RNA–Protein interactions for RNA: ENST00000618666.4

CCNT1-205, Transcript of cyclin T1, humanhuman

TSL 2 BASIC

Gene CCNT1, Length 6,915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-205ENST00000618666 RBM28Q9NW13 759 aaKnown RBP6.44□□□□□ -1.38
CCNT1-205ENST00000618666 CENPQQ7L2Z9 268 aaPredicted RBP6.44□□□□□ -1.38
CCNT1-205ENST00000618666 GTPBP4Q9BZE4 634 aaKnown RBP6.44□□□□□ -1.38
CCNT1-205ENST00000618666 SMC4Q9NTJ3 1288 aa6.44□□□□□ -1.38
CCNT1-205ENST00000618666 UBXN4Q92575 508 aa6.44□□□□□ -1.38
CCNT1-205ENST00000618666 PSMD1Q99460 953 aa6.44□□□□□ -1.38
CCNT1-205ENST00000618666 CLNS1AP54105 237 aaKnown RBP6.44□□□□□ -1.38
CCNT1-205ENST00000618666 TMED8Q6PL24 325 aaPredicted RBP6.44□□□□□ -1.38
CCNT1-205ENST00000618666 SEPT14Q6ZU15 432 aa6.44□□□□□ -1.38
CCNT1-205ENST00000618666 RAI14Q9P0K7 980 aa6.44□□□□□ -1.38
CCNT1-205ENST00000618666 GCKP35557 465 aa6.44□□□□□ -1.38
CCNT1-205ENST00000618666 MTUS2Q5JR59 1369 aa6.43□□□□□ -1.38
CCNT1-205ENST00000618666 CSB-PGBD3P0DP91 1061 aa6.43□□□□□ -1.38
CCNT1-205ENST00000618666 FAM114A2Q9NRY5 505 aa6.43□□□□□ -1.38
CCNT1-205ENST00000618666 DYNC1I1O14576 645 aa6.43□□□□□ -1.38
CCNT1-205ENST00000618666 CCDC91Q7Z6B0 441 aa6.43□□□□□ -1.38
CCNT1-205ENST00000618666 RPSAP08865 295 aaKnown RBP6.43□□□□□ -1.38
CCNT1-205ENST00000618666 CNGA1P29973 690 aa6.43□□□□□ -1.38
CCNT1-205ENST00000618666 NEXNQ0ZGT2 675 aa6.43□□□□□ -1.38
CCNT1-205ENST00000618666 SAFB2Q14151 953 aaKnown RBP eCLIP6.43□□□□□ -1.38
CCNT1-205ENST00000618666 MYCBPQ99417 103 aaPredicted RBP6.43□□□□□ -1.38
CCNT1-205ENST00000618666 HOOK1Q9UJC3 728 aaKnown RBP6.43□□□□□ -1.38
CCNT1-205ENST00000618666 CAPN2P17655 700 aa6.43□□□□□ -1.38
CCNT1-205ENST00000618666 MLECQ14165 292 aa6.43□□□□□ -1.38
CCNT1-205ENST00000618666 CALR3Q96L12 384 aaKnown RBP6.43□□□□□ -1.38
CCNT1-205ENST00000618666 MAPK8IP3Q9UPT6 1336 aa6.42□□□□□ -1.38
CCNT1-205ENST00000618666 KSR1Q8IVT5 923 aa6.42□□□□□ -1.38
CCNT1-205ENST00000618666 ZNF513Q8N8E2 541 aaPredicted RBP6.42□□□□□ -1.38
CCNT1-205ENST00000618666 TPX2Q9ULW0 747 aaKnown RBP6.42□□□□□ -1.38
CCNT1-205ENST00000618666 TPM1P09493 284 aa6.42□□□□□ -1.38
CCNT1-205ENST00000618666 INF2Q27J81 1249 aa6.42□□□□□ -1.38
CCNT1-205ENST00000618666 CCDC184Q52MB2 194 aa6.42□□□□□ -1.38
CCNT1-205ENST00000618666 CCDC181Q5TID7 509 aa6.42□□□□□ -1.38
CCNT1-205ENST00000618666 CCDC97Q96F63 343 aaPredicted RBP6.42□□□□□ -1.38
CCNT1-205ENST00000618666 VPS18Q9P253 973 aa6.42□□□□□ -1.38
CCNT1-205ENST00000618666 KRT222Q8N1A0 295 aa6.42□□□□□ -1.38
CCNT1-205ENST00000618666 USH1CQ9Y6N9 552 aa6.42□□□□□ -1.38
CCNT1-205ENST00000618666 SSFA2P28290 1259 aa6.42□□□□□ -1.38
CCNT1-205ENST00000618666 TSR1Q2NL82 804 aaKnown RBP6.42□□□□□ -1.38
CCNT1-205ENST00000618666 DCTN1Q14203 1278 aa6.42□□□□□ -1.38
CCNT1-205ENST00000618666 HYPKQ9NX55 129 aa6.41□□□□□ -1.38
CCNT1-205ENST00000618666 STAG3Q9UJ98 1225 aa6.41□□□□□ -1.38
CCNT1-205ENST00000618666 EIF2S2P20042 333 aaKnown RBP6.41□□□□□ -1.38
CCNT1-205ENST00000618666 CHMP7Q8WUX9 453 aaPredicted RBP6.41□□□□□ -1.38
CCNT1-205ENST00000618666 TACO1Q9BSH4 297 aaKnown RBP6.41□□□□□ -1.38
CCNT1-205ENST00000618666 LCA5Q86VQ0 697 aa6.41□□□□□ -1.38
CCNT1-205ENST00000618666 PAF1Q8N7H5 531 aa6.41□□□□□ -1.38
CCNT1-205ENST00000618666 FAM184AQ8NB25 1140 aa6.41□□□□□ -1.38
CCNT1-205ENST00000618666 SLC26A8Q96RN1 970 aa6.41□□□□□ -1.38
CCNT1-205ENST00000618666 ATG3Q9NT62 314 aa6.41□□□□□ -1.38
CCNT1-205ENST00000618666 hCG_2014768A0A024R1R8 64 aa6.41□□□□□ -1.38
CCNT1-205ENST00000618666 ATP2B1P20020 1258 aa6.41□□□□□ -1.38
CCNT1-205ENST00000618666 VPS41P49754 854 aa6.41□□□□□ -1.38
CCNT1-205ENST00000618666 TRIM29Q14134 588 aa6.41□□□□□ -1.38
CCNT1-205ENST00000618666 MICALCLQ6ZW33 695 aa6.41□□□□□ -1.38
CCNT1-205ENST00000618666 PMFBP1Q8TBY8 1022 aa6.41□□□□□ -1.38
CCNT1-205ENST00000618666 PPP1R12CQ9BZL4 782 aa6.41□□□□□ -1.38
CCNT1-205ENST00000618666 KIF27Q86VH2 1401 aa6.4□□□□□ -1.38
CCNT1-205ENST00000618666 PPFIA3O75145 1194 aa6.4□□□□□ -1.38
CCNT1-205ENST00000618666 ANO2Q9NQ90 1003 aa6.4□□□□□ -1.38
CCNT1-205ENST00000618666 RBM33Q96EV2 1170 aaKnown RBP6.4□□□□□ -1.38
CCNT1-205ENST00000618666 CLIP1P30622 1438 aa6.4□□□□□ -1.38
CCNT1-205ENST00000618666 GOLGA3Q08378 1498 aa6.4□□□□□ -1.38
CCNT1-205ENST00000618666 TERF1P54274 439 aa6.4□□□□□ -1.38
CCNT1-205ENST00000618666 DDX54Q8TDD1 881 aaKnown RBP6.4□□□□□ -1.38
CCNT1-205ENST00000618666 UBE4AQ14139 1066 aa6.4□□□□□ -1.39
CCNT1-205ENST00000618666 PTPN14Q15678 1187 aa6.4□□□□□ -1.39
CCNT1-205ENST00000618666 HSP90AA4PQ58FG1 418 aa6.4□□□□□ -1.39
CCNT1-205ENST00000618666 CEP89Q96ST8 783 aa6.4□□□□□ -1.39
CCNT1-205ENST00000618666 STK31Q9BXU1 1019 aa6.4□□□□□ -1.39
CCNT1-205ENST00000618666 C1orf115Q9H7X2 142 aa6.4□□□□□ -1.39
CCNT1-205ENST00000618666 BAZ1AQ9NRL2 1556 aaPredicted RBP6.4□□□□□ -1.39
CCNT1-205ENST00000618666 GOLGA6L7A0A1B0GV03 622 aa6.4□□□□□ -1.39
CCNT1-205ENST00000618666 MATR3P43243 847 aaKnown RBP eCLIP6.4□□□□□ -1.39
CCNT1-205ENST00000618666 CDCA8Q53HL2 280 aa6.4□□□□□ -1.39
CCNT1-205ENST00000618666 STK3Q13188 491 aa6.39□□□□□ -1.39
CCNT1-205ENST00000618666 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.39□□□□□ -1.39
CCNT1-205ENST00000618666 CENPJQ9HC77 1338 aaPredicted RBP6.39□□□□□ -1.39
CCNT1-205ENST00000618666 CKAP2LQ8IYA6 745 aa6.39□□□□□ -1.39
CCNT1-205ENST00000618666 PLEKHD1A6NEE1 506 aa6.39□□□□□ -1.39
CCNT1-205ENST00000618666 ZEB2O60315 1214 aa6.39□□□□□ -1.39
CCNT1-205ENST00000618666 AP1ARQ63HQ0 302 aa6.39□□□□□ -1.39
CCNT1-205ENST00000618666 CTR9Q6PD62 1173 aa6.39□□□□□ -1.39
CCNT1-205ENST00000618666 NECTIN2Q92692 538 aa6.39□□□□□ -1.39
CCNT1-205ENST00000618666 SMIM23A6NLE4 172 aa6.39□□□□□ -1.39
CCNT1-205ENST00000618666 ADCY5O95622 1261 aa6.39□□□□□ -1.39
CCNT1-205ENST00000618666 SDF4Q9BRK5 362 aa6.39□□□□□ -1.39
CCNT1-205ENST00000618666 A0A1B0GUL7 405 aa6.39□□□□□ -1.39
CCNT1-205ENST00000618666 MS4A1P11836 297 aa6.39□□□□□ -1.39
CCNT1-205ENST00000618666 DDX11Q96FC9 970 aa6.39□□□□□ -1.39
CCNT1-205ENST00000618666 RANBP1P43487 201 aa6.38□□□□□ -1.39
CCNT1-205ENST00000618666 PSMD2Q13200 908 aa6.38□□□□□ -1.39
CCNT1-205ENST00000618666 ABTB1Q969K4 478 aaPredicted RBP6.38□□□□□ -1.39
CCNT1-205ENST00000618666 GOPCQ9HD26 462 aa6.38□□□□□ -1.39
CCNT1-205ENST00000618666 INCENPQ9NQS7 918 aa6.38□□□□□ -1.39
CCNT1-205ENST00000618666 DMTNQ08495 405 aa6.38□□□□□ -1.39
CCNT1-205ENST00000618666 NOLC1Q14978 699 aaKnown RBP eCLIP6.38□□□□□ -1.39
CCNT1-205ENST00000618666 CPLX3Q8WVH0 158 aa6.38□□□□□ -1.39
CCNT1-205ENST00000618666 WRNQ14191 1432 aaPredicted RBP eCLIP6.38□□□□□ -1.39
CCNT1-205ENST00000618666 KTN1Q86UP2 1357 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms