RNA–Protein interactions for RNA: ENST00000619831.4

DMD-229, Transcript of dystrophin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DMD, Length 13,734 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-229ENST00000619831 GTF3C6Q969F1 213 aa5.28□□□□□ -1.56
DMD-229ENST00000619831 UPF3BQ9BZI7 483 aaKnown RBP5.28□□□□□ -1.56
DMD-229ENST00000619831 SIL1Q9H173 461 aa5.28□□□□□ -1.56
DMD-229ENST00000619831 TNMDQ9H2S6 317 aa5.28□□□□□ -1.56
DMD-229ENST00000619831 U2AF2P26368 475 aaKnown RBP eCLIP5.28□□□□□ -1.564e-6■■□□□ 13.2
DMD-229ENST00000619831 NUTM1Q86Y26 1132 aa5.28□□□□□ -1.56
DMD-229ENST00000619831 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.28□□□□□ -1.56
DMD-229ENST00000619831 ZSCAN23Q3MJ62 389 aa5.28□□□□□ -1.56
DMD-229ENST00000619831 DUSP27Q5VZP5 1158 aa5.28□□□□□ -1.56
DMD-229ENST00000619831 CUX1P39880 1505 aa5.28□□□□□ -1.56
DMD-229ENST00000619831 SF3A3Q12874 501 aaKnown RBP eCLIP5.28□□□□□ -1.562e-7■■■■■ 43
DMD-229ENST00000619831 CCDC112Q8NEF3 446 aa5.28□□□□□ -1.56
DMD-229ENST00000619831 PRM3Q9NNZ6 103 aa5.28□□□□□ -1.56
DMD-229ENST00000619831 CCDC102AQ96A19 550 aa5.28□□□□□ -1.56
DMD-229ENST00000619831 TMEM57Q8N5G2 664 aa5.28□□□□□ -1.56
DMD-229ENST00000619831 HMMRO75330 724 aa5.27□□□□□ -1.57
DMD-229ENST00000619831 CCDC70Q6NSX1 233 aa5.27□□□□□ -1.57
DMD-229ENST00000619831 GPATCH3Q96I76 525 aa5.27□□□□□ -1.57
DMD-229ENST00000619831 INTS3Q68E01 1043 aaKnown RBP5.27□□□□□ -1.57
DMD-229ENST00000619831 CFAP43Q8NDM7 1665 aa5.27□□□□□ -1.57
DMD-229ENST00000619831 DHX8Q14562 1220 aaKnown RBP5.27□□□□□ -1.57
DMD-229ENST00000619831 DDX19BQ9UMR2 479 aa5.27□□□□□ -1.57
DMD-229ENST00000619831 ADCY5O95622 1261 aa5.27□□□□□ -1.57
DMD-229ENST00000619831 GIMAP6Q6P9H5 292 aa5.27□□□□□ -1.57
DMD-229ENST00000619831 BIN1O00499 593 aa5.27□□□□□ -1.57
DMD-229ENST00000619831 NUCB2P80303 420 aa5.27□□□□□ -1.57
DMD-229ENST00000619831 TCP11L2Q8N4U5 519 aa5.27□□□□□ -1.57
DMD-229ENST00000619831 WASHC2CQ9Y4E1 1318 aa5.27□□□□□ -1.57
DMD-229ENST00000619831 TERF1P54274 439 aa5.27□□□□□ -1.57
DMD-229ENST00000619831 RUNDC1Q96C34 613 aa5.27□□□□□ -1.57
DMD-229ENST00000619831 TOP2BQ02880 1626 aa5.27□□□□□ -1.57
DMD-229ENST00000619831 TIAM1Q13009 1591 aa5.27□□□□□ -1.57
DMD-229ENST00000619831 RNF187Q5TA31 235 aaPredicted RBP5.27□□□□□ -1.57
DMD-229ENST00000619831 LEKR1Q6ZMV7 388 aa5.27□□□□□ -1.57
DMD-229ENST00000619831 GPIHBP1Q8IV16 184 aa5.26□□□□□ -1.57
DMD-229ENST00000619831 CCDC83Q8IWF9 413 aa5.26□□□□□ -1.57
DMD-229ENST00000619831 RUFY1Q96T51 708 aa5.26□□□□□ -1.57
DMD-229ENST00000619831 CNPY2Q9Y2B0 182 aa5.26□□□□□ -1.57
DMD-229ENST00000619831 CHD1LQ86WJ1 897 aa5.26□□□□□ -1.57
DMD-229ENST00000619831 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.26□□□□□ -1.57
DMD-229ENST00000619831 FKBP15Q5T1M5 1219 aa5.26□□□□□ -1.57
DMD-229ENST00000619831 REC8O95072 547 aa5.26□□□□□ -1.57
DMD-229ENST00000619831 C8orf34Q49A92 452 aa5.26□□□□□ -1.57
DMD-229ENST00000619831 PRIM1P49642 420 aaKnown RBP5.26□□□□□ -1.57
DMD-229ENST00000619831 NFXL1Q6ZNB6 911 aa5.26□□□□□ -1.57
DMD-229ENST00000619831 IL1RAPL2Q9NP60 686 aa5.26□□□□□ -1.57
DMD-229ENST00000619831 SDF4Q9BRK5 362 aa5.26□□□□□ -1.57
DMD-229ENST00000619831 LRRC9Q6ZRR7 1453 aa5.26□□□□□ -1.57
DMD-229ENST00000619831 IFIT2P09913 472 aaKnown RBP5.26□□□□□ -1.57
DMD-229ENST00000619831 CSB-PGBD3P0DP91 1061 aa5.26□□□□□ -1.57
DMD-229ENST00000619831 PDE6BP35913 854 aa5.26□□□□□ -1.57
DMD-229ENST00000619831 DCTN1Q14203 1278 aa5.26□□□□□ -1.57
DMD-229ENST00000619831 FAM107BQ9H098 131 aa5.26□□□□□ -1.57
DMD-229ENST00000619831 ARGLU1Q9NWB6 273 aaPredicted RBP5.26□□□□□ -1.57
DMD-229ENST00000619831 CPLX3Q8WVH0 158 aa5.25□□□□□ -1.57
DMD-229ENST00000619831 FBLN1P23142 703 aa5.25□□□□□ -1.57
DMD-229ENST00000619831 RDXP35241 583 aaKnown RBP5.25□□□□□ -1.57
DMD-229ENST00000619831 DNAJC21Q5F1R6 531 aaKnown RBP5.25□□□□□ -1.57
DMD-229ENST00000619831 TFIP11Q9UBB9 837 aaKnown RBP5.25□□□□□ -1.57
DMD-229ENST00000619831 ZBTB22O15209 634 aa5.25□□□□□ -1.57
DMD-229ENST00000619831 NPM1P06748 294 aaKnown RBP eCLIP5.25□□□□□ -1.57
DMD-229ENST00000619831 LMAN1P49257 510 aa5.25□□□□□ -1.57
DMD-229ENST00000619831 FKBP5Q13451 457 aaPredicted RBP5.25□□□□□ -1.57
DMD-229ENST00000619831 PEG3Q9GZU2 1588 aa5.25□□□□□ -1.57
DMD-229ENST00000619831 NOL10Q9BSC4 688 aaKnown RBP5.25□□□□□ -1.57
DMD-229ENST00000619831 C10orf67Q8IYJ2 551 aa5.25□□□□□ -1.57
DMD-229ENST00000619831 ACBD3Q9H3P7 528 aa5.25□□□□□ -1.57
DMD-229ENST00000619831 SUPT6HQ7KZ85 1726 aaKnown RBP5.25□□□□□ -1.57
DMD-229ENST00000619831 BRD4O60885 1362 aaPredicted RBP5.25□□□□□ -1.57
DMD-229ENST00000619831 CFTRP13569 1480 aa5.25□□□□□ -1.57
DMD-229ENST00000619831 BAG4O95429 457 aaKnown RBP5.25□□□□□ -1.57
DMD-229ENST00000619831 MTHFSP49914 203 aa5.25□□□□□ -1.57
DMD-229ENST00000619831 GTF2A1P52655 376 aaPredicted RBP5.25□□□□□ -1.57
DMD-229ENST00000619831 CWC27Q6UX04 472 aaKnown RBP5.25□□□□□ -1.57
DMD-229ENST00000619831 DRC1Q96MC2 740 aa5.25□□□□□ -1.57
DMD-229ENST00000619831 RRP12Q5JTH9 1297 aaKnown RBP5.24□□□□□ -1.57
DMD-229ENST00000619831 SERPINC1P01008 464 aa5.24□□□□□ -1.57
DMD-229ENST00000619831 CCDC73Q6ZRK6 1079 aa5.24□□□□□ -1.57
DMD-229ENST00000619831 NEUROD6Q96NK8 337 aa5.24□□□□□ -1.57
DMD-229ENST00000619831 CLIP2Q9UDT6 1046 aa5.24□□□□□ -1.57
DMD-229ENST00000619831 KIF3BO15066 747 aa5.24□□□□□ -1.57
DMD-229ENST00000619831 AKAP17AQ02040 695 aaKnown RBP5.24□□□□□ -1.57
DMD-229ENST00000619831 TSR1Q2NL82 804 aaKnown RBP5.24□□□□□ -1.57
DMD-229ENST00000619831 HSP90B2PQ58FF3 399 aa5.24□□□□□ -1.57
DMD-229ENST00000619831 AK7Q96M32 723 aa5.24□□□□□ -1.57
DMD-229ENST00000619831 GAS2L2Q8NHY3 880 aa5.24□□□□□ -1.57
DMD-229ENST00000619831 RBSNQ9H1K0 784 aa5.24□□□□□ -1.57
DMD-229ENST00000619831 BIVM-ERCC5R4GMW8 1640 aa5.24□□□□□ -1.57
DMD-229ENST00000619831 AAMPQ13685 434 aa5.24□□□□□ -1.57
DMD-229ENST00000619831 CCDC144AA2RUR9 1427 aa5.24□□□□□ -1.57
DMD-229ENST00000619831 PLEKHH2Q8IVE3 1493 aa5.24□□□□□ -1.57
DMD-229ENST00000619831 HCLS1P14317 486 aaPredicted RBP5.24□□□□□ -1.57
DMD-229ENST00000619831 AMPHP49418 695 aa5.24□□□□□ -1.57
DMD-229ENST00000619831 ENOX2Q16206 610 aaKnown RBP5.24□□□□□ -1.57
DMD-229ENST00000619831 IRX3P78415 501 aaPredicted RBP5.24□□□□□ -1.57
DMD-229ENST00000619831 ZGPATQ8N5A5 531 aaKnown RBP5.24□□□□□ -1.57
DMD-229ENST00000619831 C16orf71Q8IYS4 520 aaPredicted RBP5.24□□□□□ -1.57
DMD-229ENST00000619831 C9orf78Q9NZ63 289 aaPredicted RBP5.24□□□□□ -1.57
DMD-229ENST00000619831 FGD6Q6ZV73 1430 aa5.23□□□□□ -1.57
DMD-229ENST00000619831 NECAB1Q8N987 351 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms