RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 IPO4Q8TEX9 1081 aaKnown RBP13.45□□□□□ -0.26
CDH1-214ENST00000621016 LNPKQ9C0E8 428 aa13.45□□□□□ -0.26
CDH1-214ENST00000621016 NPC1L1Q9UHC9 1359 aa13.45□□□□□ -0.26
CDH1-214ENST00000621016 FYB1O15117 783 aa13.44□□□□□ -0.26
CDH1-214ENST00000621016 WDR63Q8IWG1 891 aa13.44□□□□□ -0.26
CDH1-214ENST00000621016 FOXD4L1Q9NU39 408 aa13.44□□□□□ -0.26
CDH1-214ENST00000621016 SPHKAPQ2M3C7 1700 aa13.44□□□□□ -0.26
CDH1-214ENST00000621016 HAP1P54257 671 aaPredicted RBP13.44□□□□□ -0.26
CDH1-214ENST00000621016 MVPQ14764 893 aaKnown RBP13.44□□□□□ -0.26
CDH1-214ENST00000621016 CDK19Q9BWU1 502 aa13.44□□□□□ -0.26
CDH1-214ENST00000621016 USP19O94966 1318 aa13.43□□□□□ -0.26
CDH1-214ENST00000621016 ERBB4Q15303 1308 aa13.43□□□□□ -0.26
CDH1-214ENST00000621016 NCKAP5LQ9HCH0 1330 aa13.43□□□□□ -0.26
CDH1-214ENST00000621016 SHROOM2Q13796 1616 aa13.43□□□□□ -0.26
CDH1-214ENST00000621016 APBB1O00213 710 aa13.43□□□□□ -0.26
CDH1-214ENST00000621016 TMEM57Q8N5G2 664 aa13.43□□□□□ -0.26
CDH1-214ENST00000621016 TERF2IPQ9NYB0 399 aa13.43□□□□□ -0.26
CDH1-214ENST00000621016 ZRANB1Q9UGI0 708 aa13.43□□□□□ -0.26
CDH1-214ENST00000621016 DIAPH1O60610 1272 aaKnown RBP13.43□□□□□ -0.26
CDH1-214ENST00000621016 PRKAR2BP31323 418 aa13.43□□□□□ -0.26
CDH1-214ENST00000621016 L1TD1Q5T7N2 865 aaKnown RBP13.43□□□□□ -0.26
CDH1-214ENST00000621016 KDM5AP29375 1690 aaKnown RBP13.43□□□□□ -0.26
CDH1-214ENST00000621016 IQGAP1P46940 1657 aa13.42□□□□□ -0.26
CDH1-214ENST00000621016 LAMC1P11047 1609 aa13.42□□□□□ -0.26
CDH1-214ENST00000621016 RNF17Q9BXT8 1623 aaKnown RBP13.42□□□□□ -0.26
CDH1-214ENST00000621016 ABCA6Q8N139 1617 aa13.42□□□□□ -0.26
CDH1-214ENST00000621016 GOLGA6L3A6NEY3 463 aa13.42□□□□□ -0.26
CDH1-214ENST00000621016 ESPNB1AK53 854 aa13.42□□□□□ -0.26
CDH1-214ENST00000621016 IGSF3O75054 1194 aa13.41□□□□□ -0.26
CDH1-214ENST00000621016 HDGFL2Q7Z4V5 671 aaPredicted RBP13.41□□□□□ -0.26
CDH1-214ENST00000621016 A0A1W2PP64 1363 aa13.41□□□□□ -0.26
CDH1-214ENST00000621016 TRIM35Q9UPQ4 493 aa13.41□□□□□ -0.26
CDH1-214ENST00000621016 DCTN1Q14203 1278 aa13.41□□□□□ -0.26
CDH1-214ENST00000621016 UHRF1BP1LA0JNW5 1464 aa13.4□□□□□ -0.26
CDH1-214ENST00000621016 TRIM44Q96DX7 344 aaPredicted RBP13.4□□□□□ -0.26
CDH1-214ENST00000621016 RRS1Q15050 365 aaKnown RBP13.4□□□□□ -0.26
CDH1-214ENST00000621016 TBC1D2Q9BYX2 928 aa13.4□□□□□ -0.26
CDH1-214ENST00000621016 EMILIN1Q9Y6C2 1016 aa13.4□□□□□ -0.26
CDH1-214ENST00000621016 PHACTR3Q96KR7 559 aa13.39□□□□□ -0.27
CDH1-214ENST00000621016 MAP3K4Q9Y6R4 1608 aa13.39□□□□□ -0.27
CDH1-214ENST00000621016 ATF7IPQ6VMQ6 1270 aa13.39□□□□□ -0.27
CDH1-214ENST00000621016 AEBP1Q8IUX7 1158 aa13.39□□□□□ -0.27
CDH1-214ENST00000621016 NGEFQ8N5V2 710 aa13.39□□□□□ -0.27
CDH1-214ENST00000621016 TET3O43151 1660 aa13.39□□□□□ -0.27
CDH1-214ENST00000621016 SECISBP2LQ93073 1101 aaKnown RBP13.39□□□□□ -0.27
CDH1-214ENST00000621016 ANKRD45Q5TZF3 282 aa13.38□□□□□ -0.27
CDH1-214ENST00000621016 ZNF518AQ6AHZ1 1483 aa13.38□□□□□ -0.27
CDH1-214ENST00000621016 TXNDC2Q86VQ3 553 aa13.38□□□□□ -0.27
CDH1-214ENST00000621016 TMEM51Q9NW97 253 aa13.38□□□□□ -0.27
CDH1-214ENST00000621016 FAM83GA6ND36 823 aa13.38□□□□□ -0.27
CDH1-214ENST00000621016 CDK11BP21127 795 aaKnown RBP13.38□□□□□ -0.27
CDH1-214ENST00000621016 MYOM1P52179 1685 aa13.37□□□□□ -0.27
CDH1-214ENST00000621016 PPP4R3BQ5MIZ7 849 aa13.37□□□□□ -0.27
CDH1-214ENST00000621016 TSPYL6Q8N831 410 aa13.37□□□□□ -0.27
CDH1-214ENST00000621016 C22orf23Q9BZE7 217 aa13.37□□□□□ -0.27
CDH1-214ENST00000621016 NME9Q86XW9 330 aa13.37□□□□□ -0.27
CDH1-214ENST00000621016 R3HCC1Q9Y3T6 440 aaKnown RBP13.37□□□□□ -0.27
CDH1-214ENST00000621016 CEP152O94986 1710 aa13.37□□□□□ -0.27
CDH1-214ENST00000621016 ZBTB9Q96C00 473 aa13.36□□□□□ -0.27
CDH1-214ENST00000621016 ANKRD36BQ8N2N9 1353 aa13.36□□□□□ -0.27
CDH1-214ENST00000621016 DDX19BQ9UMR2 479 aa13.36□□□□□ -0.27
CDH1-214ENST00000621016 PPRC1Q5VV67 1664 aaKnown RBP13.35□□□□□ -0.27
CDH1-214ENST00000621016 RPGRIP1LQ68CZ1 1315 aa13.35□□□□□ -0.27
CDH1-214ENST00000621016 EFCAB6Q5THR3 1501 aa13.35□□□□□ -0.27
CDH1-214ENST00000621016 TPM2P07951 284 aa13.35□□□□□ -0.27
CDH1-214ENST00000621016 FAM69CQ0P6D2 419 aa13.35□□□□□ -0.27
CDH1-214ENST00000621016 CLASP1Q7Z460 1538 aa13.35□□□□□ -0.27
CDH1-214ENST00000621016 MYOM2P54296 1465 aa13.34□□□□□ -0.27
CDH1-214ENST00000621016 TBC1D32Q96NH3 1257 aa13.34□□□□□ -0.27
CDH1-214ENST00000621016 PLEKHF1Q96S99 279 aa13.34□□□□□ -0.27
CDH1-214ENST00000621016 PHF23Q9BUL5 403 aaPredicted RBP13.34□□□□□ -0.27
CDH1-214ENST00000621016 MROH2AA6NES4 1674 aa13.34□□□□□ -0.27
CDH1-214ENST00000621016 KIF1BO60333 1816 aa13.33□□□□□ -0.28
CDH1-214ENST00000621016 DNTTIP2Q5QJE6 756 aaKnown RBP13.33□□□□□ -0.28
CDH1-214ENST00000621016 IPO8O15397 1037 aaKnown RBP13.33□□□□□ -0.28
CDH1-214ENST00000621016 KRT24Q2M2I5 525 aa13.33□□□□□ -0.28
CDH1-214ENST00000621016 ESF1Q9H501 851 aaKnown RBP13.33□□□□□ -0.28
CDH1-214ENST00000621016 POLKQ9UBT6 870 aa13.33□□□□□ -0.28
CDH1-214ENST00000621016 ATAD2Q6PL18 1390 aa13.32□□□□□ -0.28
CDH1-214ENST00000621016 SBNO2Q9Y2G9 1366 aa13.32□□□□□ -0.28
CDH1-214ENST00000621016 YEATS2Q9ULM3 1422 aa13.32□□□□□ -0.28
CDH1-214ENST00000621016 CCDC27Q2M243 656 aa13.32□□□□□ -0.28
CDH1-214ENST00000621016 SLC52A1Q9NWF4 448 aa13.32□□□□□ -0.28
CDH1-214ENST00000621016 INO80Q9ULG1 1556 aaPredicted RBP13.31□□□□□ -0.28
CDH1-214ENST00000621016 MROH1Q8NDA8 1641 aa13.31□□□□□ -0.28
CDH1-214ENST00000621016 MIS18AQ9NYP9 233 aa13.31□□□□□ -0.28
CDH1-214ENST00000621016 POGZQ7Z3K3 1410 aa13.31□□□□□ -0.28
CDH1-214ENST00000621016 KIDINS220Q9ULH0 1771 aa13.3□□□□□ -0.28
CDH1-214ENST00000621016 CBX1P83916 185 aa13.3□□□□□ -0.28
CDH1-214ENST00000621016 CGNQ9P2M7 1197 aaKnown RBP13.3□□□□□ -0.28
CDH1-214ENST00000621016 CHMP4CQ96CF2 233 aa13.3□□□□□ -0.28
CDH1-214ENST00000621016 HSCBQ8IWL3 235 aa13.29□□□□□ -0.28
CDH1-214ENST00000621016 RBM42Q9BTD8 480 aaKnown RBP13.29□□□□□ -0.28
CDH1-214ENST00000621016 ZBTB40Q9NUA8 1239 aa13.29□□□□□ -0.28
CDH1-214ENST00000621016 NINLQ9Y2I6 1382 aa13.29□□□□□ -0.28
CDH1-214ENST00000621016 HSP90AB1P08238 724 aaKnown RBP13.29□□□□□ -0.28
CDH1-214ENST00000621016 C8orf58Q8NAV2 365 aa13.28□□□□□ -0.28
CDH1-214ENST00000621016 NECTIN2Q92692 538 aa13.28□□□□□ -0.28
CDH1-214ENST00000621016 VWDEQ8N2E2 1590 aa13.28□□□□□ -0.28
CDH1-214ENST00000621016 CHD1LQ86WJ1 897 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms