RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 TNNT1P13805 278 aa11.85□□□□□ -0.51
COL4A6-210ENST00000621266 ENOX2Q16206 610 aaKnown RBP11.85□□□□□ -0.51
COL4A6-210ENST00000621266 PDCL2Q8N4E4 241 aa11.85□□□□□ -0.51
COL4A6-210ENST00000621266 AFAP1Q8N556 730 aa11.85□□□□□ -0.51
COL4A6-210ENST00000621266 CCP110O43303 1012 aa11.84□□□□□ -0.51
COL4A6-210ENST00000621266 OFD1O75665 1012 aa11.84□□□□□ -0.51
COL4A6-210ENST00000621266 NLRP2Q9NX02 1062 aa11.84□□□□□ -0.51
COL4A6-210ENST00000621266 ANKRD62A6NC57 917 aa11.84□□□□□ -0.51
COL4A6-210ENST00000621266 NFXL1Q6ZNB6 911 aa11.84□□□□□ -0.51
COL4A6-210ENST00000621266 CASKIN1Q8WXD9 1431 aa11.84□□□□□ -0.51
COL4A6-210ENST00000621266 FAM177BA6PVY3 158 aa11.84□□□□□ -0.51
COL4A6-210ENST00000621266 ZMYND15Q9H091 742 aa11.84□□□□□ -0.51
COL4A6-210ENST00000621266 INCENPQ9NQS7 918 aa11.84□□□□□ -0.51
COL4A6-210ENST00000621266 UBE2Q2Q8WVN8 375 aa11.84□□□□□ -0.51
COL4A6-210ENST00000621266 E9PSI1 815 aa11.83□□□□□ -0.52
COL4A6-210ENST00000621266 EPS15P42566 896 aa11.83□□□□□ -0.52
COL4A6-210ENST00000621266 TRIM34Q9BYJ4 488 aa11.83□□□□□ -0.52
COL4A6-210ENST00000621266 TCEAL9Q9UHQ7 104 aa11.83□□□□□ -0.52
COL4A6-210ENST00000621266 KIF21BO75037 1637 aa11.83□□□□□ -0.52
COL4A6-210ENST00000621266 NEXNQ0ZGT2 675 aa11.83□□□□□ -0.52
COL4A6-210ENST00000621266 LNPKQ9C0E8 428 aa11.83□□□□□ -0.52
COL4A6-210ENST00000621266 SAMD1Q6SPF0 538 aaPredicted RBP11.83□□□□□ -0.52
COL4A6-210ENST00000621266 CCDC102AQ96A19 550 aa11.83□□□□□ -0.52
COL4A6-210ENST00000621266 LRRC9Q6ZRR7 1453 aa11.83□□□□□ -0.52
COL4A6-210ENST00000621266 EIF3JO75822 258 aaKnown RBP11.83□□□□□ -0.52
COL4A6-210ENST00000621266 XPCQ01831 940 aaPredicted RBP11.83□□□□□ -0.52
COL4A6-210ENST00000621266 PRKRIP1Q9H875 184 aaPredicted RBP11.83□□□□□ -0.52
COL4A6-210ENST00000621266 TAX1BP1Q86VP1 789 aa11.82□□□□□ -0.52
COL4A6-210ENST00000621266 FYCO1Q9BQS8 1478 aa11.82□□□□□ -0.52
COL4A6-210ENST00000621266 ESPNB1AK53 854 aa11.82□□□□□ -0.52
COL4A6-210ENST00000621266 IFT140Q96RY7 1462 aa11.82□□□□□ -0.52
COL4A6-210ENST00000621266 TMEM132EQ6IEE7 984 aa11.82□□□□□ -0.52
COL4A6-210ENST00000621266 CLASRPQ8N2M8 674 aaKnown RBP11.81□□□□□ -0.52
COL4A6-210ENST00000621266 ZNF526Q8TF50 670 aaPredicted RBP11.81□□□□□ -0.52
COL4A6-210ENST00000621266 ANKRD50Q9ULJ7 1429 aa11.81□□□□□ -0.52
COL4A6-210ENST00000621266 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.81□□□□□ -0.52
COL4A6-210ENST00000621266 SMARCE1Q969G3 411 aa11.81□□□□□ -0.52
COL4A6-210ENST00000621266 DDX19BQ9UMR2 479 aa11.81□□□□□ -0.52
COL4A6-210ENST00000621266 TEFQ10587 303 aa11.81□□□□□ -0.52
COL4A6-210ENST00000621266 RNF20Q5VTR2 975 aa11.81□□□□□ -0.52
COL4A6-210ENST00000621266 DHX16O60231 1041 aaKnown RBP11.8□□□□□ -0.52
COL4A6-210ENST00000621266 NCOA2Q15596 1464 aa11.8□□□□□ -0.52
COL4A6-210ENST00000621266 IFIT2P09913 472 aaKnown RBP11.8□□□□□ -0.52
COL4A6-210ENST00000621266 ERLIN1O75477 346 aa11.8□□□□□ -0.52
COL4A6-210ENST00000621266 MBD3O95983 291 aa11.8□□□□□ -0.52
COL4A6-210ENST00000621266 CABP2Q9NPB3 220 aa11.8□□□□□ -0.52
COL4A6-210ENST00000621266 ABTB2Q8N961 1025 aa11.79□□□□□ -0.52
COL4A6-210ENST00000621266 LRRCC1Q9C099 1032 aa11.79□□□□□ -0.52
COL4A6-210ENST00000621266 ERICH3Q5RHP9 1530 aa11.79□□□□□ -0.52
COL4A6-210ENST00000621266 SYNJ2O15056 1496 aa11.79□□□□□ -0.52
COL4A6-210ENST00000621266 FIBPO43427 364 aa11.79□□□□□ -0.52
COL4A6-210ENST00000621266 SEPT7Q16181 437 aaKnown RBP11.79□□□□□ -0.52
COL4A6-210ENST00000621266 DZIP1LQ8IYY4 767 aaKnown RBP11.79□□□□□ -0.52
COL4A6-210ENST00000621266 CTDP1Q9Y5B0 961 aaPredicted RBP11.79□□□□□ -0.52
COL4A6-210ENST00000621266 RBM42Q9BTD8 480 aaKnown RBP11.79□□□□□ -0.52
COL4A6-210ENST00000621266 CEBPZQ03701 1054 aaKnown RBP11.79□□□□□ -0.52
COL4A6-210ENST00000621266 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.79□□□□□ -0.52
COL4A6-210ENST00000621266 ERLIN2O94905 339 aa11.78□□□□□ -0.52
COL4A6-210ENST00000621266 TRDNQ13061 729 aa11.78□□□□□ -0.52
COL4A6-210ENST00000621266 CCDC181Q5TID7 509 aa11.78□□□□□ -0.52
COL4A6-210ENST00000621266 KINO60870 393 aaKnown RBP11.78□□□□□ -0.52
COL4A6-210ENST00000621266 SERPINC1P01008 464 aa11.78□□□□□ -0.52
COL4A6-210ENST00000621266 SAFBQ15424 915 aaKnown RBP eCLIP11.78□□□□□ -0.52
COL4A6-210ENST00000621266 VPS37DQ86XT2 251 aa11.78□□□□□ -0.52
COL4A6-210ENST00000621266 RAPGEF4Q8WZA2 1011 aa11.78□□□□□ -0.52
COL4A6-210ENST00000621266 ANKLE2Q86XL3 938 aa11.77□□□□□ -0.52
COL4A6-210ENST00000621266 FILIP1LQ4L180 1135 aa11.77□□□□□ -0.52
COL4A6-210ENST00000621266 RBM33Q96EV2 1170 aaKnown RBP11.77□□□□□ -0.53
COL4A6-210ENST00000621266 APAF1O14727 1248 aa11.77□□□□□ -0.53
COL4A6-210ENST00000621266 BBXQ8WY36 941 aaPredicted RBP11.77□□□□□ -0.53
COL4A6-210ENST00000621266 THEMISQ8N1K5 641 aaPredicted RBP11.76□□□□□ -0.53
COL4A6-210ENST00000621266 ZNF428Q96B54 188 aa11.76□□□□□ -0.53
COL4A6-210ENST00000621266 DIAPH1O60610 1272 aaKnown RBP11.76□□□□□ -0.53
COL4A6-210ENST00000621266 CDC45O75419 566 aa11.76□□□□□ -0.53
COL4A6-210ENST00000621266 ADAMTS2O95450 1211 aa11.76□□□□□ -0.53
COL4A6-210ENST00000621266 PANK1Q8TE04 598 aa11.76□□□□□ -0.53
COL4A6-210ENST00000621266 DDX54Q8TDD1 881 aaKnown RBP11.76□□□□□ -0.53
COL4A6-210ENST00000621266 SLC26A8Q96RN1 970 aa11.76□□□□□ -0.53
COL4A6-210ENST00000621266 CALCOCO1Q9P1Z2 691 aa11.76□□□□□ -0.53
COL4A6-210ENST00000621266 ERICH2A1L162 156 aa11.76□□□□□ -0.53
COL4A6-210ENST00000621266 POLR3GO15318 223 aaPredicted RBP11.76□□□□□ -0.53
COL4A6-210ENST00000621266 ZFP91Q96JP5 570 aaPredicted RBP11.76□□□□□ -0.53
COL4A6-210ENST00000621266 GPRASP1Q5JY77 1395 aa11.75□□□□□ -0.53
COL4A6-210ENST00000621266 CCAR1Q8IX12 1150 aaKnown RBP11.75□□□□□ -0.53
COL4A6-210ENST00000621266 HMGXB3Q12766 1538 aa11.75□□□□□ -0.53
COL4A6-210ENST00000621266 MAGEC2Q9UBF1 373 aaPredicted RBP11.75□□□□□ -0.53
COL4A6-210ENST00000621266 GOLGA6L10A0A0M3HER8 536 aa11.75□□□□□ -0.53
COL4A6-210ENST00000621266 NLRP6P59044 892 aa11.75□□□□□ -0.53
COL4A6-210ENST00000621266 C9orf78Q9NZ63 289 aaPredicted RBP11.75□□□□□ -0.53
COL4A6-210ENST00000621266 CCDC192P0DO97 292 aa11.75□□□□□ -0.53
COL4A6-210ENST00000621266 LRRFIP1Q32MZ4 808 aaKnown RBP11.75□□□□□ -0.53
COL4A6-210ENST00000621266 POGZQ7Z3K3 1410 aa11.75□□□□□ -0.53
COL4A6-210ENST00000621266 CNKSR2Q8WXI2 1034 aa11.75□□□□□ -0.53
COL4A6-210ENST00000621266 CCDC43Q96MW1 224 aaKnown RBP11.75□□□□□ -0.53
COL4A6-210ENST00000621266 AIMP1Q12904 312 aaKnown RBP11.74□□□□□ -0.53
COL4A6-210ENST00000621266 NOL10Q9BSC4 688 aaKnown RBP11.74□□□□□ -0.53
COL4A6-210ENST00000621266 TOM1L2Q6ZVM7 507 aa11.74□□□□□ -0.53
COL4A6-210ENST00000621266 PDCL3Q9H2J4 239 aa11.74□□□□□ -0.53
COL4A6-210ENST00000621266 LRRFIP2Q9Y608 721 aaKnown RBP11.74□□□□□ -0.53
COL4A6-210ENST00000621266 SYNJ1O43426 1573 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms