RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 E9PSI1 815 aa21.34■■□□□ 1.01
CNOT3-208ENST00000613073 DLC1Q96QB1 1528 aa21.34■■□□□ 1.01
CNOT3-208ENST00000613073 U2SURPO15042 1029 aaKnown RBP21.33■■□□□ 1.01
CNOT3-208ENST00000613073 FBLN1P23142 703 aa21.33■■□□□ 1.01
CNOT3-208ENST00000613073 NCKAP5LQ9HCH0 1330 aa21.33■■□□□ 1.01
CNOT3-208ENST00000613073 WASLO00401 505 aaPredicted RBP21.32■■□□□ 1
CNOT3-208ENST00000613073 LTKP29376 864 aa21.32■■□□□ 1
CNOT3-208ENST00000613073 NKTRP30414 1462 aaKnown RBP21.3■■□□□ 1
CNOT3-208ENST00000613073 NGEFQ8N5V2 710 aa21.3■■□□□ 1
CNOT3-208ENST00000613073 UBR1Q8IWV7 1749 aa21.3■■□□□ 1
CNOT3-208ENST00000613073 BCAR3O75815 825 aa21.3■■□□□ 1
CNOT3-208ENST00000613073 NLRP1Q9C000 1473 aa21.3■■□□□ 1
CNOT3-208ENST00000613073 SLC26A8Q96RN1 970 aa21.28■■□□□ 1
CNOT3-208ENST00000613073 NUDT16Q96DE0 195 aaKnown RBP21.27■■□□□ 1
CNOT3-208ENST00000613073 PPIP5K1Q6PFW1 1433 aa21.27■□□□□ 0.99
CNOT3-208ENST00000613073 NUTM2FA1L443 756 aa21.25■□□□□ 0.99
CNOT3-208ENST00000613073 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.25■□□□□ 0.99
CNOT3-208ENST00000613073 DAXXQ9UER7 740 aaPredicted RBP21.25■□□□□ 0.99
CNOT3-208ENST00000613073 IQSEC2Q5JU85 1478 aa21.25■□□□□ 0.99
CNOT3-208ENST00000613073 ROBO2Q9HCK4 1378 aa21.24■□□□□ 0.99
CNOT3-208ENST00000613073 ADAMTS13Q76LX8 1427 aa21.24■□□□□ 0.99
CNOT3-208ENST00000613073 ZRANB1Q9UGI0 708 aa21.24■□□□□ 0.99
CNOT3-208ENST00000613073 NME9Q86XW9 330 aa21.23■□□□□ 0.99
CNOT3-208ENST00000613073 MED14O60244 1454 aa21.23■□□□□ 0.99
CNOT3-208ENST00000613073 DDRGK1Q96HY6 314 aa21.23■□□□□ 0.99
CNOT3-208ENST00000613073 ANKRD26Q9UPS8 1709 aa21.23■□□□□ 0.99
CNOT3-208ENST00000613073 ATP7BP35670 1465 aa21.22■□□□□ 0.99
CNOT3-208ENST00000613073 DIAPH1O60610 1272 aaKnown RBP21.22■□□□□ 0.99
CNOT3-208ENST00000613073 MS4A1P11836 297 aa21.22■□□□□ 0.99
CNOT3-208ENST00000613073 PHF23Q9BUL5 403 aaPredicted RBP21.22■□□□□ 0.99
CNOT3-208ENST00000613073 EID1Q9Y6B2 187 aa21.22■□□□□ 0.99
CNOT3-208ENST00000613073 CCDC61Q9Y6R9 512 aa21.22■□□□□ 0.99
CNOT3-208ENST00000613073 FAM135BQ49AJ0 1406 aa21.21■□□□□ 0.99
CNOT3-208ENST00000613073 KIF20BQ96Q89 1820 aa21.21■□□□□ 0.99
CNOT3-208ENST00000613073 COL3A1P02461 1466 aaPredicted RBP21.2■□□□□ 0.99
CNOT3-208ENST00000613073 TECPR2O15040 1411 aa21.2■□□□□ 0.98
CNOT3-208ENST00000613073 POLKQ9UBT6 870 aa21.2■□□□□ 0.98
CNOT3-208ENST00000613073 PRR36Q9H6K5 1346 aa21.2■□□□□ 0.98
CNOT3-208ENST00000613073 FRAT2O75474 233 aaPredicted RBP21.19■□□□□ 0.98
CNOT3-208ENST00000613073 WDR63Q8IWG1 891 aa21.19■□□□□ 0.98
CNOT3-208ENST00000613073 SIRT1Q96EB6 747 aa21.19■□□□□ 0.98
CNOT3-208ENST00000613073 PLEKHF1Q96S99 279 aa21.19■□□□□ 0.98
CNOT3-208ENST00000613073 PLEKHG1Q9ULL1 1385 aa21.19■□□□□ 0.98
CNOT3-208ENST00000613073 C3P01024 1663 aa21.19■□□□□ 0.98
CNOT3-208ENST00000613073 CPSF1Q10570 1443 aaKnown RBP21.18■□□□□ 0.98
CNOT3-208ENST00000613073 MAPK8IP3Q9UPT6 1336 aa21.18■□□□□ 0.98
CNOT3-208ENST00000613073 CCDC27Q2M243 656 aa21.18■□□□□ 0.98
CNOT3-208ENST00000613073 EMILIN1Q9Y6C2 1016 aa21.17■□□□□ 0.98
CNOT3-208ENST00000613073 KNDC1Q76NI1 1749 aa21.17■□□□□ 0.98
CNOT3-208ENST00000613073 CPS1P31327 1500 aa21.17■□□□□ 0.98
CNOT3-208ENST00000613073 EDC4Q6P2E9 1401 aaKnown RBP21.16■□□□□ 0.98
CNOT3-208ENST00000613073 CANXP27824 592 aaKnown RBP21.16■□□□□ 0.98
CNOT3-208ENST00000613073 TMPOP42166 694 aaKnown RBP21.16■□□□□ 0.98
CNOT3-208ENST00000613073 BCL2L13Q9BXK5 485 aa21.16■□□□□ 0.98
CNOT3-208ENST00000613073 RSPH6AQ9H0K4 717 aa21.15■□□□□ 0.98
CNOT3-208ENST00000613073 FER1L4A9Z1Z3 1794 aa21.15■□□□□ 0.98
CNOT3-208ENST00000613073 PNPLA6Q8IY17 1366 aa21.15■□□□□ 0.98
CNOT3-208ENST00000613073 PKNOX2Q96KN3 472 aa21.14■□□□□ 0.98
CNOT3-208ENST00000613073 TSR2Q969E8 191 aaKnown RBP21.14■□□□□ 0.97
CNOT3-208ENST00000613073 AMOTL2Q9Y2J4 779 aa21.14■□□□□ 0.97
CNOT3-208ENST00000613073 PTPRUQ92729 1446 aa21.14■□□□□ 0.97
CNOT3-208ENST00000613073 RRS1Q15050 365 aaKnown RBP21.13■□□□□ 0.97
CNOT3-208ENST00000613073 COG3Q96JB2 828 aa21.13■□□□□ 0.97
CNOT3-208ENST00000613073 TRIM35Q9UPQ4 493 aa21.13■□□□□ 0.97
CNOT3-208ENST00000613073 MAP2P11137 1827 aaKnown RBP21.12■□□□□ 0.97
CNOT3-208ENST00000613073 HMOX1P09601 288 aa21.12■□□□□ 0.97
CNOT3-208ENST00000613073 RARSP54136 660 aaKnown RBP21.12■□□□□ 0.97
CNOT3-208ENST00000613073 RIPK4P57078 832 aa21.12■□□□□ 0.97
CNOT3-208ENST00000613073 THEMISQ8N1K5 641 aaPredicted RBP21.12■□□□□ 0.97
CNOT3-208ENST00000613073 MYH16Q9H6N6 1097 aa21.12■□□□□ 0.97
CNOT3-208ENST00000613073 PANK1Q8TE04 598 aa21.12■□□□□ 0.97
CNOT3-208ENST00000613073 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.12■□□□□ 0.97
CNOT3-208ENST00000613073 ADGRB2O60241 1585 aa21.12■□□□□ 0.97
CNOT3-208ENST00000613073 CDC42BPGQ6DT37 1551 aa21.11■□□□□ 0.97
CNOT3-208ENST00000613073 PRKAR2BP31323 418 aa21.1■□□□□ 0.97
CNOT3-208ENST00000613073 FAM43AQ8N2R8 423 aa21.1■□□□□ 0.97
CNOT3-208ENST00000613073 COG6Q9Y2V7 657 aa21.09■□□□□ 0.97
CNOT3-208ENST00000613073 ACEP12821 1306 aa21.09■□□□□ 0.97
CNOT3-208ENST00000613073 ZNF692Q9BU19 519 aaPredicted RBP21.09■□□□□ 0.97
CNOT3-208ENST00000613073 ARXQ96QS3 562 aa21.08■□□□□ 0.97
CNOT3-208ENST00000613073 FCHSD2O94868 740 aa21.08■□□□□ 0.96
CNOT3-208ENST00000613073 TNNQ9UQP3 1299 aa21.08■□□□□ 0.96
CNOT3-208ENST00000613073 KDM2BQ8NHM5 1336 aa21.07■□□□□ 0.96
CNOT3-208ENST00000613073 TBX22Q9Y458 520 aa21.07■□□□□ 0.96
CNOT3-208ENST00000613073 SLIT1O75093 1534 aa21.07■□□□□ 0.96
CNOT3-208ENST00000613073 NCBP3Q53F19 620 aaKnown RBP21.06■□□□□ 0.96
CNOT3-208ENST00000613073 PMFBP1Q8TBY8 1022 aa21.06■□□□□ 0.96
CNOT3-208ENST00000613073 PNNQ9H307 717 aaKnown RBP21.06■□□□□ 0.96
CNOT3-208ENST00000613073 ARHGAP23Q9P227 1491 aa21.06■□□□□ 0.96
CNOT3-208ENST00000613073 PDE3AQ14432 1141 aa21.06■□□□□ 0.96
CNOT3-208ENST00000613073 PHACTR3Q96KR7 559 aa21.06■□□□□ 0.96
CNOT3-208ENST00000613073 EXOSC9Q06265 439 aaKnown RBP21.05■□□□□ 0.96
CNOT3-208ENST00000613073 MON2Q7Z3U7 1717 aa21.05■□□□□ 0.96
CNOT3-208ENST00000613073 SOX12O15370 315 aa21.05■□□□□ 0.96
CNOT3-208ENST00000613073 CENPQQ7L2Z9 268 aaPredicted RBP21.05■□□□□ 0.96
CNOT3-208ENST00000613073 CLUAP1Q96AJ1 413 aa21.05■□□□□ 0.96
CNOT3-208ENST00000613073 ITSN1Q15811 1721 aa21.05■□□□□ 0.96
CNOT3-208ENST00000613073 IL13P35225 146 aa21.04■□□□□ 0.96
CNOT3-208ENST00000613073 LRRC7Q96NW7 1537 aa21.04■□□□□ 0.96
CNOT3-208ENST00000613073 TTC21BQ7Z4L5 1316 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms