RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 SIL1Q9H173 461 aa12.47□□□□□ -0.41
SMARCA1-205ENST00000617310 MTMR7Q9Y216 660 aa12.47□□□□□ -0.41
SMARCA1-205ENST00000617310 SPG7Q9UQ90 795 aa12.47□□□□□ -0.41
SMARCA1-205ENST00000617310 CCDC27Q2M243 656 aa12.46□□□□□ -0.41
SMARCA1-205ENST00000617310 TSHZ2Q9NRE2 1034 aa12.46□□□□□ -0.41
SMARCA1-205ENST00000617310 TRAPPC8Q9Y2L5 1435 aa12.46□□□□□ -0.41
SMARCA1-205ENST00000617310 PTPN23Q9H3S7 1636 aa12.46□□□□□ -0.42
SMARCA1-205ENST00000617310 WASHC4Q2M389 1173 aa12.46□□□□□ -0.42
SMARCA1-205ENST00000617310 MPRIPQ6WCQ1 1025 aa12.45□□□□□ -0.42
SMARCA1-205ENST00000617310 NUP153P49790 1475 aaKnown RBP12.45□□□□□ -0.42
SMARCA1-205ENST00000617310 CTTNBP2Q8WZ74 1663 aa12.45□□□□□ -0.42
SMARCA1-205ENST00000617310 UBAP1LF5GYI3 381 aa12.45□□□□□ -0.42
SMARCA1-205ENST00000617310 KRT28Q7Z3Y7 464 aa12.45□□□□□ -0.42
SMARCA1-205ENST00000617310 NOL10Q9BSC4 688 aaKnown RBP12.45□□□□□ -0.42
SMARCA1-205ENST00000617310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.45□□□□□ -0.424e-6■□□□□ 8.3
SMARCA1-205ENST00000617310 TNRQ92752 1358 aa12.45□□□□□ -0.42
SMARCA1-205ENST00000617310 DHX16O60231 1041 aaKnown RBP12.45□□□□□ -0.42
SMARCA1-205ENST00000617310 ST18O60284 1047 aa12.45□□□□□ -0.42
SMARCA1-205ENST00000617310 NOB1Q9ULX3 412 aaKnown RBP12.45□□□□□ -0.42
SMARCA1-205ENST00000617310 BTBD11A6QL63 1104 aa12.44□□□□□ -0.42
SMARCA1-205ENST00000617310 KIF6Q6ZMV9 814 aa12.44□□□□□ -0.42
SMARCA1-205ENST00000617310 PTPRKQ15262 1439 aa12.44□□□□□ -0.42
SMARCA1-205ENST00000617310 MARCH6O60337 910 aa12.44□□□□□ -0.42
SMARCA1-205ENST00000617310 CREBRFQ8IUR6 639 aa12.44□□□□□ -0.42
SMARCA1-205ENST00000617310 CABLES1Q8TDN4 633 aa12.44□□□□□ -0.42
SMARCA1-205ENST00000617310 DRC7Q8IY82 874 aa12.43□□□□□ -0.42
SMARCA1-205ENST00000617310 FOSBP53539 338 aa12.43□□□□□ -0.42
SMARCA1-205ENST00000617310 KCNH5Q8NCM2 988 aa12.43□□□□□ -0.42
SMARCA1-205ENST00000617310 TRIM34Q9BYJ4 488 aa12.43□□□□□ -0.42
SMARCA1-205ENST00000617310 PLCH2O75038 1416 aa12.43□□□□□ -0.42
SMARCA1-205ENST00000617310 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.42□□□□□ -0.42
SMARCA1-205ENST00000617310 GBP4Q96PP9 640 aa12.42□□□□□ -0.42
SMARCA1-205ENST00000617310 TMPOP42166 694 aaKnown RBP12.42□□□□□ -0.42
SMARCA1-205ENST00000617310 MCTP1Q6DN14 999 aa12.42□□□□□ -0.42
SMARCA1-205ENST00000617310 CLASRPQ8N2M8 674 aaKnown RBP12.42□□□□□ -0.42
SMARCA1-205ENST00000617310 DNAJC2Q99543 621 aaKnown RBP12.42□□□□□ -0.42
SMARCA1-205ENST00000617310 SF3A1Q15459 793 aaKnown RBP12.42□□□□□ -0.42
SMARCA1-205ENST00000617310 C14orf93Q9H972 538 aaKnown RBP12.42□□□□□ -0.42
SMARCA1-205ENST00000617310 ACEP12821 1306 aa12.42□□□□□ -0.42
SMARCA1-205ENST00000617310 KDM4AO75164 1064 aa12.42□□□□□ -0.42
SMARCA1-205ENST00000617310 KDM5BQ9UGL1 1544 aa12.41□□□□□ -0.42
SMARCA1-205ENST00000617310 GNAI3P08754 354 aa12.41□□□□□ -0.42
SMARCA1-205ENST00000617310 ZKSCAN1P17029 563 aaPredicted RBP12.41□□□□□ -0.42
SMARCA1-205ENST00000617310 CADPS2Q86UW7 1296 aa12.41□□□□□ -0.42
SMARCA1-205ENST00000617310 NCKAP5LQ9HCH0 1330 aa12.41□□□□□ -0.42
SMARCA1-205ENST00000617310 FAM184AQ8NB25 1140 aa12.41□□□□□ -0.42
SMARCA1-205ENST00000617310 CNNM1Q9NRU3 951 aa12.41□□□□□ -0.42
SMARCA1-205ENST00000617310 FCHSD2O94868 740 aa12.4□□□□□ -0.42
SMARCA1-205ENST00000617310 RUFY2Q8WXA3 655 aa12.4□□□□□ -0.42
SMARCA1-205ENST00000617310 ZRANB1Q9UGI0 708 aa12.4□□□□□ -0.42
SMARCA1-205ENST00000617310 H3BQV1 296 aa12.4□□□□□ -0.43
SMARCA1-205ENST00000617310 AKAP17AQ02040 695 aaKnown RBP12.4□□□□□ -0.43
SMARCA1-205ENST00000617310 NFE2L2Q16236 605 aa12.4□□□□□ -0.43
SMARCA1-205ENST00000617310 IFFO2Q5TF58 517 aa12.4□□□□□ -0.43
SMARCA1-205ENST00000617310 STK11IPQ8N1F8 1099 aa12.4□□□□□ -0.43
SMARCA1-205ENST00000617310 LRRIQ1Q96JM4 1722 aa12.39□□□□□ -0.43
SMARCA1-205ENST00000617310 SRCIN1Q9C0H9 1055 aa12.39□□□□□ -0.43
SMARCA1-205ENST00000617310 HSP90AB4PQ58FF6 505 aa12.39□□□□□ -0.43
SMARCA1-205ENST00000617310 FSD1Q9BTV5 496 aa12.39□□□□□ -0.43
SMARCA1-205ENST00000617310 SPINK5Q9NQ38 1064 aaPredicted RBP12.39□□□□□ -0.43
SMARCA1-205ENST00000617310 GNAT3A8MTJ3 354 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 REC8O95072 547 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 TRDNQ13061 729 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 LRRFIP1Q32MZ4 808 aaKnown RBP12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 HSP90AB2PQ58FF8 381 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 WDR7Q9Y4E6 1490 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 SYCP2Q9BX26 1530 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 CPLX1O14810 134 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 SYNE3Q6ZMZ3 975 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 WWC1Q8IX03 1113 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 A2MP01023 1474 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 KCNA6P17658 529 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 AMOTL1Q8IY63 956 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 IPO9Q96P70 1041 aaKnown RBP12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 IL1RAPL2Q9NP60 686 aa12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 FAM83GA6ND36 823 aa12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 CHMP4CQ96CF2 233 aa12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 ANXA1P04083 346 aa12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 TMOD3Q9NYL9 352 aa12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 ERC2O15083 957 aa12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 GNAI2P04899 355 aa12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 DUSP27Q5VZP5 1158 aa12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 NFXL1Q6ZNB6 911 aa12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 ANO8Q9HCE9 1232 aaPredicted RBP12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 MAP4K4O95819 1239 aaPredicted RBP12.36□□□□□ -0.43
SMARCA1-205ENST00000617310 DMRT2Q9Y5R5 561 aa12.36□□□□□ -0.43
SMARCA1-205ENST00000617310 F6X3S4 739 aa12.36□□□□□ -0.43
SMARCA1-205ENST00000617310 NRDCO43847 1150 aa12.36□□□□□ -0.43
SMARCA1-205ENST00000617310 ADAMTS12P58397 1594 aa12.36□□□□□ -0.43
SMARCA1-205ENST00000617310 SAMD9Q5K651 1589 aa12.36□□□□□ -0.43
SMARCA1-205ENST00000617310 SRGAP3O43295 1099 aa12.36□□□□□ -0.43
SMARCA1-205ENST00000617310 ATF7IPQ6VMQ6 1270 aa12.36□□□□□ -0.43
SMARCA1-205ENST00000617310 MPHOSPH8Q99549 860 aa12.36□□□□□ -0.43
SMARCA1-205ENST00000617310 HTATSF1O43719 755 aaKnown RBP12.35□□□□□ -0.43
SMARCA1-205ENST00000617310 CPLX2Q6PUV4 134 aaKnown RBP12.35□□□□□ -0.43
SMARCA1-205ENST00000617310 UHRF1BP1LA0JNW5 1464 aa12.35□□□□□ -0.43
SMARCA1-205ENST00000617310 DISP3Q9P2K9 1392 aa12.35□□□□□ -0.43
SMARCA1-205ENST00000617310 GOLGA6L6A8MZA4 724 aa12.35□□□□□ -0.43
SMARCA1-205ENST00000617310 VPS37CA5D8V6 355 aaPredicted RBP12.34□□□□□ -0.43
SMARCA1-205ENST00000617310 RALYLQ86SE5 291 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms