RNA–Protein interactions for RNA: ENST00000615287.4

CHRNA4-207, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA4, Length 5,643 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-207ENST00000615287 EXOSC9Q06265 439 aaKnown RBP22.36■■□□□ 1.17
CHRNA4-207ENST00000615287 SURF6O75683 361 aaKnown RBP22.35■■□□□ 1.17
CHRNA4-207ENST00000615287 FOXD4L6Q3SYB3 417 aaPredicted RBP22.35■■□□□ 1.17
CHRNA4-207ENST00000615287 FOXD4L3Q6VB84 417 aaPredicted RBP22.35■■□□□ 1.17
CHRNA4-207ENST00000615287 KCNH5Q8NCM2 988 aa22.35■■□□□ 1.17
CHRNA4-207ENST00000615287 KIF14Q15058 1648 aa22.34■■□□□ 1.17
CHRNA4-207ENST00000615287 DDX11L8A8MPP1 907 aa22.34■■□□□ 1.17
CHRNA4-207ENST00000615287 RRS1Q15050 365 aaKnown RBP22.33■■□□□ 1.17
CHRNA4-207ENST00000615287 CNNM1Q9NRU3 951 aa22.33■■□□□ 1.17
CHRNA4-207ENST00000615287 NINLQ9Y2I6 1382 aa22.33■■□□□ 1.16
CHRNA4-207ENST00000615287 TPM2P07951 284 aa22.32■■□□□ 1.16
CHRNA4-207ENST00000615287 CCDC47Q96A33 483 aaKnown RBP22.32■■□□□ 1.16
CHRNA4-207ENST00000615287 FSD1Q9BTV5 496 aa22.32■■□□□ 1.16
CHRNA4-207ENST00000615287 CAMSAP2Q08AD1 1489 aa22.31■■□□□ 1.16
CHRNA4-207ENST00000615287 SLC4A2P04920 1241 aa22.31■■□□□ 1.16
CHRNA4-207ENST00000615287 TPM3P06753 285 aa22.31■■□□□ 1.16
CHRNA4-207ENST00000615287 CNTROBQ8N137 903 aa22.31■■□□□ 1.16
CHRNA4-207ENST00000615287 AKNAQ7Z591 1439 aa22.3■■□□□ 1.16
CHRNA4-207ENST00000615287 PDE4CQ08493 712 aa22.3■■□□□ 1.16
CHRNA4-207ENST00000615287 CCDC43Q96MW1 224 aaKnown RBP22.3■■□□□ 1.16
CHRNA4-207ENST00000615287 DENND4BO75064 1496 aaPredicted RBP22.3■■□□□ 1.16
CHRNA4-207ENST00000615287 GNL3LQ9NVN8 582 aaKnown RBP22.29■■□□□ 1.16
CHRNA4-207ENST00000615287 WAPLQ7Z5K2 1190 aa22.29■■□□□ 1.16
CHRNA4-207ENST00000615287 CEBPAP49715 358 aaPredicted RBP22.29■■□□□ 1.16
CHRNA4-207ENST00000615287 ERC1Q8IUD2 1116 aa22.29■■□□□ 1.16
CHRNA4-207ENST00000615287 HMGB2P26583 209 aaKnown RBP22.29■■□□□ 1.16
CHRNA4-207ENST00000615287 SAFBQ15424 915 aaKnown RBP eCLIP22.29■■□□□ 1.16
CHRNA4-207ENST00000615287 TSR1Q2NL82 804 aaKnown RBP22.29■■□□□ 1.16
CHRNA4-207ENST00000615287 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.29■■□□□ 1.16
CHRNA4-207ENST00000615287 URB2Q14146 1524 aaKnown RBP22.28■■□□□ 1.16
CHRNA4-207ENST00000615287 DNAJC2Q99543 621 aaKnown RBP22.28■■□□□ 1.16
CHRNA4-207ENST00000615287 GNAI2P04899 355 aa22.28■■□□□ 1.16
CHRNA4-207ENST00000615287 DEKP35659 375 aaKnown RBP22.27■■□□□ 1.16
CHRNA4-207ENST00000615287 BECN2A8MW95 431 aa22.27■■□□□ 1.16
CHRNA4-207ENST00000615287 MYL6BP14649 208 aa22.27■■□□□ 1.16
CHRNA4-207ENST00000615287 DDX49Q9Y6V7 483 aaKnown RBP22.27■■□□□ 1.16
CHRNA4-207ENST00000615287 GOLGA6L19H0YKK7 550 aa22.27■■□□□ 1.16
CHRNA4-207ENST00000615287 FBXO31Q5XUX0 539 aaPredicted RBP22.26■■□□□ 1.15
CHRNA4-207ENST00000615287 TSR2Q969E8 191 aaKnown RBP22.26■■□□□ 1.15
CHRNA4-207ENST00000615287 DMRT2Q9Y5R5 561 aa22.26■■□□□ 1.15
CHRNA4-207ENST00000615287 BTBD11A6QL63 1104 aa22.26■■□□□ 1.15
CHRNA4-207ENST00000615287 PRM3Q9NNZ6 103 aa22.26■■□□□ 1.15
CHRNA4-207ENST00000615287 PPP6R1Q9UPN7 881 aa22.26■■□□□ 1.15
CHRNA4-207ENST00000615287 CCDC158Q5M9N0 1113 aa22.26■■□□□ 1.15
CHRNA4-207ENST00000615287 SMC3Q9UQE7 1217 aa22.25■■□□□ 1.15
CHRNA4-207ENST00000615287 AMOTL2Q9Y2J4 779 aa22.25■■□□□ 1.15
CHRNA4-207ENST00000615287 ZNF608Q9ULD9 1512 aaPredicted RBP22.25■■□□□ 1.15
CHRNA4-207ENST00000615287 CDC45O75419 566 aa22.25■■□□□ 1.15
CHRNA4-207ENST00000615287 IKQ13123 557 aaPredicted RBP22.25■■□□□ 1.15
CHRNA4-207ENST00000615287 TTC39AQ5SRH9 613 aa22.25■■□□□ 1.15
CHRNA4-207ENST00000615287 PCF11O94913 1555 aaKnown RBP22.24■■□□□ 1.15
CHRNA4-207ENST00000615287 CCT4P50991 539 aaKnown RBP22.24■■□□□ 1.15
CHRNA4-207ENST00000615287 SRCIN1Q9C0H9 1055 aa22.24■■□□□ 1.15
CHRNA4-207ENST00000615287 SART3Q15020 963 aaKnown RBP22.23■■□□□ 1.15
CHRNA4-207ENST00000615287 CDCA7LQ96GN5 454 aa22.23■■□□□ 1.15
CHRNA4-207ENST00000615287 SLC3A2P08195 630 aaKnown RBP22.23■■□□□ 1.15
CHRNA4-207ENST00000615287 TPM1P09493 284 aa22.23■■□□□ 1.15
CHRNA4-207ENST00000615287 HOOK1Q9UJC3 728 aaKnown RBP22.23■■□□□ 1.15
CHRNA4-207ENST00000615287 VPS37CA5D8V6 355 aaPredicted RBP22.23■■□□□ 1.15
CHRNA4-207ENST00000615287 MTMR7Q9Y216 660 aa22.23■■□□□ 1.15
CHRNA4-207ENST00000615287 NOB1Q9ULX3 412 aaKnown RBP22.22■■□□□ 1.15
CHRNA4-207ENST00000615287 FANCAO15360 1455 aa22.22■■□□□ 1.15
CHRNA4-207ENST00000615287 PHF8Q9UPP1 1060 aa22.22■■□□□ 1.15
CHRNA4-207ENST00000615287 PSMA5P28066 241 aa22.22■■□□□ 1.15
CHRNA4-207ENST00000615287 TSHZ2Q9NRE2 1034 aa22.22■■□□□ 1.15
CHRNA4-207ENST00000615287 FCHSD2O94868 740 aa22.22■■□□□ 1.15
CHRNA4-207ENST00000615287 SKOR2Q2VWA4 1001 aaPredicted RBP22.22■■□□□ 1.15
CHRNA4-207ENST00000615287 MPHOSPH8Q99549 860 aa22.22■■□□□ 1.15
CHRNA4-207ENST00000615287 SLC4A3P48751 1232 aa22.21■■□□□ 1.15
CHRNA4-207ENST00000615287 BRMS1Q9HCU9 246 aa22.21■■□□□ 1.15
CHRNA4-207ENST00000615287 NSD3Q9BZ95 1437 aa22.21■■□□□ 1.15
CHRNA4-207ENST00000615287 HIP1O00291 1037 aa22.21■■□□□ 1.15
CHRNA4-207ENST00000615287 WDR63Q8IWG1 891 aa22.21■■□□□ 1.15
CHRNA4-207ENST00000615287 NAIPQ13075 1403 aa22.2■■□□□ 1.14
CHRNA4-207ENST00000615287 XBP1P17861 261 aa22.2■■□□□ 1.14
CHRNA4-207ENST00000615287 BICD2Q8TD16 824 aa22.2■■□□□ 1.14
CHRNA4-207ENST00000615287 IDI1Q13907 227 aa22.2■■□□□ 1.14
CHRNA4-207ENST00000615287 CCDC57Q2TAC2 916 aa22.2■■□□□ 1.14
CHRNA4-207ENST00000615287 ADAMTS2O95450 1211 aa22.19■■□□□ 1.14
CHRNA4-207ENST00000615287 FOSBP53539 338 aa22.19■■□□□ 1.14
CHRNA4-207ENST00000615287 ABCC5O15440 1437 aa22.19■■□□□ 1.14
CHRNA4-207ENST00000615287 GNAT3A8MTJ3 354 aa22.19■■□□□ 1.14
CHRNA4-207ENST00000615287 STARD3NLO95772 234 aa22.19■■□□□ 1.14
CHRNA4-207ENST00000615287 ANKRD20A12PQ8NF67 263 aa22.18■■□□□ 1.14
CHRNA4-207ENST00000615287 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.18■■□□□ 1.14
CHRNA4-207ENST00000615287 FOXO3O43524 673 aa22.18■■□□□ 1.14
CHRNA4-207ENST00000615287 CT47B1P0C2W7 299 aaPredicted RBP22.18■■□□□ 1.14
CHRNA4-207ENST00000615287 C1orf115Q9H7X2 142 aa22.18■■□□□ 1.14
CHRNA4-207ENST00000615287 PCMTD1Q96MG8 357 aaPredicted RBP22.17■■□□□ 1.14
CHRNA4-207ENST00000615287 SIL1Q9H173 461 aa22.16■■□□□ 1.14
CHRNA4-207ENST00000615287 CCAR1Q8IX12 1150 aaKnown RBP22.16■■□□□ 1.14
CHRNA4-207ENST00000615287 TMOD3Q9NYL9 352 aa22.16■■□□□ 1.14
CHRNA4-207ENST00000615287 BICDL1Q6ZP65 573 aa22.15■■□□□ 1.14
CHRNA4-207ENST00000615287 C22orf23Q9BZE7 217 aa22.15■■□□□ 1.14
CHRNA4-207ENST00000615287 GCC1Q96CN9 775 aa22.15■■□□□ 1.14
CHRNA4-207ENST00000615287 LRPPRCP42704 1394 aaKnown RBP22.15■■□□□ 1.14
CHRNA4-207ENST00000615287 ZNF428Q96B54 188 aa22.15■■□□□ 1.14
CHRNA4-207ENST00000615287 PTPN23Q9H3S7 1636 aa22.15■■□□□ 1.14
CHRNA4-207ENST00000615287 NFE2L2Q16236 605 aa22.15■■□□□ 1.14
CHRNA4-207ENST00000615287 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms