RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 NBPF1Q3BBV0 1214 aa15.57■□□□□ 0.08
CTCFL-218ENST00000608440 KIAA2012Q0VF49 1180 aa15.56■□□□□ 0.08
CTCFL-218ENST00000608440 BCL2L12Q9HB09 334 aa15.56■□□□□ 0.08
CTCFL-218ENST00000608440 KIF3AQ9Y496 699 aa15.56■□□□□ 0.08
CTCFL-218ENST00000608440 BLMP54132 1417 aaPredicted RBP15.56■□□□□ 0.08
CTCFL-218ENST00000608440 MAGI2Q86UL8 1455 aa15.56■□□□□ 0.08
CTCFL-218ENST00000608440 CHRM1P11229 460 aaPredicted RBP15.56■□□□□ 0.08
CTCFL-218ENST00000608440 PTMSP20962 102 aa15.56■□□□□ 0.08
CTCFL-218ENST00000608440 ZSCAN23Q3MJ62 389 aa15.56■□□□□ 0.08
CTCFL-218ENST00000608440 CHMP4CQ96CF2 233 aa15.56■□□□□ 0.08
CTCFL-218ENST00000608440 DNAJC2Q99543 621 aaKnown RBP15.56■□□□□ 0.08
CTCFL-218ENST00000608440 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.55■□□□□ 0.08
CTCFL-218ENST00000608440 PARD3Q8TEW0 1356 aa15.55■□□□□ 0.08
CTCFL-218ENST00000608440 IQGAP3Q86VI3 1631 aa15.55■□□□□ 0.08
CTCFL-218ENST00000608440 ZMYM4Q5VZL5 1548 aa15.55■□□□□ 0.08
CTCFL-218ENST00000608440 KIF3BO15066 747 aa15.54■□□□□ 0.08
CTCFL-218ENST00000608440 HECW2Q9P2P5 1572 aa15.54■□□□□ 0.08
CTCFL-218ENST00000608440 TSPOAP1O95153 1857 aa15.54■□□□□ 0.08
CTCFL-218ENST00000608440 TRIM6-TRIM34B2RNG4 842 aa15.53■□□□□ 0.08
CTCFL-218ENST00000608440 ZNF445P59923 1031 aa15.53■□□□□ 0.08
CTCFL-218ENST00000608440 C17orf53Q8N3J3 647 aaPredicted RBP15.53■□□□□ 0.08
CTCFL-218ENST00000608440 TRIM34Q9BYJ4 488 aa15.53■□□□□ 0.08
CTCFL-218ENST00000608440 SPINK5Q9NQ38 1064 aaPredicted RBP15.53■□□□□ 0.08
CTCFL-218ENST00000608440 SMC5Q8IY18 1101 aa15.53■□□□□ 0.08
CTCFL-218ENST00000608440 RNF214Q8ND24 703 aa15.53■□□□□ 0.08
CTCFL-218ENST00000608440 TRERF1Q96PN7 1200 aa15.53■□□□□ 0.08
CTCFL-218ENST00000608440 MCTP1Q6DN14 999 aa15.52■□□□□ 0.08
CTCFL-218ENST00000608440 PRIMPOLQ96LW4 560 aa15.52■□□□□ 0.08
CTCFL-218ENST00000608440 CIZ1Q9ULV3 898 aaPredicted RBP15.52■□□□□ 0.08
CTCFL-218ENST00000608440 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.52■□□□□ 0.089e-7■■□□□ 11.8
CTCFL-218ENST00000608440 CGNL1Q0VF96 1302 aa15.52■□□□□ 0.08
CTCFL-218ENST00000608440 MLH3Q9UHC1 1453 aa15.52■□□□□ 0.08
CTCFL-218ENST00000608440 HMGN5P82970 282 aaKnown RBP15.52■□□□□ 0.07
CTCFL-218ENST00000608440 RBM27Q9P2N5 1060 aaKnown RBP15.52■□□□□ 0.07
CTCFL-218ENST00000608440 PCDHB15Q9Y5E8 787 aa15.52■□□□□ 0.07
CTCFL-218ENST00000608440 A2MP01023 1474 aa15.51■□□□□ 0.07
CTCFL-218ENST00000608440 SLFN5Q08AF3 891 aa15.51■□□□□ 0.07
CTCFL-218ENST00000608440 IBTKQ9P2D0 1353 aaPredicted RBP15.51■□□□□ 0.07
CTCFL-218ENST00000608440 BAG4O95429 457 aaKnown RBP15.51■□□□□ 0.07
CTCFL-218ENST00000608440 NCOA3Q9Y6Q9 1424 aa15.5■□□□□ 0.07
CTCFL-218ENST00000608440 ABCA6Q8N139 1617 aa15.5■□□□□ 0.07
CTCFL-218ENST00000608440 GTF2F1P35269 517 aaKnown RBP eCLIP15.5■□□□□ 0.07
CTCFL-218ENST00000608440 RBM25P49756 843 aaKnown RBP15.49■□□□□ 0.07
CTCFL-218ENST00000608440 PPRC1Q5VV67 1664 aaKnown RBP15.49■□□□□ 0.07
CTCFL-218ENST00000608440 DEPDC5O75140 1603 aa15.49■□□□□ 0.07
CTCFL-218ENST00000608440 FRMPD1Q5SYB0 1578 aa15.49■□□□□ 0.07
CTCFL-218ENST00000608440 TIGD1Q96MW7 591 aa15.49■□□□□ 0.07
CTCFL-218ENST00000608440 RICTORQ6R327 1708 aa15.49■□□□□ 0.07
CTCFL-218ENST00000608440 CAPN2P17655 700 aa15.48■□□□□ 0.07
CTCFL-218ENST00000608440 WDR43Q15061 677 aaKnown RBP eCLIP15.48■□□□□ 0.07
CTCFL-218ENST00000608440 ERICH4A6NGS2 130 aa15.48■□□□□ 0.07
CTCFL-218ENST00000608440 CCDC146Q8IYE0 955 aa15.48■□□□□ 0.07
CTCFL-218ENST00000608440 PMFBP1Q8TBY8 1022 aa15.48■□□□□ 0.07
CTCFL-218ENST00000608440 PLA2R1Q13018 1463 aa15.47■□□□□ 0.07
CTCFL-218ENST00000608440 EIF2AK4Q9P2K8 1649 aaKnown RBP15.47■□□□□ 0.07
CTCFL-218ENST00000608440 VGFO15240 615 aaPredicted RBP15.47■□□□□ 0.07
CTCFL-218ENST00000608440 CD2BP2O95400 341 aaKnown RBP15.47■□□□□ 0.07
CTCFL-218ENST00000608440 NGEFQ8N5V2 710 aa15.47■□□□□ 0.07
CTCFL-218ENST00000608440 KDM2AQ9Y2K7 1162 aa15.47■□□□□ 0.07
CTCFL-218ENST00000608440 CCDC144AA2RUR9 1427 aa15.47■□□□□ 0.07
CTCFL-218ENST00000608440 YEATS2Q9ULM3 1422 aa15.47■□□□□ 0.07
CTCFL-218ENST00000608440 NOLC1Q14978 699 aaKnown RBP eCLIP15.47■□□□□ 0.07
CTCFL-218ENST00000608440 KANK1Q14678 1352 aa15.47■□□□□ 0.07
CTCFL-218ENST00000608440 MROH1Q8NDA8 1641 aa15.47■□□□□ 0.07
CTCFL-218ENST00000608440 CCDC66A2RUB6 948 aa15.46■□□□□ 0.07
CTCFL-218ENST00000608440 SLC20A2Q08357 652 aa15.46■□□□□ 0.07
CTCFL-218ENST00000608440 KIF13AQ9H1H9 1805 aa15.46■□□□□ 0.07
CTCFL-218ENST00000608440 PRDM15P57071 1507 aaPredicted RBP15.46■□□□□ 0.07
CTCFL-218ENST00000608440 SYCE3A1L190 88 aa15.45■□□□□ 0.06
CTCFL-218ENST00000608440 PER1O15534 1290 aaPredicted RBP15.45■□□□□ 0.06
CTCFL-218ENST00000608440 SLFN14P0C7P3 912 aa15.45■□□□□ 0.06
CTCFL-218ENST00000608440 DIP2CQ9Y2E4 1556 aa15.45■□□□□ 0.06
CTCFL-218ENST00000608440 ZNF521Q96K83 1311 aa15.45■□□□□ 0.06
CTCFL-218ENST00000608440 PDE3AQ14432 1141 aa15.45■□□□□ 0.06
CTCFL-218ENST00000608440 SNX21Q969T3 373 aa15.45■□□□□ 0.06
CTCFL-218ENST00000608440 TNNQ9UQP3 1299 aa15.45■□□□□ 0.06
CTCFL-218ENST00000608440 RNF216Q9NWF9 866 aaPredicted RBP15.44■□□□□ 0.06
CTCFL-218ENST00000608440 OGFRQ9NZT2 677 aa15.44■□□□□ 0.06
CTCFL-218ENST00000608440 GGT6Q6P531 493 aa15.43■□□□□ 0.06
CTCFL-218ENST00000608440 VWDEQ8N2E2 1590 aa15.43■□□□□ 0.06
CTCFL-218ENST00000608440 GAS2L2Q8NHY3 880 aa15.43■□□□□ 0.06
CTCFL-218ENST00000608440 TTC12Q9H892 705 aaPredicted RBP15.43■□□□□ 0.06
CTCFL-218ENST00000608440 RBM42Q9BTD8 480 aaKnown RBP15.43■□□□□ 0.06
CTCFL-218ENST00000608440 E9PCH4 1651 aa15.43■□□□□ 0.06
CTCFL-218ENST00000608440 PRPF40AO75400 957 aaKnown RBP15.42■□□□□ 0.06
CTCFL-218ENST00000608440 PIBF1Q8WXW3 757 aa15.42■□□□□ 0.06
CTCFL-218ENST00000608440 LMBRD1Q9NUN5 540 aa15.42■□□□□ 0.06
CTCFL-218ENST00000608440 RIOK3O14730 519 aaKnown RBP15.42■□□□□ 0.06
CTCFL-218ENST00000608440 GABPB1Q06547 395 aaPredicted RBP15.42■□□□□ 0.06
CTCFL-218ENST00000608440 FEZ1Q99689 392 aa15.42■□□□□ 0.06
CTCFL-218ENST00000608440 SLC52A1Q9NWF4 448 aa15.42■□□□□ 0.06
CTCFL-218ENST00000608440 RWDD1Q9H446 243 aaPredicted RBP15.41■□□□□ 0.06
CTCFL-218ENST00000608440 TET3O43151 1660 aa15.41■□□□□ 0.06
CTCFL-218ENST00000608440 RNF17Q9BXT8 1623 aaKnown RBP15.41■□□□□ 0.06
CTCFL-218ENST00000608440 RGL3Q3MIN7 710 aa15.4■□□□□ 0.06
CTCFL-218ENST00000608440 ANKRD7Q92527 254 aa15.4■□□□□ 0.06
CTCFL-218ENST00000608440 HDAC5Q9UQL6 1122 aa15.4■□□□□ 0.06
CTCFL-218ENST00000608440 DMRT2Q9Y5R5 561 aa15.4■□□□□ 0.06
CTCFL-218ENST00000608440 ATP10AO60312 1499 aa15.4■□□□□ 0.06
CTCFL-218ENST00000608440 NKTRP30414 1462 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms