RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 CAVIN1Q6NZI2 390 aaKnown RBP27.1■■□□□ 1.93
PCSK6-220ENST00000622483 CFAP74Q9C0B2 1584 aa27.1■■□□□ 1.93
PCSK6-220ENST00000622483 RAB3GAP1Q15042 981 aa27.09■■□□□ 1.93
PCSK6-220ENST00000622483 TCP11L2Q8N4U5 519 aa27.09■■□□□ 1.93
PCSK6-220ENST00000622483 ISY1Q9ULR0 285 aaKnown RBP27.09■■□□□ 1.93
PCSK6-220ENST00000622483 PTPRTO14522 1441 aa27.09■■□□□ 1.93
PCSK6-220ENST00000622483 RICTORQ6R327 1708 aa27.09■■□□□ 1.93
PCSK6-220ENST00000622483 TSR2Q969E8 191 aaKnown RBP27.08■■□□□ 1.93
PCSK6-220ENST00000622483 GPRASP1Q5JY77 1395 aa27.07■■□□□ 1.92
PCSK6-220ENST00000622483 DDIT3P35638 169 aa27.07■■□□□ 1.92
PCSK6-220ENST00000622483 TSC1Q92574 1164 aa27.07■■□□□ 1.92
PCSK6-220ENST00000622483 CHAMP1Q96JM3 812 aa27.07■■□□□ 1.92
PCSK6-220ENST00000622483 MVPQ14764 893 aaKnown RBP27.07■■□□□ 1.92
PCSK6-220ENST00000622483 MCTP1Q6DN14 999 aa27.06■■□□□ 1.92
PCSK6-220ENST00000622483 PPP1R9BQ96SB3 815 aa27.05■■□□□ 1.92
PCSK6-220ENST00000622483 GAS2L2Q8NHY3 880 aa27.04■■□□□ 1.92
PCSK6-220ENST00000622483 ABCC3O15438 1527 aa27.04■■□□□ 1.92
PCSK6-220ENST00000622483 EFCAB6Q5THR3 1501 aa27.04■■□□□ 1.92
PCSK6-220ENST00000622483 TET3O43151 1660 aa27.04■■□□□ 1.92
PCSK6-220ENST00000622483 TRPM2O94759 1503 aa27.04■■□□□ 1.92
PCSK6-220ENST00000622483 DEPDC5O75140 1603 aa27.03■■□□□ 1.92
PCSK6-220ENST00000622483 SKOR2Q2VWA4 1001 aaPredicted RBP27.03■■□□□ 1.92
PCSK6-220ENST00000622483 GLI2P10070 1586 aa27.03■■□□□ 1.92
PCSK6-220ENST00000622483 AAMPQ13685 434 aa27.03■■□□□ 1.92
PCSK6-220ENST00000622483 DZIP1LQ8IYY4 767 aaKnown RBP27.03■■□□□ 1.92
PCSK6-220ENST00000622483 RBM27Q9P2N5 1060 aaKnown RBP27.03■■□□□ 1.92
PCSK6-220ENST00000622483 SPHKAPQ2M3C7 1700 aa27.02■■□□□ 1.92
PCSK6-220ENST00000622483 SMC5Q8IY18 1101 aa27.02■■□□□ 1.92
PCSK6-220ENST00000622483 CARD14Q9BXL6 1004 aa27.01■■□□□ 1.91
PCSK6-220ENST00000622483 RBSNQ9H1K0 784 aa27.01■■□□□ 1.91
PCSK6-220ENST00000622483 FOXD4L5Q5VV16 416 aaPredicted RBP27.01■■□□□ 1.91
PCSK6-220ENST00000622483 FOXD4L4Q8WXT5 416 aaPredicted RBP27.01■■□□□ 1.91
PCSK6-220ENST00000622483 SMC4Q9NTJ3 1288 aa27.01■■□□□ 1.91
PCSK6-220ENST00000622483 KIF13AQ9H1H9 1805 aa27■■□□□ 1.91
PCSK6-220ENST00000622483 FAM177BA6PVY3 158 aa27■■□□□ 1.91
PCSK6-220ENST00000622483 GOLGA6L22H0YM25 854 aa27■■□□□ 1.91
PCSK6-220ENST00000622483 VWDEQ8N2E2 1590 aa27■■□□□ 1.91
PCSK6-220ENST00000622483 RNF214Q8ND24 703 aa26.99■■□□□ 1.91
PCSK6-220ENST00000622483 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.99■■□□□ 1.91
PCSK6-220ENST00000622483 AK9Q5TCS8 1911 aa26.99■■□□□ 1.91
PCSK6-220ENST00000622483 ZKSCAN2Q63HK3 967 aa26.99■■□□□ 1.91
PCSK6-220ENST00000622483 PIK3C2GO75747 1445 aa26.98■■□□□ 1.91
PCSK6-220ENST00000622483 PKP1Q13835 747 aa26.98■■□□□ 1.91
PCSK6-220ENST00000622483 BAG4O95429 457 aaKnown RBP26.98■■□□□ 1.91
PCSK6-220ENST00000622483 PRIM1P49642 420 aaKnown RBP26.97■■□□□ 1.91
PCSK6-220ENST00000622483 ASXL1Q8IXJ9 1541 aa26.97■■□□□ 1.91
PCSK6-220ENST00000622483 NINLQ9Y2I6 1382 aa26.97■■□□□ 1.91
PCSK6-220ENST00000622483 RNF17Q9BXT8 1623 aaKnown RBP26.96■■□□□ 1.91
PCSK6-220ENST00000622483 TRIM27P14373 513 aa26.95■■□□□ 1.91
PCSK6-220ENST00000622483 KIF2CQ99661 725 aa26.95■■□□□ 1.91
PCSK6-220ENST00000622483 ZSCAN23Q3MJ62 389 aa26.94■■□□□ 1.9
PCSK6-220ENST00000622483 TPRNQ4KMQ1 711 aa26.94■■□□□ 1.9
PCSK6-220ENST00000622483 K7ELQ4 463 aaPredicted RBP26.94■■□□□ 1.9
PCSK6-220ENST00000622483 SIGLEC1Q9BZZ2 1709 aa26.94■■□□□ 1.9
PCSK6-220ENST00000622483 RBM25P49756 843 aaKnown RBP26.92■■□□□ 1.9
PCSK6-220ENST00000622483 EIF2AK4Q9P2K8 1649 aaKnown RBP26.92■■□□□ 1.9
PCSK6-220ENST00000622483 KLHL40Q2TBA0 621 aa26.92■■□□□ 1.9
PCSK6-220ENST00000622483 CDCA8Q53HL2 280 aa26.92■■□□□ 1.9
PCSK6-220ENST00000622483 DNTTIP2Q5QJE6 756 aaKnown RBP26.92■■□□□ 1.9
PCSK6-220ENST00000622483 SNX21Q969T3 373 aa26.92■■□□□ 1.9
PCSK6-220ENST00000622483 NCOA3Q9Y6Q9 1424 aa26.92■■□□□ 1.9
PCSK6-220ENST00000622483 C1orf115Q9H7X2 142 aa26.92■■□□□ 1.9
PCSK6-220ENST00000622483 NOL7Q9UMY1 257 aaKnown RBP26.91■■□□□ 1.9
PCSK6-220ENST00000622483 RUNDC1Q96C34 613 aa26.91■■□□□ 1.9
PCSK6-220ENST00000622483 CIZ1Q9ULV3 898 aaPredicted RBP26.91■■□□□ 1.9
PCSK6-220ENST00000622483 PRPF40AO75400 957 aaKnown RBP26.9■■□□□ 1.9
PCSK6-220ENST00000622483 MORC1Q86VD1 984 aa26.9■■□□□ 1.9
PCSK6-220ENST00000622483 TMEM57Q8N5G2 664 aa26.9■■□□□ 1.9
PCSK6-220ENST00000622483 CBX1P83916 185 aa26.9■■□□□ 1.9
PCSK6-220ENST00000622483 EXOSC9Q06265 439 aaKnown RBP26.9■■□□□ 1.9
PCSK6-220ENST00000622483 ANKRD45Q5TZF3 282 aa26.89■■□□□ 1.9
PCSK6-220ENST00000622483 MROH2AA6NES4 1674 aa26.88■■□□□ 1.89
PCSK6-220ENST00000622483 NOB1Q9ULX3 412 aaKnown RBP26.88■■□□□ 1.89
PCSK6-220ENST00000622483 SSH1Q8WYL5 1049 aa26.88■■□□□ 1.89
PCSK6-220ENST00000622483 MAP7D2Q96T17 732 aa26.88■■□□□ 1.89
PCSK6-220ENST00000622483 VGFO15240 615 aaPredicted RBP26.87■■□□□ 1.89
PCSK6-220ENST00000622483 ZMYM3Q14202 1370 aa26.87■■□□□ 1.89
PCSK6-220ENST00000622483 IGSF3O75054 1194 aa26.86■■□□□ 1.89
PCSK6-220ENST00000622483 SYCE3A1L190 88 aa26.86■■□□□ 1.89
PCSK6-220ENST00000622483 U2AF1L5P0DN76 240 aaPredicted RBP26.86■■□□□ 1.89
PCSK6-220ENST00000622483 U2AF1Q01081 240 aaKnown RBP eCLIP26.86■■□□□ 1.89
PCSK6-220ENST00000622483 SLC52A1Q9NWF4 448 aa26.86■■□□□ 1.89
PCSK6-220ENST00000622483 PTMAP06454 111 aaKnown RBP26.85■■□□□ 1.89
PCSK6-220ENST00000622483 DNAJC5Q9H3Z4 198 aa26.85■■□□□ 1.89
PCSK6-220ENST00000622483 MINK1Q8N4C8 1332 aaPredicted RBP26.85■■□□□ 1.89
PCSK6-220ENST00000622483 FOXD4L6Q3SYB3 417 aaPredicted RBP26.85■■□□□ 1.89
PCSK6-220ENST00000622483 FOXD4L3Q6VB84 417 aaPredicted RBP26.85■■□□□ 1.89
PCSK6-220ENST00000622483 SMAP1Q8IYB5 467 aaPredicted RBP26.85■■□□□ 1.89
PCSK6-220ENST00000622483 ZNF830Q96NB3 372 aaPredicted RBP26.84■■□□□ 1.89
PCSK6-220ENST00000622483 ZKSCAN5Q9Y2L8 839 aa26.84■■□□□ 1.89
PCSK6-220ENST00000622483 MTHFSP49914 203 aa26.83■■□□□ 1.89
PCSK6-220ENST00000622483 TBC1D9Q6ZT07 1266 aa26.83■■□□□ 1.89
PCSK6-220ENST00000622483 CABP2Q9NPB3 220 aa26.83■■□□□ 1.89
PCSK6-220ENST00000622483 NSFL1CQ9UNZ2 370 aaKnown RBP26.83■■□□□ 1.89
PCSK6-220ENST00000622483 CAMSAP1Q5T5Y3 1602 aa26.83■■□□□ 1.89
PCSK6-220ENST00000622483 SLC12A5Q9H2X9 1139 aa26.83■■□□□ 1.88
PCSK6-220ENST00000622483 NUTM2FA1L443 756 aa26.82■■□□□ 1.88
PCSK6-220ENST00000622483 C14orf93Q9H972 538 aaKnown RBP26.82■■□□□ 1.88
PCSK6-220ENST00000622483 SYNMO15061 1565 aa26.82■■□□□ 1.88
PCSK6-220ENST00000622483 ZNF500O60304 480 aaPredicted RBP26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms