RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 SIL1Q9H173 461 aa12.47□□□□□ -0.41
SMARCA1-205ENST00000617310 MTMR7Q9Y216 660 aa12.47□□□□□ -0.41
SMARCA1-205ENST00000617310 SPG7Q9UQ90 795 aa12.47□□□□□ -0.41
SMARCA1-205ENST00000617310 CCDC27Q2M243 656 aa12.46□□□□□ -0.41
SMARCA1-205ENST00000617310 TSHZ2Q9NRE2 1034 aa12.46□□□□□ -0.41
SMARCA1-205ENST00000617310 TRAPPC8Q9Y2L5 1435 aa12.46□□□□□ -0.41
SMARCA1-205ENST00000617310 PTPN23Q9H3S7 1636 aa12.46□□□□□ -0.42
SMARCA1-205ENST00000617310 WASHC4Q2M389 1173 aa12.46□□□□□ -0.42
SMARCA1-205ENST00000617310 MPRIPQ6WCQ1 1025 aa12.45□□□□□ -0.42
SMARCA1-205ENST00000617310 NUP153P49790 1475 aaKnown RBP12.45□□□□□ -0.42
SMARCA1-205ENST00000617310 CTTNBP2Q8WZ74 1663 aa12.45□□□□□ -0.42
SMARCA1-205ENST00000617310 UBAP1LF5GYI3 381 aa12.45□□□□□ -0.42
SMARCA1-205ENST00000617310 KRT28Q7Z3Y7 464 aa12.45□□□□□ -0.42
SMARCA1-205ENST00000617310 NOL10Q9BSC4 688 aaKnown RBP12.45□□□□□ -0.42
SMARCA1-205ENST00000617310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.45□□□□□ -0.424e-6■□□□□ 8.3
SMARCA1-205ENST00000617310 TNRQ92752 1358 aa12.45□□□□□ -0.42
SMARCA1-205ENST00000617310 DHX16O60231 1041 aaKnown RBP12.45□□□□□ -0.42
SMARCA1-205ENST00000617310 ST18O60284 1047 aa12.45□□□□□ -0.42
SMARCA1-205ENST00000617310 NOB1Q9ULX3 412 aaKnown RBP12.45□□□□□ -0.42
SMARCA1-205ENST00000617310 BTBD11A6QL63 1104 aa12.44□□□□□ -0.42
SMARCA1-205ENST00000617310 KIF6Q6ZMV9 814 aa12.44□□□□□ -0.42
SMARCA1-205ENST00000617310 PTPRKQ15262 1439 aa12.44□□□□□ -0.42
SMARCA1-205ENST00000617310 MARCH6O60337 910 aa12.44□□□□□ -0.42
SMARCA1-205ENST00000617310 CREBRFQ8IUR6 639 aa12.44□□□□□ -0.42
SMARCA1-205ENST00000617310 CABLES1Q8TDN4 633 aa12.44□□□□□ -0.42
SMARCA1-205ENST00000617310 DRC7Q8IY82 874 aa12.43□□□□□ -0.42
SMARCA1-205ENST00000617310 FOSBP53539 338 aa12.43□□□□□ -0.42
SMARCA1-205ENST00000617310 KCNH5Q8NCM2 988 aa12.43□□□□□ -0.42
SMARCA1-205ENST00000617310 TRIM34Q9BYJ4 488 aa12.43□□□□□ -0.42
SMARCA1-205ENST00000617310 PLCH2O75038 1416 aa12.43□□□□□ -0.42
SMARCA1-205ENST00000617310 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.42□□□□□ -0.42
SMARCA1-205ENST00000617310 GBP4Q96PP9 640 aa12.42□□□□□ -0.42
SMARCA1-205ENST00000617310 TMPOP42166 694 aaKnown RBP12.42□□□□□ -0.42
SMARCA1-205ENST00000617310 MCTP1Q6DN14 999 aa12.42□□□□□ -0.42
SMARCA1-205ENST00000617310 CLASRPQ8N2M8 674 aaKnown RBP12.42□□□□□ -0.42
SMARCA1-205ENST00000617310 DNAJC2Q99543 621 aaKnown RBP12.42□□□□□ -0.42
SMARCA1-205ENST00000617310 SF3A1Q15459 793 aaKnown RBP12.42□□□□□ -0.42
SMARCA1-205ENST00000617310 C14orf93Q9H972 538 aaKnown RBP12.42□□□□□ -0.42
SMARCA1-205ENST00000617310 ACEP12821 1306 aa12.42□□□□□ -0.42
SMARCA1-205ENST00000617310 KDM4AO75164 1064 aa12.42□□□□□ -0.42
SMARCA1-205ENST00000617310 KDM5BQ9UGL1 1544 aa12.41□□□□□ -0.42
SMARCA1-205ENST00000617310 GNAI3P08754 354 aa12.41□□□□□ -0.42
SMARCA1-205ENST00000617310 ZKSCAN1P17029 563 aaPredicted RBP12.41□□□□□ -0.42
SMARCA1-205ENST00000617310 CADPS2Q86UW7 1296 aa12.41□□□□□ -0.42
SMARCA1-205ENST00000617310 NCKAP5LQ9HCH0 1330 aa12.41□□□□□ -0.42
SMARCA1-205ENST00000617310 FAM184AQ8NB25 1140 aa12.41□□□□□ -0.42
SMARCA1-205ENST00000617310 CNNM1Q9NRU3 951 aa12.41□□□□□ -0.42
SMARCA1-205ENST00000617310 FCHSD2O94868 740 aa12.4□□□□□ -0.42
SMARCA1-205ENST00000617310 RUFY2Q8WXA3 655 aa12.4□□□□□ -0.42
SMARCA1-205ENST00000617310 ZRANB1Q9UGI0 708 aa12.4□□□□□ -0.42
SMARCA1-205ENST00000617310 H3BQV1 296 aa12.4□□□□□ -0.43
SMARCA1-205ENST00000617310 AKAP17AQ02040 695 aaKnown RBP12.4□□□□□ -0.43
SMARCA1-205ENST00000617310 NFE2L2Q16236 605 aa12.4□□□□□ -0.43
SMARCA1-205ENST00000617310 IFFO2Q5TF58 517 aa12.4□□□□□ -0.43
SMARCA1-205ENST00000617310 STK11IPQ8N1F8 1099 aa12.4□□□□□ -0.43
SMARCA1-205ENST00000617310 LRRIQ1Q96JM4 1722 aa12.39□□□□□ -0.43
SMARCA1-205ENST00000617310 SRCIN1Q9C0H9 1055 aa12.39□□□□□ -0.43
SMARCA1-205ENST00000617310 HSP90AB4PQ58FF6 505 aa12.39□□□□□ -0.43
SMARCA1-205ENST00000617310 FSD1Q9BTV5 496 aa12.39□□□□□ -0.43
SMARCA1-205ENST00000617310 SPINK5Q9NQ38 1064 aaPredicted RBP12.39□□□□□ -0.43
SMARCA1-205ENST00000617310 GNAT3A8MTJ3 354 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 REC8O95072 547 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 TRDNQ13061 729 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 LRRFIP1Q32MZ4 808 aaKnown RBP12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 HSP90AB2PQ58FF8 381 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 WDR7Q9Y4E6 1490 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 SYCP2Q9BX26 1530 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 CPLX1O14810 134 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 SYNE3Q6ZMZ3 975 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 WWC1Q8IX03 1113 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 A2MP01023 1474 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 KCNA6P17658 529 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 AMOTL1Q8IY63 956 aa12.38□□□□□ -0.43
SMARCA1-205ENST00000617310 IPO9Q96P70 1041 aaKnown RBP12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 IL1RAPL2Q9NP60 686 aa12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 FAM83GA6ND36 823 aa12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 CHMP4CQ96CF2 233 aa12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 ANXA1P04083 346 aa12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 TMOD3Q9NYL9 352 aa12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 ERC2O15083 957 aa12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 GNAI2P04899 355 aa12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 DUSP27Q5VZP5 1158 aa12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 NFXL1Q6ZNB6 911 aa12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 ANO8Q9HCE9 1232 aaPredicted RBP12.37□□□□□ -0.43
SMARCA1-205ENST00000617310 MAP4K4O95819 1239 aaPredicted RBP12.36□□□□□ -0.43
SMARCA1-205ENST00000617310 DMRT2Q9Y5R5 561 aa12.36□□□□□ -0.43
SMARCA1-205ENST00000617310 F6X3S4 739 aa12.36□□□□□ -0.43
SMARCA1-205ENST00000617310 NRDCO43847 1150 aa12.36□□□□□ -0.43
SMARCA1-205ENST00000617310 ADAMTS12P58397 1594 aa12.36□□□□□ -0.43
SMARCA1-205ENST00000617310 SAMD9Q5K651 1589 aa12.36□□□□□ -0.43
SMARCA1-205ENST00000617310 SRGAP3O43295 1099 aa12.36□□□□□ -0.43
SMARCA1-205ENST00000617310 ATF7IPQ6VMQ6 1270 aa12.36□□□□□ -0.43
SMARCA1-205ENST00000617310 MPHOSPH8Q99549 860 aa12.36□□□□□ -0.43
SMARCA1-205ENST00000617310 HTATSF1O43719 755 aaKnown RBP12.35□□□□□ -0.43
SMARCA1-205ENST00000617310 CPLX2Q6PUV4 134 aaKnown RBP12.35□□□□□ -0.43
SMARCA1-205ENST00000617310 UHRF1BP1LA0JNW5 1464 aa12.35□□□□□ -0.43
SMARCA1-205ENST00000617310 DISP3Q9P2K9 1392 aa12.35□□□□□ -0.43
SMARCA1-205ENST00000617310 GOLGA6L6A8MZA4 724 aa12.35□□□□□ -0.43
SMARCA1-205ENST00000617310 VPS37CA5D8V6 355 aaPredicted RBP12.34□□□□□ -0.43
SMARCA1-205ENST00000617310 RALYLQ86SE5 291 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms