RNA–Protein interactions for RNA: ENST00000620739.4

TP53-226, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-226ENST00000620739 RSPH6AQ9H0K4 717 aa15.04■□□□□ -0
TP53-226ENST00000620739 ARHGAP23Q9P227 1491 aa15.04■□□□□ -0
TP53-226ENST00000620739 DLC1Q96QB1 1528 aa15.04■□□□□ -0
TP53-226ENST00000620739 TBX22Q9Y458 520 aa15.03■□□□□ -0
TP53-226ENST00000620739 PRR36Q9H6K5 1346 aa15.03■□□□□ -0
TP53-226ENST00000620739 SLIT1O75093 1534 aa15.02■□□□□ -0
TP53-226ENST00000620739 HDGFL2Q7Z4V5 671 aaPredicted RBP15.02■□□□□ -0
TP53-226ENST00000620739 MED14O60244 1454 aa15.02□□□□□ -0.01
TP53-226ENST00000620739 KCNA6P17658 529 aa15.02□□□□□ -0.01
TP53-226ENST00000620739 ZRANB1Q9UGI0 708 aa15.02□□□□□ -0.01
TP53-226ENST00000620739 TECPR2O15040 1411 aa15.01□□□□□ -0.01
TP53-226ENST00000620739 SIRT1Q96EB6 747 aa15.01□□□□□ -0.01
TP53-226ENST00000620739 FAM135BQ49AJ0 1406 aa15.01□□□□□ -0.01
TP53-226ENST00000620739 PIAS4Q8N2W9 510 aaPredicted RBP15□□□□□ -0.01
TP53-226ENST00000620739 CCDC61Q9Y6R9 512 aa15□□□□□ -0.01
TP53-226ENST00000620739 NUDCQ9Y266 331 aa15□□□□□ -0.01
TP53-226ENST00000620739 ANKLE2Q86XL3 938 aa14.99□□□□□ -0.01
TP53-226ENST00000620739 PPIP5K1Q6PFW1 1433 aa14.99□□□□□ -0.01
TP53-226ENST00000620739 APAF1O14727 1248 aa14.99□□□□□ -0.01
TP53-226ENST00000620739 ATXN8OSP0DMR3 200 aa14.99□□□□□ -0.01
TP53-226ENST00000620739 PAXIP1Q6ZW49 1069 aaPredicted RBP14.99□□□□□ -0.01
TP53-226ENST00000620739 CEP170BQ9Y4F5 1589 aaPredicted RBP14.99□□□□□ -0.01
TP53-226ENST00000620739 NINLQ9Y2I6 1382 aa14.99□□□□□ -0.01
TP53-226ENST00000620739 BLMP54132 1417 aaPredicted RBP14.98□□□□□ -0.01
TP53-226ENST00000620739 NME9Q86XW9 330 aa14.98□□□□□ -0.01
TP53-226ENST00000620739 ADAMTSL3P82987 1691 aa14.97□□□□□ -0.01
TP53-226ENST00000620739 PPM1GO15355 546 aaPredicted RBP14.97□□□□□ -0.01
TP53-226ENST00000620739 SMG6Q86US8 1419 aaKnown RBP14.97□□□□□ -0.01
TP53-226ENST00000620739 PMFBP1Q8TBY8 1022 aa14.96□□□□□ -0.01
TP53-226ENST00000620739 CPS1P31327 1500 aa14.96□□□□□ -0.02
TP53-226ENST00000620739 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.95□□□□□ -0.02
TP53-226ENST00000620739 CFAP44Q96MT7 982 aa14.95□□□□□ -0.02
TP53-226ENST00000620739 POLR3AO14802 1390 aaPredicted RBP14.95□□□□□ -0.02
TP53-226ENST00000620739 NEUROD2Q15784 382 aa14.95□□□□□ -0.02
TP53-226ENST00000620739 RRP7AQ9Y3A4 280 aaKnown RBP14.94□□□□□ -0.02
TP53-226ENST00000620739 CPSF1Q10570 1443 aaKnown RBP14.93□□□□□ -0.02
TP53-226ENST00000620739 ACEP12821 1306 aa14.93□□□□□ -0.02
TP53-226ENST00000620739 BRD2P25440 801 aaKnown RBP14.93□□□□□ -0.02
TP53-226ENST00000620739 NSD2O96028 1365 aa14.93□□□□□ -0.02
TP53-226ENST00000620739 ATP7BP35670 1465 aa14.92□□□□□ -0.02
TP53-226ENST00000620739 NPM2Q86SE8 214 aaKnown RBP14.92□□□□□ -0.02
TP53-226ENST00000620739 SPINK5Q9NQ38 1064 aaPredicted RBP14.92□□□□□ -0.02
TP53-226ENST00000620739 DMRT2Q9Y5R5 561 aa14.92□□□□□ -0.02
TP53-226ENST00000620739 U2AF1L5P0DN76 240 aaPredicted RBP14.91□□□□□ -0.02
TP53-226ENST00000620739 U2AF1Q01081 240 aaKnown RBP eCLIP14.91□□□□□ -0.025e-7■■■■□ 23
TP53-226ENST00000620739 U2SURPO15042 1029 aaKnown RBP14.91□□□□□ -0.02
TP53-226ENST00000620739 CFAP53Q96M91 514 aa14.9□□□□□ -0.02
TP53-226ENST00000620739 EMILIN1Q9Y6C2 1016 aa14.9□□□□□ -0.02
TP53-226ENST00000620739 USP32Q8NFA0 1604 aa14.9□□□□□ -0.02
TP53-226ENST00000620739 KNDC1Q76NI1 1749 aa14.9□□□□□ -0.02
TP53-226ENST00000620739 SAMD1Q6SPF0 538 aaPredicted RBP14.9□□□□□ -0.02
TP53-226ENST00000620739 POLKQ9UBT6 870 aa14.9□□□□□ -0.02
TP53-226ENST00000620739 SOX12O15370 315 aa14.89□□□□□ -0.03
TP53-226ENST00000620739 RRS1Q15050 365 aaKnown RBP14.89□□□□□ -0.03
TP53-226ENST00000620739 HSPA2P54652 639 aa14.89□□□□□ -0.03
TP53-226ENST00000620739 INSRP06213 1382 aa14.89□□□□□ -0.03
TP53-226ENST00000620739 ZNF521Q96K83 1311 aa14.88□□□□□ -0.03
TP53-226ENST00000620739 PDE3BQ13370 1112 aa14.88□□□□□ -0.03
TP53-226ENST00000620739 NBR1Q14596 966 aa14.88□□□□□ -0.03
TP53-226ENST00000620739 TCP11L2Q8N4U5 519 aa14.87□□□□□ -0.03
TP53-226ENST00000620739 SETD1BQ9UPS6 1966 aaKnown RBP14.87□□□□□ -0.03
TP53-226ENST00000620739 EDC4Q6P2E9 1401 aaKnown RBP14.87□□□□□ -0.03
TP53-226ENST00000620739 PLEKHG3A1L390 1219 aa14.87□□□□□ -0.03
TP53-226ENST00000620739 ZNF692Q9BU19 519 aaPredicted RBP14.87□□□□□ -0.03
TP53-226ENST00000620739 NKTRP30414 1462 aaKnown RBP14.87□□□□□ -0.03
TP53-226ENST00000620739 PTCH1Q13635 1447 aa14.87□□□□□ -0.03
TP53-226ENST00000620739 NGDNQ8NEJ9 315 aaKnown RBP14.86□□□□□ -0.03
TP53-226ENST00000620739 RCAN3Q9UKA8 241 aa14.86□□□□□ -0.03
TP53-226ENST00000620739 TTC21BQ7Z4L5 1316 aa14.86□□□□□ -0.03
TP53-226ENST00000620739 COG3Q96JB2 828 aa14.86□□□□□ -0.03
TP53-226ENST00000620739 PLIN1O60240 522 aa14.85□□□□□ -0.03
TP53-226ENST00000620739 GOLGA2Q08379 1002 aa14.85□□□□□ -0.03
TP53-226ENST00000620739 DUSP27Q5VZP5 1158 aa14.85□□□□□ -0.03
TP53-226ENST00000620739 BBXQ8WY36 941 aaPredicted RBP14.85□□□□□ -0.03
TP53-226ENST00000620739 RUNDC1Q96C34 613 aa14.85□□□□□ -0.03
TP53-226ENST00000620739 NUTM2GQ5VZR2 741 aa14.84□□□□□ -0.03
TP53-226ENST00000620739 SHPRHQ149N8 1683 aa14.84□□□□□ -0.03
TP53-226ENST00000620739 DIAPH1O60610 1272 aaKnown RBP14.84□□□□□ -0.03
TP53-226ENST00000620739 SLC4A2P04920 1241 aa14.84□□□□□ -0.03
TP53-226ENST00000620739 WWC1Q8IX03 1113 aa14.84□□□□□ -0.03
TP53-226ENST00000620739 CDC42BPGQ6DT37 1551 aa14.84□□□□□ -0.03
TP53-226ENST00000620739 NPHP4O75161 1426 aaPredicted RBP14.84□□□□□ -0.03
TP53-226ENST00000620739 FANCIQ9NVI1 1328 aa14.83□□□□□ -0.04
TP53-226ENST00000620739 RNF123Q5XPI4 1314 aa14.83□□□□□ -0.04
TP53-226ENST00000620739 KDM4FA0A1W2PPD8 638 aa14.82□□□□□ -0.04
TP53-226ENST00000620739 SLFN5Q08AF3 891 aa14.82□□□□□ -0.04
TP53-226ENST00000620739 PIK3R4Q99570 1358 aa14.82□□□□□ -0.04
TP53-226ENST00000620739 HMOX1P09601 288 aa14.82□□□□□ -0.04
TP53-226ENST00000620739 B4GALNT3Q6L9W6 998 aa14.82□□□□□ -0.04
TP53-226ENST00000620739 DIP2AQ14689 1571 aa14.82□□□□□ -0.04
TP53-226ENST00000620739 ADGRB2O60241 1585 aa14.81□□□□□ -0.04
TP53-226ENST00000620739 USP6P35125 1406 aa14.81□□□□□ -0.04
TP53-226ENST00000620739 XRN1Q8IZH2 1706 aaKnown RBP14.81□□□□□ -0.04
TP53-226ENST00000620739 ZNF142P52746 1687 aaPredicted RBP14.81□□□□□ -0.04
TP53-226ENST00000620739 PNPLA6Q8IY17 1366 aa14.81□□□□□ -0.04
TP53-226ENST00000620739 PLEKHF1Q96S99 279 aa14.8□□□□□ -0.04
TP53-226ENST00000620739 COL3A1P02461 1466 aaPredicted RBP14.8□□□□□ -0.04
TP53-226ENST00000620739 PAK3O75914 559 aaPredicted RBP14.8□□□□□ -0.04
TP53-226ENST00000620739 RRP1P56182 461 aaKnown RBP14.8□□□□□ -0.04
TP53-226ENST00000620739 NAP1L5Q96NT1 182 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms