RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 SIGLEC1Q9BZZ2 1709 aa15.16■□□□□ 0.02
TP53-220ENST00000610623 IGHDP01880 384 aa15.16■□□□□ 0.02
TP53-220ENST00000610623 WDR43Q15061 677 aaKnown RBP eCLIP15.16■□□□□ 0.02
TP53-220ENST00000610623 NKX1-1Q15270 411 aaPredicted RBP15.16■□□□□ 0.02
TP53-220ENST00000610623 TBC1D32Q96NH3 1257 aa15.16■□□□□ 0.02
TP53-220ENST00000610623 TBC1D2Q9BYX2 928 aa15.16■□□□□ 0.02
TP53-220ENST00000610623 PDCL3Q9H2J4 239 aa15.16■□□□□ 0.02
TP53-220ENST00000610623 PANK3Q9H999 370 aa15.16■□□□□ 0.02
TP53-220ENST00000610623 NINLQ9Y2I6 1382 aa15.15■□□□□ 0.02
TP53-220ENST00000610623 REREQ9P2R6 1566 aa15.15■□□□□ 0.02
TP53-220ENST00000610623 NKTRP30414 1462 aaKnown RBP15.15■□□□□ 0.02
TP53-220ENST00000610623 CFAP65Q6ZU64 1925 aaKnown RBP15.15■□□□□ 0.02
TP53-220ENST00000610623 TRAK2O60296 914 aa15.15■□□□□ 0.02
TP53-220ENST00000610623 PDE3AQ14432 1141 aa15.15■□□□□ 0.02
TP53-220ENST00000610623 MYOM1P52179 1685 aa15.14■□□□□ 0.01
TP53-220ENST00000610623 GRPEL1Q9HAV7 217 aa15.14■□□□□ 0.01
TP53-220ENST00000610623 ADGRF5Q8IZF2 1346 aa15.13■□□□□ 0.01
TP53-220ENST00000610623 YEATS2Q9ULM3 1422 aa15.13■□□□□ 0.01
TP53-220ENST00000610623 CHMP5Q9NZZ3 219 aa15.13■□□□□ 0.01
TP53-220ENST00000610623 AAMPQ13685 434 aa15.12■□□□□ 0.01
TP53-220ENST00000610623 PIK3C2GO75747 1445 aa15.12■□□□□ 0.01
TP53-220ENST00000610623 GZF1Q9H116 711 aaPredicted RBP15.12■□□□□ 0.01
TP53-220ENST00000610623 CLUAP1Q96AJ1 413 aa15.11■□□□□ 0.01
TP53-220ENST00000610623 ZBTB12Q9Y330 459 aaPredicted RBP15.11■□□□□ 0.01
TP53-220ENST00000610623 SBNO2Q9Y2G9 1366 aa15.11■□□□□ 0.01
TP53-220ENST00000610623 DDX11L8A8MPP1 907 aa15.11■□□□□ 0.01
TP53-220ENST00000610623 FAM69CQ0P6D2 419 aa15.11■□□□□ 0.01
TP53-220ENST00000610623 CFAP70Q5T0N1 1121 aa15.11■□□□□ 0.01
TP53-220ENST00000610623 TRIM44Q96DX7 344 aaPredicted RBP15.11■□□□□ 0.01
TP53-220ENST00000610623 PREX1Q8TCU6 1659 aa15.11■□□□□ 0.01
TP53-220ENST00000610623 TSPOAP1O95153 1857 aa15.11■□□□□ 0.01
TP53-220ENST00000610623 AGLP35573 1532 aa15.09■□□□□ 0.01
TP53-220ENST00000610623 PPP2R1AP30153 589 aa15.09■□□□□ 0.01
TP53-220ENST00000610623 NGEFQ8N5V2 710 aa15.09■□□□□ 0.01
TP53-220ENST00000610623 E9PSI1 815 aa15.09■□□□□ 0.01
TP53-220ENST00000610623 BCAR3O75815 825 aa15.09■□□□□ 0.01
TP53-220ENST00000610623 PMFBP1Q8TBY8 1022 aa15.09■□□□□ 0.01
TP53-220ENST00000610623 NEXMIFQ5QGS0 1516 aa15.08■□□□□ 0.01
TP53-220ENST00000610623 ASXL1Q8IXJ9 1541 aa15.08■□□□□ 0
TP53-220ENST00000610623 ERVK-7P63135 1459 aa15.08■□□□□ 0
TP53-220ENST00000610623 ERBB4Q15303 1308 aa15.08■□□□□ 0
TP53-220ENST00000610623 CALD1Q05682 793 aaKnown RBP15.08■□□□□ 0
TP53-220ENST00000610623 NPC1L1Q9UHC9 1359 aa15.07■□□□□ 0
TP53-220ENST00000610623 ADGRB1O14514 1584 aa15.07■□□□□ 0
TP53-220ENST00000610623 C14orf93Q9H972 538 aaKnown RBP15.07■□□□□ 0
TP53-220ENST00000610623 QRICH2Q9H0J4 1663 aa15.07■□□□□ 0
TP53-220ENST00000610623 SLC52A1Q9NWF4 448 aa15.06■□□□□ 0
TP53-220ENST00000610623 KNSTRNQ9Y448 316 aa15.06■□□□□ 0
TP53-220ENST00000610623 ZFYVE9O95405 1425 aa15.06■□□□□ 0
TP53-220ENST00000610623 TERF1P54274 439 aa15.04■□□□□ -0
TP53-220ENST00000610623 SSUH2Q9Y2M2 353 aa15.04■□□□□ -0
TP53-220ENST00000610623 KIF13AQ9H1H9 1805 aa15.04■□□□□ -0
TP53-220ENST00000610623 TMEM131LA2VDJ0 1609 aa15.04■□□□□ -0
TP53-220ENST00000610623 VGFO15240 615 aaPredicted RBP15.04■□□□□ -0
TP53-220ENST00000610623 GTPBP6O43824 516 aaPredicted RBP15.04■□□□□ -0
TP53-220ENST00000610623 PTMSP20962 102 aa15.02■□□□□ -0
TP53-220ENST00000610623 MYO5BQ9ULV0 1848 aa15.02□□□□□ -0.01
TP53-220ENST00000610623 ARHGEF40Q8TER5 1519 aa15.02□□□□□ -0.01
TP53-220ENST00000610623 SKOR2Q2VWA4 1001 aaPredicted RBP15.01□□□□□ -0.01
TP53-220ENST00000610623 MAP7D2Q96T17 732 aa15.01□□□□□ -0.01
TP53-220ENST00000610623 COG6Q9Y2V7 657 aa15.01□□□□□ -0.01
TP53-220ENST00000610623 ARHGEF28Q8N1W1 1705 aaKnown RBP15.01□□□□□ -0.01
TP53-220ENST00000610623 CANXP27824 592 aaKnown RBP15.01□□□□□ -0.01
TP53-220ENST00000610623 KIAA1211Q6ZU35 1233 aa15.01□□□□□ -0.01
TP53-220ENST00000610623 C22orf23Q9BZE7 217 aa15□□□□□ -0.01
TP53-220ENST00000610623 CLTCQ00610 1675 aaKnown RBP14.99□□□□□ -0.01
TP53-220ENST00000610623 APAF1O14727 1248 aa14.99□□□□□ -0.01
TP53-220ENST00000610623 CCDC173Q0VFZ6 552 aa14.99□□□□□ -0.01
TP53-220ENST00000610623 PDZRN3Q9UPQ7 1066 aa14.99□□□□□ -0.01
TP53-220ENST00000610623 IDI1Q13907 227 aa14.99□□□□□ -0.01
TP53-220ENST00000610623 PANK1Q8TE04 598 aa14.99□□□□□ -0.01
TP53-220ENST00000610623 NCOA3Q9Y6Q9 1424 aa14.98□□□□□ -0.01
TP53-220ENST00000610623 OFD1O75665 1012 aa14.98□□□□□ -0.01
TP53-220ENST00000610623 HSCBQ8IWL3 235 aa14.98□□□□□ -0.01
TP53-220ENST00000610623 RWDD1Q9H446 243 aaPredicted RBP14.98□□□□□ -0.01
TP53-220ENST00000610623 DDIT3P35638 169 aa14.98□□□□□ -0.01
TP53-220ENST00000610623 PPP1R9BQ96SB3 815 aa14.98□□□□□ -0.01
TP53-220ENST00000610623 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.97□□□□□ -0.01
TP53-220ENST00000610623 ZSCAN30Q86W11 494 aa14.97□□□□□ -0.01
TP53-220ENST00000610623 GBP4Q96PP9 640 aa14.97□□□□□ -0.01
TP53-220ENST00000610623 PUS7Q96PZ0 661 aaKnown RBP14.97□□□□□ -0.01
TP53-220ENST00000610623 PRDM4Q9UKN5 801 aa14.97□□□□□ -0.01
TP53-220ENST00000610623 CCDC146Q8IYE0 955 aa14.97□□□□□ -0.01
TP53-220ENST00000610623 USP32Q8NFA0 1604 aa14.96□□□□□ -0.01
TP53-220ENST00000610623 SPATA31D1Q6ZQQ2 1576 aa14.96□□□□□ -0.01
TP53-220ENST00000610623 BRPF1P55201 1214 aaPredicted RBP14.96□□□□□ -0.01
TP53-220ENST00000610623 GAS2L3Q86XJ1 694 aa14.95□□□□□ -0.02
TP53-220ENST00000610623 TRAK1Q9UPV9 953 aa14.95□□□□□ -0.02
TP53-220ENST00000610623 PCDHB15Q9Y5E8 787 aa14.95□□□□□ -0.02
TP53-220ENST00000610623 ANP32BQ92688 251 aaKnown RBP14.94□□□□□ -0.02
TP53-220ENST00000610623 SNX21Q969T3 373 aa14.94□□□□□ -0.02
TP53-220ENST00000610623 RNF39Q9H2S5 420 aa14.94□□□□□ -0.02
TP53-220ENST00000610623 SPDYE2BA6NHP3 402 aa14.93□□□□□ -0.02
TP53-220ENST00000610623 SPDYE6P0CI01 402 aa14.93□□□□□ -0.02
TP53-220ENST00000610623 SPDYE2Q495Y8 402 aa14.93□□□□□ -0.02
TP53-220ENST00000610623 SMC5Q8IY18 1101 aa14.93□□□□□ -0.02
TP53-220ENST00000610623 MSNP26038 577 aaKnown RBP14.92□□□□□ -0.02
TP53-220ENST00000610623 HS1BP3Q53T59 392 aa14.92□□□□□ -0.02
TP53-220ENST00000610623 TMEM132EQ6IEE7 984 aa14.92□□□□□ -0.02
TP53-220ENST00000610623 MTERF4Q7Z6M4 381 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms