RNA–Protein interactions for RNA: ENST00000615287.4

CHRNA4-207, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA4, Length 5,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-207ENST00000615287 EXOSC9Q06265 439 aaKnown RBP22.36■■□□□ 1.17
CHRNA4-207ENST00000615287 SURF6O75683 361 aaKnown RBP22.35■■□□□ 1.17
CHRNA4-207ENST00000615287 FOXD4L6Q3SYB3 417 aaPredicted RBP22.35■■□□□ 1.17
CHRNA4-207ENST00000615287 FOXD4L3Q6VB84 417 aaPredicted RBP22.35■■□□□ 1.17
CHRNA4-207ENST00000615287 KCNH5Q8NCM2 988 aa22.35■■□□□ 1.17
CHRNA4-207ENST00000615287 KIF14Q15058 1648 aa22.34■■□□□ 1.17
CHRNA4-207ENST00000615287 DDX11L8A8MPP1 907 aa22.34■■□□□ 1.17
CHRNA4-207ENST00000615287 RRS1Q15050 365 aaKnown RBP22.33■■□□□ 1.17
CHRNA4-207ENST00000615287 CNNM1Q9NRU3 951 aa22.33■■□□□ 1.17
CHRNA4-207ENST00000615287 NINLQ9Y2I6 1382 aa22.33■■□□□ 1.16
CHRNA4-207ENST00000615287 TPM2P07951 284 aa22.32■■□□□ 1.16
CHRNA4-207ENST00000615287 CCDC47Q96A33 483 aaKnown RBP22.32■■□□□ 1.16
CHRNA4-207ENST00000615287 FSD1Q9BTV5 496 aa22.32■■□□□ 1.16
CHRNA4-207ENST00000615287 CAMSAP2Q08AD1 1489 aa22.31■■□□□ 1.16
CHRNA4-207ENST00000615287 SLC4A2P04920 1241 aa22.31■■□□□ 1.16
CHRNA4-207ENST00000615287 TPM3P06753 285 aa22.31■■□□□ 1.16
CHRNA4-207ENST00000615287 CNTROBQ8N137 903 aa22.31■■□□□ 1.16
CHRNA4-207ENST00000615287 AKNAQ7Z591 1439 aa22.3■■□□□ 1.16
CHRNA4-207ENST00000615287 PDE4CQ08493 712 aa22.3■■□□□ 1.16
CHRNA4-207ENST00000615287 CCDC43Q96MW1 224 aaKnown RBP22.3■■□□□ 1.16
CHRNA4-207ENST00000615287 DENND4BO75064 1496 aaPredicted RBP22.3■■□□□ 1.16
CHRNA4-207ENST00000615287 GNL3LQ9NVN8 582 aaKnown RBP22.29■■□□□ 1.16
CHRNA4-207ENST00000615287 WAPLQ7Z5K2 1190 aa22.29■■□□□ 1.16
CHRNA4-207ENST00000615287 CEBPAP49715 358 aaPredicted RBP22.29■■□□□ 1.16
CHRNA4-207ENST00000615287 ERC1Q8IUD2 1116 aa22.29■■□□□ 1.16
CHRNA4-207ENST00000615287 HMGB2P26583 209 aaKnown RBP22.29■■□□□ 1.16
CHRNA4-207ENST00000615287 SAFBQ15424 915 aaKnown RBP eCLIP22.29■■□□□ 1.16
CHRNA4-207ENST00000615287 TSR1Q2NL82 804 aaKnown RBP22.29■■□□□ 1.16
CHRNA4-207ENST00000615287 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.29■■□□□ 1.16
CHRNA4-207ENST00000615287 URB2Q14146 1524 aaKnown RBP22.28■■□□□ 1.16
CHRNA4-207ENST00000615287 DNAJC2Q99543 621 aaKnown RBP22.28■■□□□ 1.16
CHRNA4-207ENST00000615287 GNAI2P04899 355 aa22.28■■□□□ 1.16
CHRNA4-207ENST00000615287 DEKP35659 375 aaKnown RBP22.27■■□□□ 1.16
CHRNA4-207ENST00000615287 BECN2A8MW95 431 aa22.27■■□□□ 1.16
CHRNA4-207ENST00000615287 MYL6BP14649 208 aa22.27■■□□□ 1.16
CHRNA4-207ENST00000615287 DDX49Q9Y6V7 483 aaKnown RBP22.27■■□□□ 1.16
CHRNA4-207ENST00000615287 GOLGA6L19H0YKK7 550 aa22.27■■□□□ 1.16
CHRNA4-207ENST00000615287 FBXO31Q5XUX0 539 aaPredicted RBP22.26■■□□□ 1.15
CHRNA4-207ENST00000615287 TSR2Q969E8 191 aaKnown RBP22.26■■□□□ 1.15
CHRNA4-207ENST00000615287 DMRT2Q9Y5R5 561 aa22.26■■□□□ 1.15
CHRNA4-207ENST00000615287 BTBD11A6QL63 1104 aa22.26■■□□□ 1.15
CHRNA4-207ENST00000615287 PRM3Q9NNZ6 103 aa22.26■■□□□ 1.15
CHRNA4-207ENST00000615287 PPP6R1Q9UPN7 881 aa22.26■■□□□ 1.15
CHRNA4-207ENST00000615287 CCDC158Q5M9N0 1113 aa22.26■■□□□ 1.15
CHRNA4-207ENST00000615287 SMC3Q9UQE7 1217 aa22.25■■□□□ 1.15
CHRNA4-207ENST00000615287 AMOTL2Q9Y2J4 779 aa22.25■■□□□ 1.15
CHRNA4-207ENST00000615287 ZNF608Q9ULD9 1512 aaPredicted RBP22.25■■□□□ 1.15
CHRNA4-207ENST00000615287 CDC45O75419 566 aa22.25■■□□□ 1.15
CHRNA4-207ENST00000615287 IKQ13123 557 aaPredicted RBP22.25■■□□□ 1.15
CHRNA4-207ENST00000615287 TTC39AQ5SRH9 613 aa22.25■■□□□ 1.15
CHRNA4-207ENST00000615287 PCF11O94913 1555 aaKnown RBP22.24■■□□□ 1.15
CHRNA4-207ENST00000615287 CCT4P50991 539 aaKnown RBP22.24■■□□□ 1.15
CHRNA4-207ENST00000615287 SRCIN1Q9C0H9 1055 aa22.24■■□□□ 1.15
CHRNA4-207ENST00000615287 SART3Q15020 963 aaKnown RBP22.23■■□□□ 1.15
CHRNA4-207ENST00000615287 CDCA7LQ96GN5 454 aa22.23■■□□□ 1.15
CHRNA4-207ENST00000615287 SLC3A2P08195 630 aaKnown RBP22.23■■□□□ 1.15
CHRNA4-207ENST00000615287 TPM1P09493 284 aa22.23■■□□□ 1.15
CHRNA4-207ENST00000615287 HOOK1Q9UJC3 728 aaKnown RBP22.23■■□□□ 1.15
CHRNA4-207ENST00000615287 VPS37CA5D8V6 355 aaPredicted RBP22.23■■□□□ 1.15
CHRNA4-207ENST00000615287 MTMR7Q9Y216 660 aa22.23■■□□□ 1.15
CHRNA4-207ENST00000615287 NOB1Q9ULX3 412 aaKnown RBP22.22■■□□□ 1.15
CHRNA4-207ENST00000615287 FANCAO15360 1455 aa22.22■■□□□ 1.15
CHRNA4-207ENST00000615287 PHF8Q9UPP1 1060 aa22.22■■□□□ 1.15
CHRNA4-207ENST00000615287 PSMA5P28066 241 aa22.22■■□□□ 1.15
CHRNA4-207ENST00000615287 TSHZ2Q9NRE2 1034 aa22.22■■□□□ 1.15
CHRNA4-207ENST00000615287 FCHSD2O94868 740 aa22.22■■□□□ 1.15
CHRNA4-207ENST00000615287 SKOR2Q2VWA4 1001 aaPredicted RBP22.22■■□□□ 1.15
CHRNA4-207ENST00000615287 MPHOSPH8Q99549 860 aa22.22■■□□□ 1.15
CHRNA4-207ENST00000615287 SLC4A3P48751 1232 aa22.21■■□□□ 1.15
CHRNA4-207ENST00000615287 BRMS1Q9HCU9 246 aa22.21■■□□□ 1.15
CHRNA4-207ENST00000615287 NSD3Q9BZ95 1437 aa22.21■■□□□ 1.15
CHRNA4-207ENST00000615287 HIP1O00291 1037 aa22.21■■□□□ 1.15
CHRNA4-207ENST00000615287 WDR63Q8IWG1 891 aa22.21■■□□□ 1.15
CHRNA4-207ENST00000615287 NAIPQ13075 1403 aa22.2■■□□□ 1.14
CHRNA4-207ENST00000615287 XBP1P17861 261 aa22.2■■□□□ 1.14
CHRNA4-207ENST00000615287 BICD2Q8TD16 824 aa22.2■■□□□ 1.14
CHRNA4-207ENST00000615287 IDI1Q13907 227 aa22.2■■□□□ 1.14
CHRNA4-207ENST00000615287 CCDC57Q2TAC2 916 aa22.2■■□□□ 1.14
CHRNA4-207ENST00000615287 ADAMTS2O95450 1211 aa22.19■■□□□ 1.14
CHRNA4-207ENST00000615287 FOSBP53539 338 aa22.19■■□□□ 1.14
CHRNA4-207ENST00000615287 ABCC5O15440 1437 aa22.19■■□□□ 1.14
CHRNA4-207ENST00000615287 GNAT3A8MTJ3 354 aa22.19■■□□□ 1.14
CHRNA4-207ENST00000615287 STARD3NLO95772 234 aa22.19■■□□□ 1.14
CHRNA4-207ENST00000615287 ANKRD20A12PQ8NF67 263 aa22.18■■□□□ 1.14
CHRNA4-207ENST00000615287 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.18■■□□□ 1.14
CHRNA4-207ENST00000615287 FOXO3O43524 673 aa22.18■■□□□ 1.14
CHRNA4-207ENST00000615287 CT47B1P0C2W7 299 aaPredicted RBP22.18■■□□□ 1.14
CHRNA4-207ENST00000615287 C1orf115Q9H7X2 142 aa22.18■■□□□ 1.14
CHRNA4-207ENST00000615287 PCMTD1Q96MG8 357 aaPredicted RBP22.17■■□□□ 1.14
CHRNA4-207ENST00000615287 SIL1Q9H173 461 aa22.16■■□□□ 1.14
CHRNA4-207ENST00000615287 CCAR1Q8IX12 1150 aaKnown RBP22.16■■□□□ 1.14
CHRNA4-207ENST00000615287 TMOD3Q9NYL9 352 aa22.16■■□□□ 1.14
CHRNA4-207ENST00000615287 BICDL1Q6ZP65 573 aa22.15■■□□□ 1.14
CHRNA4-207ENST00000615287 C22orf23Q9BZE7 217 aa22.15■■□□□ 1.14
CHRNA4-207ENST00000615287 GCC1Q96CN9 775 aa22.15■■□□□ 1.14
CHRNA4-207ENST00000615287 LRPPRCP42704 1394 aaKnown RBP22.15■■□□□ 1.14
CHRNA4-207ENST00000615287 ZNF428Q96B54 188 aa22.15■■□□□ 1.14
CHRNA4-207ENST00000615287 PTPN23Q9H3S7 1636 aa22.15■■□□□ 1.14
CHRNA4-207ENST00000615287 NFE2L2Q16236 605 aa22.15■■□□□ 1.14
CHRNA4-207ENST00000615287 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms