RNA–Protein interactions for RNA: ENST00000616683.4

RAD17-220, Transcript of RAD17 checkpoint clamp loader component, humanhuman

TSL 1 (best) BASIC

Gene RAD17, Length 3,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD17-220ENST00000616683 CCDC125Q86Z20 511 aa6.79□□□□□ -1.32
RAD17-220ENST00000616683 SNRNP27Q8WVK2 155 aaKnown RBP6.79□□□□□ -1.32
RAD17-220ENST00000616683 NUCKS1Q9H1E3 243 aaKnown RBP6.79□□□□□ -1.32
RAD17-220ENST00000616683 RASSF4Q9H2L5 321 aa6.79□□□□□ -1.32
RAD17-220ENST00000616683 KANK1Q14678 1352 aa6.79□□□□□ -1.32
RAD17-220ENST00000616683 HSP90AB1P08238 724 aaKnown RBP6.79□□□□□ -1.32
RAD17-220ENST00000616683 ERCC3P19447 782 aa6.79□□□□□ -1.32
RAD17-220ENST00000616683 ERCC4Q92889 916 aaPredicted RBP6.79□□□□□ -1.32
RAD17-220ENST00000616683 TSPOAP1O95153 1857 aa6.78□□□□□ -1.32
RAD17-220ENST00000616683 HSPA2P54652 639 aa6.78□□□□□ -1.32
RAD17-220ENST00000616683 TSGA10IPQ3SY00 556 aa6.78□□□□□ -1.32
RAD17-220ENST00000616683 CCDC91Q7Z6B0 441 aa6.78□□□□□ -1.32
RAD17-220ENST00000616683 ANKRD7Q92527 254 aa6.78□□□□□ -1.32
RAD17-220ENST00000616683 NOL10Q9BSC4 688 aaKnown RBP6.78□□□□□ -1.32
RAD17-220ENST00000616683 ANTXR1Q9H6X2 564 aa6.78□□□□□ -1.32
RAD17-220ENST00000616683 KCTD17Q8N5Z5 321 aa6.78□□□□□ -1.32
RAD17-220ENST00000616683 TNPO1Q92973 898 aaKnown RBP6.78□□□□□ -1.32
RAD17-220ENST00000616683 RANBP17Q9H2T7 1088 aaKnown RBP6.78□□□□□ -1.32
RAD17-220ENST00000616683 SUDS3Q9H7L9 328 aaPredicted RBP6.78□□□□□ -1.32
RAD17-220ENST00000616683 PHF8Q9UPP1 1060 aa6.78□□□□□ -1.32
RAD17-220ENST00000616683 HELBQ8NG08 1087 aaPredicted RBP6.78□□□□□ -1.32
RAD17-220ENST00000616683 CCDC97Q96F63 343 aaPredicted RBP6.78□□□□□ -1.32
RAD17-220ENST00000616683 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.78□□□□□ -1.32
RAD17-220ENST00000616683 TPM3P06753 285 aa6.77□□□□□ -1.33
RAD17-220ENST00000616683 NUDCQ9Y266 331 aa6.77□□□□□ -1.33
RAD17-220ENST00000616683 FAM163BP0C2L3 166 aa6.77□□□□□ -1.33
RAD17-220ENST00000616683 CASQ1P31415 396 aa6.77□□□□□ -1.33
RAD17-220ENST00000616683 RAD51AP2Q09MP3 1159 aa6.77□□□□□ -1.33
RAD17-220ENST00000616683 MUM1L1Q5H9M0 696 aa6.77□□□□□ -1.33
RAD17-220ENST00000616683 HDGFL1Q5TGJ6 251 aa6.77□□□□□ -1.33
RAD17-220ENST00000616683 KIAA1107Q9UPP5 1409 aa6.77□□□□□ -1.33
RAD17-220ENST00000616683 DDX49Q9Y6V7 483 aaKnown RBP6.77□□□□□ -1.33
RAD17-220ENST00000616683 ZSCAN26Q16670 478 aa6.76□□□□□ -1.33
RAD17-220ENST00000616683 KLHL23Q8NBE8 558 aa6.76□□□□□ -1.33
RAD17-220ENST00000616683 LARP6Q9BRS8 491 aaKnown RBP6.76□□□□□ -1.33
RAD17-220ENST00000616683 CHAF1AQ13111 956 aaPredicted RBP6.76□□□□□ -1.33
RAD17-220ENST00000616683 NLRP13Q86W25 1043 aa6.76□□□□□ -1.33
RAD17-220ENST00000616683 FAM184AQ8NB25 1140 aa6.76□□□□□ -1.33
RAD17-220ENST00000616683 PROCA1Q8NCQ7 364 aaPredicted RBP6.76□□□□□ -1.33
RAD17-220ENST00000616683 SYNPO2Q9UMS6 1093 aa6.76□□□□□ -1.33
RAD17-220ENST00000616683 WDR97A6NE52 1622 aa6.76□□□□□ -1.33
RAD17-220ENST00000616683 SYNRGQ9UMZ2 1314 aa6.75□□□□□ -1.33
RAD17-220ENST00000616683 BRD1O95696 1058 aa6.75□□□□□ -1.33
RAD17-220ENST00000616683 HSPA5P11021 654 aaKnown RBP6.75□□□□□ -1.33
RAD17-220ENST00000616683 ATP2B1P20020 1258 aa6.75□□□□□ -1.33
RAD17-220ENST00000616683 SLC4A3P48751 1232 aa6.75□□□□□ -1.33
RAD17-220ENST00000616683 SUGP1Q8IWZ8 645 aaKnown RBP6.75□□□□□ -1.33
RAD17-220ENST00000616683 PDCL2Q8N4E4 241 aa6.75□□□□□ -1.33
RAD17-220ENST00000616683 SLX1AQ9BQ83 275 aa6.75□□□□□ -1.33
RAD17-220ENST00000616683 C1orf115Q9H7X2 142 aa6.75□□□□□ -1.33
RAD17-220ENST00000616683 PTPRGP23470 1445 aa6.75□□□□□ -1.33
RAD17-220ENST00000616683 MAGEA8P43361 318 aa6.75□□□□□ -1.33
RAD17-220ENST00000616683 ZNF280DQ6N043 979 aa6.75□□□□□ -1.33
RAD17-220ENST00000616683 CACTIN-AS1Q8N1I8 211 aa6.75□□□□□ -1.33
RAD17-220ENST00000616683 MORC2Q9Y6X9 1032 aaPredicted RBP6.75□□□□□ -1.33
RAD17-220ENST00000616683 HECW2Q9P2P5 1572 aa6.75□□□□□ -1.33
RAD17-220ENST00000616683 SKILP12757 684 aa6.75□□□□□ -1.33
RAD17-220ENST00000616683 ABCD1P33897 745 aa6.75□□□□□ -1.33
RAD17-220ENST00000616683 MCM4P33991 863 aa6.75□□□□□ -1.33
RAD17-220ENST00000616683 SYCP1Q15431 976 aa6.75□□□□□ -1.33
RAD17-220ENST00000616683 TATDN2Q93075 761 aa6.75□□□□□ -1.33
RAD17-220ENST00000616683 PDLIM2Q96JY6 352 aa6.75□□□□□ -1.33
RAD17-220ENST00000616683 PANK3Q9H999 370 aa6.75□□□□□ -1.33
RAD17-220ENST00000616683 UPF2Q9HAU5 1272 aaKnown RBP6.75□□□□□ -1.33
RAD17-220ENST00000616683 FAM53CQ9NYF3 392 aa6.75□□□□□ -1.33
RAD17-220ENST00000616683 CLASP1Q7Z460 1538 aa6.74□□□□□ -1.33
RAD17-220ENST00000616683 TESPA1A2RU30 521 aaPredicted RBP6.74□□□□□ -1.33
RAD17-220ENST00000616683 REC8O95072 547 aa6.74□□□□□ -1.33
RAD17-220ENST00000616683 RBM5P52756 815 aaKnown RBP eCLIP6.74□□□□□ -1.33
RAD17-220ENST00000616683 FOXD4L5Q5VV16 416 aaPredicted RBP6.74□□□□□ -1.33
RAD17-220ENST00000616683 ATL2Q8NHH9 583 aa6.74□□□□□ -1.33
RAD17-220ENST00000616683 FOXD4L4Q8WXT5 416 aaPredicted RBP6.74□□□□□ -1.33
RAD17-220ENST00000616683 ZKSCAN5Q9Y2L8 839 aa6.74□□□□□ -1.33
RAD17-220ENST00000616683 IL16Q14005 1332 aa6.74□□□□□ -1.33
RAD17-220ENST00000616683 GRIN2AQ12879 1464 aa6.74□□□□□ -1.33
RAD17-220ENST00000616683 H0YHG0 523 aa6.74□□□□□ -1.33
RAD17-220ENST00000616683 SARNPP82979 210 aaKnown RBP6.74□□□□□ -1.33
RAD17-220ENST00000616683 JAKMIP3Q5VZ66 844 aa6.74□□□□□ -1.33
RAD17-220ENST00000616683 TACO1Q9BSH4 297 aaKnown RBP6.74□□□□□ -1.33
RAD17-220ENST00000616683 MAF1Q9H063 256 aa6.74□□□□□ -1.33
RAD17-220ENST00000616683 JRKLQ9Y4A0 524 aa6.74□□□□□ -1.33
RAD17-220ENST00000616683 TARBP1Q13395 1621 aaKnown RBP6.74□□□□□ -1.33
RAD17-220ENST00000616683 KDM6BO15054 1643 aa6.73□□□□□ -1.33
RAD17-220ENST00000616683 ATP6V1AP38606 617 aa6.73□□□□□ -1.33
RAD17-220ENST00000616683 IRX1P78414 480 aaPredicted RBP6.73□□□□□ -1.33
RAD17-220ENST00000616683 SF3A1Q15459 793 aaKnown RBP6.73□□□□□ -1.33
RAD17-220ENST00000616683 FAM161AQ3B820 660 aa6.73□□□□□ -1.33
RAD17-220ENST00000616683 CADPS2Q86UW7 1296 aa6.73□□□□□ -1.33
RAD17-220ENST00000616683 MORC1Q86VD1 984 aa6.73□□□□□ -1.33
RAD17-220ENST00000616683 DDX11L8A8MPP1 907 aa6.73□□□□□ -1.33
RAD17-220ENST00000616683 EIF3JO75822 258 aaKnown RBP6.73□□□□□ -1.33
RAD17-220ENST00000616683 AMOTQ4VCS5 1084 aa6.73□□□□□ -1.33
RAD17-220ENST00000616683 LSM14AQ8ND56 463 aaKnown RBP6.73□□□□□ -1.33
RAD17-220ENST00000616683 SIN3AQ96ST3 1273 aa6.73□□□□□ -1.33
RAD17-220ENST00000616683 ATG3Q9NT62 314 aa6.73□□□□□ -1.33
RAD17-220ENST00000616683 SUN2Q9UH99 717 aa6.73□□□□□ -1.33
RAD17-220ENST00000616683 MAPKBP1O60336 1514 aa6.73□□□□□ -1.33
RAD17-220ENST00000616683 TRAK2O60296 914 aa6.73□□□□□ -1.33
RAD17-220ENST00000616683 KRBA2Q6ZNG9 492 aa6.73□□□□□ -1.33
RAD17-220ENST00000616683 DZIP3Q86Y13 1208 aaKnown RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms