RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 CCDC61Q9Y6R9 512 aa31.66■■■□□ 2.66
TMEM248-207ENST00000607045 ATP7BP35670 1465 aa31.65■■■□□ 2.66
TMEM248-207ENST00000607045 PLCH1Q4KWH8 1693 aa31.65■■■□□ 2.66
TMEM248-207ENST00000607045 ALS2Q96Q42 1657 aa31.65■■■□□ 2.66
TMEM248-207ENST00000607045 NBPF8Q3BBV2 869 aa31.65■■■□□ 2.66
TMEM248-207ENST00000607045 ARHGEF28Q8N1W1 1705 aaKnown RBP31.65■■■□□ 2.66
TMEM248-207ENST00000607045 ACEP12821 1306 aa31.64■■■□□ 2.66
TMEM248-207ENST00000607045 A0A0G2JS52 829 aa31.63■■■□□ 2.65
TMEM248-207ENST00000607045 MYT1Q01538 1121 aa31.63■■■□□ 2.65
TMEM248-207ENST00000607045 NWD2Q9ULI1 1742 aa31.63■■■□□ 2.65
TMEM248-207ENST00000607045 BRWD3Q6RI45 1802 aa31.63■■■□□ 2.65
TMEM248-207ENST00000607045 PLEKHG3A1L390 1219 aa31.62■■■□□ 2.65
TMEM248-207ENST00000607045 BLMP54132 1417 aaPredicted RBP31.62■■■□□ 2.65
TMEM248-207ENST00000607045 PRDM11Q9NQV5 511 aa31.62■■■□□ 2.65
TMEM248-207ENST00000607045 CHRNA2Q15822 529 aa31.6■■■□□ 2.65
TMEM248-207ENST00000607045 ZC3H6P61129 1189 aaKnown RBP31.59■■■□□ 2.65
TMEM248-207ENST00000607045 L3MBTL2Q969R5 705 aa31.59■■■□□ 2.65
TMEM248-207ENST00000607045 SIN3AQ96ST3 1273 aa31.59■■■□□ 2.65
TMEM248-207ENST00000607045 SPATA31A5Q5VU36 1347 aa31.58■■■□□ 2.65
TMEM248-207ENST00000607045 SPATA31A7Q8IWB4 1347 aa31.58■■■□□ 2.65
TMEM248-207ENST00000607045 POLR3AO14802 1390 aaPredicted RBP31.56■■■□□ 2.64
TMEM248-207ENST00000607045 KIAA0232Q92628 1395 aa31.56■■■□□ 2.64
TMEM248-207ENST00000607045 SF3B2Q13435 895 aaKnown RBP31.56■■■□□ 2.64
TMEM248-207ENST00000607045 CABP2Q9NPB3 220 aa31.56■■■□□ 2.64
TMEM248-207ENST00000607045 SRPK2P78362 688 aaKnown RBP31.55■■■□□ 2.64
TMEM248-207ENST00000607045 FAM182BQ5T319 152 aa31.55■■■□□ 2.64
TMEM248-207ENST00000607045 COL14A1Q05707 1796 aaKnown RBP31.53■■■□□ 2.64
TMEM248-207ENST00000607045 CENPJQ9HC77 1338 aaPredicted RBP31.53■■■□□ 2.64
TMEM248-207ENST00000607045 ABTB2Q8N961 1025 aa31.53■■■□□ 2.64
TMEM248-207ENST00000607045 NRAPQ86VF7 1730 aa31.52■■■□□ 2.64
TMEM248-207ENST00000607045 STRN4Q9NRL3 753 aa31.52■■■□□ 2.64
TMEM248-207ENST00000607045 KIAA1210Q9ULL0 1709 aa31.52■■■□□ 2.64
TMEM248-207ENST00000607045 NEUROD1Q13562 356 aa31.49■■■□□ 2.63
TMEM248-207ENST00000607045 ITSN1Q15811 1721 aa31.48■■■□□ 2.63
TMEM248-207ENST00000607045 CRYBG1Q9Y4K1 1723 aa31.48■■■□□ 2.63
TMEM248-207ENST00000607045 SPATA31A1Q5TZJ5 1347 aa31.48■■■□□ 2.63
TMEM248-207ENST00000607045 CABP1Q9NZU7 370 aa31.47■■■□□ 2.63
TMEM248-207ENST00000607045 PPIP5K1Q6PFW1 1433 aa31.45■■■□□ 2.63
TMEM248-207ENST00000607045 EVA1CP58658 441 aa31.44■■■□□ 2.62
TMEM248-207ENST00000607045 USP35Q9P2H5 1018 aa31.44■■■□□ 2.62
TMEM248-207ENST00000607045 TOPAZ1Q8N9V7 1692 aa31.41■■■□□ 2.62
TMEM248-207ENST00000607045 BAG6P46379 1132 aa31.41■■■□□ 2.62
TMEM248-207ENST00000607045 NLRP13Q86W25 1043 aa31.41■■■□□ 2.62
TMEM248-207ENST00000607045 GCP02774 474 aa31.4■■■□□ 2.62
TMEM248-207ENST00000607045 EN1Q05925 392 aaPredicted RBP31.4■■■□□ 2.62
TMEM248-207ENST00000607045 LARP1Q6PKG0 1096 aaKnown RBP31.39■■■□□ 2.62
TMEM248-207ENST00000607045 USP19O94966 1318 aa31.39■■■□□ 2.62
TMEM248-207ENST00000607045 PHRF1Q9P1Y6 1649 aaKnown RBP31.36■■■□□ 2.61
TMEM248-207ENST00000607045 CPDO75976 1380 aa31.34■■■□□ 2.61
TMEM248-207ENST00000607045 NLRP6P59044 892 aa31.34■■■□□ 2.61
TMEM248-207ENST00000607045 CAMTA1Q9Y6Y1 1673 aa31.34■■■□□ 2.61
TMEM248-207ENST00000607045 PSDA5PKW4 1024 aaPredicted RBP31.33■■■□□ 2.61
TMEM248-207ENST00000607045 SSH2Q76I76 1423 aa31.32■■■□□ 2.61
TMEM248-207ENST00000607045 EVC2Q86UK5 1308 aa31.32■■■□□ 2.6
TMEM248-207ENST00000607045 BARGINQ6ZT62 677 aa31.32■■■□□ 2.6
TMEM248-207ENST00000607045 THSD7AQ9UPZ6 1657 aa31.32■■■□□ 2.6
TMEM248-207ENST00000607045 ZBTB7CA1YPR0 619 aa31.31■■■□□ 2.6
TMEM248-207ENST00000607045 TRIM37O94972 964 aa31.31■■■□□ 2.6
TMEM248-207ENST00000607045 FAM196AQ6ZSG2 479 aa31.3■■■□□ 2.6
TMEM248-207ENST00000607045 ROCK2O75116 1388 aaKnown RBP31.3■■■□□ 2.6
TMEM248-207ENST00000607045 TCP11L2Q8N4U5 519 aa31.29■■■□□ 2.6
TMEM248-207ENST00000607045 USP6P35125 1406 aa31.28■■■□□ 2.6
TMEM248-207ENST00000607045 NRKQ7Z2Y5 1582 aa31.28■■■□□ 2.6
TMEM248-207ENST00000607045 QRICH2Q9H0J4 1663 aa31.28■■■□□ 2.6
TMEM248-207ENST00000607045 BRD4O60885 1362 aaPredicted RBP31.28■■■□□ 2.6
TMEM248-207ENST00000607045 PDE3BQ13370 1112 aa31.27■■■□□ 2.6
TMEM248-207ENST00000607045 EZH2Q15910 746 aaKnown RBP31.27■■■□□ 2.6
TMEM248-207ENST00000607045 CAMKK2Q96RR4 588 aa31.23■■■□□ 2.59
TMEM248-207ENST00000607045 APBA3O96018 575 aa31.22■■■□□ 2.59
TMEM248-207ENST00000607045 ZNF692Q9BU19 519 aaPredicted RBP31.22■■■□□ 2.59
TMEM248-207ENST00000607045 TRPM1Q7Z4N2 1603 aa31.22■■■□□ 2.59
TMEM248-207ENST00000607045 AXIN2Q9Y2T1 843 aa31.21■■■□□ 2.59
TMEM248-207ENST00000607045 THRAP3Q9Y2W1 955 aaKnown RBP31.21■■■□□ 2.59
TMEM248-207ENST00000607045 TTC21BQ7Z4L5 1316 aa31.21■■■□□ 2.59
TMEM248-207ENST00000607045 LMO7Q8WWI1 1683 aa31.2■■■□□ 2.59
TMEM248-207ENST00000607045 R3HDM1Q15032 1099 aaKnown RBP31.19■■■□□ 2.58
TMEM248-207ENST00000607045 AATKQ6ZMQ8 1374 aa31.18■■■□□ 2.58
TMEM248-207ENST00000607045 COL5A2P05997 1499 aaPredicted RBP31.18■■■□□ 2.58
TMEM248-207ENST00000607045 DISP2A7MBM2 1401 aa31.17■■■□□ 2.58
TMEM248-207ENST00000607045 SOX12O15370 315 aa31.16■■■□□ 2.58
TMEM248-207ENST00000607045 RGPD1P0DJD0 1748 aa31.15■■■□□ 2.58
TMEM248-207ENST00000607045 ARHGEF25Q86VW2 580 aa31.14■■■□□ 2.58
TMEM248-207ENST00000607045 TOM1L2Q6ZVM7 507 aa31.13■■■□□ 2.57
TMEM248-207ENST00000607045 CARD11Q9BXL7 1154 aa31.13■■■□□ 2.57
TMEM248-207ENST00000607045 SLIT3O75094 1523 aa31.13■■■□□ 2.57
TMEM248-207ENST00000607045 CRB1P82279 1406 aa31.12■■■□□ 2.57
TMEM248-207ENST00000607045 TNS1Q9HBL0 1735 aaKnown RBP31.1■■■□□ 2.57
TMEM248-207ENST00000607045 CPSF1Q10570 1443 aaKnown RBP31.09■■■□□ 2.57
TMEM248-207ENST00000607045 KCNH5Q8NCM2 988 aa31.09■■■□□ 2.57
TMEM248-207ENST00000607045 PIK3C2AO00443 1686 aa31.09■■■□□ 2.57
TMEM248-207ENST00000607045 KTN1Q86UP2 1357 aaKnown RBP31.08■■■□□ 2.57
TMEM248-207ENST00000607045 TTC21AQ8NDW8 1320 aa31.08■■■□□ 2.57
TMEM248-207ENST00000607045 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.07■■■□□ 2.56
TMEM248-207ENST00000607045 WDR17Q8IZU2 1322 aa31.06■■■□□ 2.56
TMEM248-207ENST00000607045 DDB1Q16531 1140 aa31.05■■■□□ 2.56
TMEM248-207ENST00000607045 TMC1Q8TDI8 760 aa31.04■■■□□ 2.56
TMEM248-207ENST00000607045 SLC12A5Q9H2X9 1139 aa31.04■■■□□ 2.56
TMEM248-207ENST00000607045 COL18A1P39060 1754 aa31.03■■■□□ 2.56
TMEM248-207ENST00000607045 CSB-PGBD3P0DP91 1061 aa31.01■■■□□ 2.55
TMEM248-207ENST00000607045 PTF1AQ7RTS3 328 aa31.01■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms