RNA–Protein interactions for RNA: ENST00000602498.1

HCG18-243, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 327 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-243ENST00000602498 CARD11Q9BXL7 1154 aa8.09□□□□□ -1.11
HCG18-243ENST00000602498 USP35Q9P2H5 1018 aa8.09□□□□□ -1.11
HCG18-243ENST00000602498 TONSLQ96HA7 1378 aa8.09□□□□□ -1.12
HCG18-243ENST00000602498 TULP4Q9NRJ4 1543 aa8.08□□□□□ -1.12
HCG18-243ENST00000602498 ATP7BP35670 1465 aa8.08□□□□□ -1.12
HCG18-243ENST00000602498 VPS72Q15906 364 aa8.08□□□□□ -1.12
HCG18-243ENST00000602498 KIAA0232Q92628 1395 aa8.08□□□□□ -1.12
HCG18-243ENST00000602498 RALGAPBQ86X10 1494 aa8.07□□□□□ -1.12
HCG18-243ENST00000602498 KNDC1Q76NI1 1749 aa8.07□□□□□ -1.12
HCG18-243ENST00000602498 FMN2Q9NZ56 1722 aa8.07□□□□□ -1.12
HCG18-243ENST00000602498 PPIP5K1Q6PFW1 1433 aa8.07□□□□□ -1.12
HCG18-243ENST00000602498 PLEKHG3A1L390 1219 aa8.07□□□□□ -1.12
HCG18-243ENST00000602498 TMC1Q8TDI8 760 aa8.07□□□□□ -1.12
HCG18-243ENST00000602498 EVC2Q86UK5 1308 aa8.06□□□□□ -1.12
HCG18-243ENST00000602498 NLRP6P59044 892 aa8.06□□□□□ -1.12
HCG18-243ENST00000602498 ZRANB1Q9UGI0 708 aa8.06□□□□□ -1.12
HCG18-243ENST00000602498 SLIT2O94813 1529 aa8.06□□□□□ -1.12
HCG18-243ENST00000602498 LAMC1P11047 1609 aa8.06□□□□□ -1.12
HCG18-243ENST00000602498 ATAD2Q6PL18 1390 aa8.06□□□□□ -1.12
HCG18-243ENST00000602498 USP32Q8NFA0 1604 aa8.05□□□□□ -1.12
HCG18-243ENST00000602498 EVA1CP58658 441 aa8.05□□□□□ -1.12
HCG18-243ENST00000602498 DEFB132Q7Z7B7 95 aa8.05□□□□□ -1.12
HCG18-243ENST00000602498 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.05□□□□□ -1.121e-6■■■■□ 21.3
HCG18-243ENST00000602498 CDK12Q9NYV4 1490 aaPredicted RBP8.05□□□□□ -1.12
HCG18-243ENST00000602498 GCP02774 474 aa8.04□□□□□ -1.12
HCG18-243ENST00000602498 LARP1Q6PKG0 1096 aaKnown RBP8.04□□□□□ -1.12
HCG18-243ENST00000602498 KRT27Q7Z3Y8 459 aa8.04□□□□□ -1.12
HCG18-243ENST00000602498 POLR3AO14802 1390 aaPredicted RBP8.04□□□□□ -1.12
HCG18-243ENST00000602498 ADGRB2O60241 1585 aa8.04□□□□□ -1.12
HCG18-243ENST00000602498 NLRP13Q86W25 1043 aa8.03□□□□□ -1.12
HCG18-243ENST00000602498 SLC12A5Q9H2X9 1139 aa8.03□□□□□ -1.12
HCG18-243ENST00000602498 COL22A1Q8NFW1 1626 aaPredicted RBP8.03□□□□□ -1.12
HCG18-243ENST00000602498 SPATA31A5Q5VU36 1347 aa8.03□□□□□ -1.12
HCG18-243ENST00000602498 SPATA31A7Q8IWB4 1347 aa8.03□□□□□ -1.12
HCG18-243ENST00000602498 KIF1AQ12756 1690 aa8.02□□□□□ -1.13
HCG18-243ENST00000602498 ST20-MTHFSA0A0A6YYL1 179 aa8.02□□□□□ -1.13
HCG18-243ENST00000602498 TTC21BQ7Z4L5 1316 aa8.02□□□□□ -1.13
HCG18-243ENST00000602498 SF3B2Q13435 895 aaKnown RBP8.01□□□□□ -1.13
HCG18-243ENST00000602498 NME9Q86XW9 330 aa8.01□□□□□ -1.13
HCG18-243ENST00000602498 USP6P35125 1406 aa8.01□□□□□ -1.13
HCG18-243ENST00000602498 USP19O94966 1318 aa8.01□□□□□ -1.13
HCG18-243ENST00000602498 ONECUT3O60422 494 aaPredicted RBP8□□□□□ -1.13
HCG18-243ENST00000602498 POLR3GLQ9BT43 218 aa8□□□□□ -1.13
HCG18-243ENST00000602498 AXIN2Q9Y2T1 843 aa8□□□□□ -1.13
HCG18-243ENST00000602498 GLI3P10071 1580 aa8□□□□□ -1.13
HCG18-243ENST00000602498 ARHGEF28Q8N1W1 1705 aaKnown RBP8□□□□□ -1.13
HCG18-243ENST00000602498 SPATA31A1Q5TZJ5 1347 aa8□□□□□ -1.13
HCG18-243ENST00000602498 KTN1Q86UP2 1357 aaKnown RBP7.99□□□□□ -1.13
HCG18-243ENST00000602498 CSB-PGBD3P0DP91 1061 aa7.99□□□□□ -1.13
HCG18-243ENST00000602498 FBLN1P23142 703 aa7.99□□□□□ -1.13
HCG18-243ENST00000602498 TOM1L2Q6ZVM7 507 aa7.99□□□□□ -1.13
HCG18-243ENST00000602498 CCER1Q8TC90 406 aaPredicted RBP7.99□□□□□ -1.13
HCG18-243ENST00000602498 TESK2Q96S53 571 aa7.99□□□□□ -1.13
HCG18-243ENST00000602498 SSH2Q76I76 1423 aa7.98□□□□□ -1.13
HCG18-243ENST00000602498 PSDA5PKW4 1024 aaPredicted RBP7.98□□□□□ -1.13
HCG18-243ENST00000602498 TRIM37O94972 964 aa7.98□□□□□ -1.13
HCG18-243ENST00000602498 EN1Q05925 392 aaPredicted RBP7.98□□□□□ -1.13
HCG18-243ENST00000602498 PPP4R3CPQ6ZMV5 832 aa7.98□□□□□ -1.13
HCG18-243ENST00000602498 HDGFL2Q7Z4V5 671 aaPredicted RBP7.98□□□□□ -1.13
HCG18-243ENST00000602498 TCP11L2Q8N4U5 519 aa7.98□□□□□ -1.13
HCG18-243ENST00000602498 ZNF692Q9BU19 519 aaPredicted RBP7.98□□□□□ -1.13
HCG18-243ENST00000602498 RGPD8O14715 1765 aaPredicted RBP7.97□□□□□ -1.13
HCG18-243ENST00000602498 PDE3BQ13370 1112 aa7.97□□□□□ -1.13
HCG18-243ENST00000602498 LTV1Q96GA3 475 aaPredicted RBP7.97□□□□□ -1.13
HCG18-243ENST00000602498 TRPM1Q7Z4N2 1603 aa7.96□□□□□ -1.13
HCG18-243ENST00000602498 BLMP54132 1417 aaPredicted RBP7.96□□□□□ -1.13
HCG18-243ENST00000602498 TRPM3Q9HCF6 1732 aaPredicted RBP7.96□□□□□ -1.14
HCG18-243ENST00000602498 EZH2Q15910 746 aaKnown RBP7.96□□□□□ -1.14
HCG18-243ENST00000602498 ARHGEF25Q86VW2 580 aa7.96□□□□□ -1.14
HCG18-243ENST00000602498 CCDC125Q86Z20 511 aa7.96□□□□□ -1.14
HCG18-243ENST00000602498 A0A1W2PP64 1363 aa7.96□□□□□ -1.14
HCG18-243ENST00000602498 CPDO75976 1380 aa7.96□□□□□ -1.14
HCG18-243ENST00000602498 USP47Q96K76 1375 aa7.96□□□□□ -1.14
HCG18-243ENST00000602498 CAMTA1Q9Y6Y1 1673 aa7.95□□□□□ -1.14
HCG18-243ENST00000602498 APBA3O96018 575 aa7.95□□□□□ -1.14
HCG18-243ENST00000602498 BAG6P46379 1132 aa7.95□□□□□ -1.14
HCG18-243ENST00000602498 KCNH5Q8NCM2 988 aa7.95□□□□□ -1.14
HCG18-243ENST00000602498 NLRP2Q9NX02 1062 aa7.95□□□□□ -1.14
HCG18-243ENST00000602498 TERF2IPQ9NYB0 399 aa7.95□□□□□ -1.14
HCG18-243ENST00000602498 TTC21AQ8NDW8 1320 aa7.95□□□□□ -1.14
HCG18-243ENST00000602498 SBNO2Q9Y2G9 1366 aa7.95□□□□□ -1.14
HCG18-243ENST00000602498 CPSF1Q10570 1443 aaKnown RBP7.95□□□□□ -1.14
HCG18-243ENST00000602498 TMF1P82094 1093 aa7.94□□□□□ -1.14
HCG18-243ENST00000602498 BARGINQ6ZT62 677 aa7.94□□□□□ -1.14
HCG18-243ENST00000602498 PTF1AQ7RTS3 328 aa7.94□□□□□ -1.14
HCG18-243ENST00000602498 GGNBP2Q9H3C7 697 aa7.94□□□□□ -1.14
HCG18-243ENST00000602498 KIAA1210Q9ULL0 1709 aa7.94□□□□□ -1.14
HCG18-243ENST00000602498 AATKQ6ZMQ8 1374 aa7.94□□□□□ -1.14
HCG18-243ENST00000602498 COL5A2P05997 1499 aaPredicted RBP7.94□□□□□ -1.14
HCG18-243ENST00000602498 CD163L1Q9NR16 1453 aa7.94□□□□□ -1.14
HCG18-243ENST00000602498 ALS2Q96Q42 1657 aa7.93□□□□□ -1.14
HCG18-243ENST00000602498 QRICH2Q9H0J4 1663 aa7.93□□□□□ -1.14
HCG18-243ENST00000602498 R3HDM1Q15032 1099 aaKnown RBP7.93□□□□□ -1.14
HCG18-243ENST00000602498 RRS1Q15050 365 aaKnown RBP7.93□□□□□ -1.14
HCG18-243ENST00000602498 DDB1Q16531 1140 aa7.93□□□□□ -1.14
HCG18-243ENST00000602498 FAM196AQ6ZSG2 479 aa7.93□□□□□ -1.14
HCG18-243ENST00000602498 ANKRD24Q8TF21 1146 aa7.93□□□□□ -1.14
HCG18-243ENST00000602498 BRD4O60885 1362 aaPredicted RBP7.93□□□□□ -1.14
HCG18-243ENST00000602498 NRKQ7Z2Y5 1582 aa7.93□□□□□ -1.14
HCG18-243ENST00000602498 MAPK8IP2Q13387 824 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms