDC2Q86VQ3 553 aa15.4■□□□□ 0.06
TP53-227ENST00000622645 METP08581 1390 aa15.4■□□□□ 0.06
TP53-227ENST00000622645 EXOSC9Q06265 439 aaKnown RBP15.4■□□□□ 0.06
TP53-227ENST00000622645 ZMYM3Q14202 1370 aa15.4■□□□□ 0.06
TP53-227ENST00000622645 RIPK4P57078 832 aa15.4■□□□□ 0.06
TP53-227ENST00000622645 PCDHB15Q9Y5E8 787 aa15.4■□□□□ 0.06
TP53-227ENST00000622645 PNPLA6Q8IY17 1366 aa15.39■□□□□ 0.05
TP53-227ENST00000622645 POLKQ9UBT6 870 aa15.39■□□□□ 0.05
TP53-227ENST00000622645 NCKAP5LQ9HCH0 1330 aa15.38■□□□□ 0.05
TP53-227ENST00000622645 DLC1Q96QB1 1528 aa15.38■□□□□ 0.05
TP53-227ENST00000622645 WASLO00401 505 aaPredicted RBP15.38■□□□□ 0.05
TP53-227ENST00000622645 LAS1LQ9Y4W2 734 aaKnown RBP15.38■□□□□ 0.05
TP53-227ENST00000622645 ANKRD26Q9UPS8 1709 aa15.37■□□□□ 0.05
TP53-227ENST00000622645 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.36■□□□□ 0.05
TP53-227ENST00000622645 SMC4Q9NTJ3 1288 aa15.36■□□□□ 0.05
TP53-227ENST00000622645 DEKP35659 375 aaKnown RBP15.36■□□□□ 0.05
TP53-227ENST00000622645 ZKSCAN2Q63HK3 967 aa15.36■□□□□ 0.05
TP53-227ENST00000622645 NME9Q86XW9 330 aa15.36■□□□□ 0.05
TP53-227ENST00000622645 DDRGK1Q96HY6 314 aa15.36■□□□□ 0.05
TP53-227ENST00000622645 ZRANB1Q9UGI0 708 aa15.36■□□□□ 0.05
TP53-227ENST00000622645 SETD1AO15047 1707 aaKnown RBP15.36■□□□□ 0.05
TP53-227ENST00000622645 SLC4A3P48751 1232 aa15.35■□□□□ 0.05
TP53-227ENST00000622645 SSH1Q8WYL5 1049 aa15.35■□□□□ 0.05
TP53-227ENST00000622645 FCHSD2O94868 740 aa15.35■□□□□ 0.05
TP53-227ENST00000622645 PRKAR2BP31323 418 aa15.35■□□□□ 0.05
TP53-227ENST00000622645 EMILIN1Q9Y6C2 1016 aa15.35■□□□□ 0.05
TP53-227ENST00000622645 ATP7BP35670 1465 aa15.35■□□□□ 0.05
TP53-227ENST00000622645 PPIP5K1Q6PFW1 1433 aa15.34■□□□□ 0.05
TP53-227ENST00000622645 CT47B1P0C2W7 299 aaPredicted RBP15.34■□□□□ 0.05
TP53-227ENST00000622645 MVPQ14764 893 aaKnown RBP15.34■□□□□ 0.05
TP53-227ENST00000622645 FTSJ3Q8IY81 847 aaKnown RBP15.34■□□□□ 0.05
TP53-227ENST00000622645 PMFBP1Q8TBY8 1022 aa15.34■□□□□ 0.05
TP53-227ENST00000622645 HMOX1P09601 288 aa15.34■□□□□ 0.05
TP53-227ENST00000622645 DZIP1LQ8IYY4 767 aaKnown RBP15.34■□□□□ 0.05
TP53-227ENST00000622645 NUDT16Q96DE0 195 aaKnown RBP15.34■□□□□ 0.05
TP53-227ENST00000622645 PNNQ9H307 717 aaKnown RBP15.34■□□□□ 0.05
TP53-227ENST00000622645 NRXN3Q9Y4C0 1643 aa15.34■□□□□ 0.05
TP53-227ENST00000622645 AAMPQ13685 434 aa15.33■□□□□ 0.05
TP53-227ENST00000622645 RSPH6AQ9H0K4 717 aa15.33■□□□□ 0.05
TP53-227ENST00000622645 TRIM27P14373 513 aa15.33■□□□□ 0.04
TP53-227ENST00000622645 KIF20BQ96Q89 1820 aa15.33■□□□□ 0.04
TP53-227ENST00000622645 PHACTR3Q96KR7 559 aa15.32■□□□□ 0.04
TP53-227ENST00000622645 IL16Q14005 1332 aa15.32■□□□□ 0.04
TP53-227ENST00000622645 CPSF1Q10570 1443 aaKnown RBP15.32■□□□□ 0.04
TP53-227ENST00000622645 RTL5Q5HYW3 569 aaPredicted RBP15.32■□□□□ 0.04
TP53-227ENST00000622645 CCDC61Q9Y6R9 512 aa15.31■□□□□ 0.04
TP53-227ENST00000622645 HDGFP51858 240 aaKnown RBP15.31■□□□□ 0.04
TP53-227ENST00000622645 NOB1Q9ULX3 412 aaKnown RBP15.31■□□□□ 0.04
TP53-227ENST00000622645 TNRQ92752 1358 aa15.31■□□□□ 0.04
TP53-227ENST00000622645 LRRC7Q96NW7 1537 aa15.3■□□□□ 0.04
TP53-227ENST00000622645 EDC4Q6P2E9 1401 aaKnown RBP15.3■□□□□ 0.04
TP53-227ENST00000622645 RWDD1Q9H446 243 aaPredicted RBP15.3■□□□□ 0.04
TP53-227ENST00000622645 PDZRN3Q9UPQ7 1066 aa15.3■□□□□ 0.04
TP53-227ENST00000622645 SEC24BO95487 1268 aa15.3■□□□□ 0.04
TP53-227ENST00000622645 NEFMP07197 916 aa15.3■□□□□ 0.04
TP53-227ENST00000622645 RRS1Q15050 365 aaKnown RBP15.3■□□□□ 0.04
TP53-227ENST00000622645 ATF7IPQ6VMQ6 1270 aa15.3■□□□□ 0.04
TP53-227ENST00000622645 THUMPD2Q9BTF0 503 aaKnown RBP15.3■□□□□ 0.04
TP53-227ENST00000622645 FAM135BQ49AJ0 1406 aa15.29■□□□□ 0.04
TP53-227ENST00000622645 KIF13AQ9H1H9 1805 aa15.29■□□□□ 0.04
TP53-227ENST00000622645 IL13P35225 146 aa15.29■□□□□ 0.04
TP53-227ENST00000622645 ITPRIPQ8IWB1 547 aa15.29■□□□□ 0.04
TP53-227ENST00000622645 TMEM2Q9UHN6 1383 aa15.28■□□□□ 0.04
TP53-227ENST00000622645 PRR36Q9H6K5 1346 aa15.28■□□□□ 0.04
TP53-227ENST00000622645 COG3Q96JB2 828 aa15.28■□□□□ 0.04
TP53-227ENST00000622645 SIRT1Q96EB6 747 aa15.27■□□□□ 0.04
TP53-227ENST00000622645 DAXXQ9UER7 740 aaPredicted RBP15.27■□□□□ 0.04
TP53-227ENST00000622645 CDC42BPGQ6DT37 1551 aa15.27■□□□□ 0.03
TP53-227ENST00000622645 MAP2P11137 1827 aaKnown RBP15.27■□□□□ 0.03
TP53-227ENST00000622645 NUTM2FA1L443 756 aa15.27■□□□□ 0.03
TP53-227ENST00000622645 NFE2L2Q16236 605 aa15.27■□□□□ 0.03
TP53-227ENST00000622645 CPS1P31327 1500 aa15.27■□□□□ 0.03
TP53-227ENST00000622645 ROBO2Q9HCK4 1378 aa15.27■□□□□ 0.03
TP53-227ENST00000622645 USP19O94966 1318 aa15.26■□□□□ 0.03
TP53-227ENST00000622645 TMEM57Q8N5G2 664 aa15.26■□□□□ 0.03
TP53-227ENST00000622645 TECPR2O15040 1411 aa15.26■□□□□ 0.03
TP53-227ENST00000622645 CEBPAP49715 358 aaPredicted RBP15.26■□□□□ 0.03
TP53-227ENST00000622645 LTKP29376 864 aa15.25■□□□□ 0.03
TP53-227ENST00000622645 DDX19BQ9UMR2 479 aa15.25■□□□□ 0.03
TP53-227ENST00000622645 AATKQ6ZMQ8 1374 aa15.24■□□□□ 0.03
TP53-227ENST00000622645 KIF16BQ96L93 1317 aa15.23■□□□□ 0.03
TP53-227ENST00000622645 ADAMTS13Q76LX8 1427 aa15.23■□□□□ 0.03
TP53-227ENST00000622645 ELL2O00472 640 aaPredicted RBP15.23■□□□□ 0.03
TP53-227ENST00000622645 PLPPR3Q6T4P5 718 aa15.23■□□□□ 0.03
TP53-227ENST00000622645 SLC26A8Q96RN1 970 aa15.23■□□□□ 0.03
TP53-227ENST00000622645 ZNF692Q9BU19 519 aaPredicted RBP15.23■□□□□ 0.03
TP53-227ENST00000622645 IPO8O15397 1037 aaKnown RBP15.22■□□□□ 0.03
TP53-227ENST00000622645 ALDH1L2Q3SY69 923 aa15.22■□□□□ 0.03
TP53-227ENST00000622645 TSPYL6Q8N831 410 aa15.22■□□□□ 0.03
TP53-227ENST00000622645 CDK12Q9NYV4 1490 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms