RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.21■■□□□ 1.63
SSBP4-212ENST00000601919 TTC21BQ7Z4L5 1316 aa25.2■■□□□ 1.62
SSBP4-212ENST00000601919 MYBBP1AQ9BQG0 1328 aaKnown RBP25.19■■□□□ 1.62
SSBP4-212ENST00000601919 FYB1O15117 783 aa25.19■■□□□ 1.62
SSBP4-212ENST00000601919 MORC1Q86VD1 984 aa25.19■■□□□ 1.62
SSBP4-212ENST00000601919 SSH2Q76I76 1423 aa25.19■■□□□ 1.62
SSBP4-212ENST00000601919 IQSEC2Q5JU85 1478 aa25.17■■□□□ 1.62
SSBP4-212ENST00000601919 FOXO3O43524 673 aa25.17■■□□□ 1.62
SSBP4-212ENST00000601919 NPHP3Q7Z494 1330 aa25.16■■□□□ 1.62
SSBP4-212ENST00000601919 GGNBP2Q9H3C7 697 aa25.15■■□□□ 1.62
SSBP4-212ENST00000601919 COG3Q96JB2 828 aa25.14■■□□□ 1.62
SSBP4-212ENST00000601919 BRINP3Q76B58 766 aa25.13■■□□□ 1.61
SSBP4-212ENST00000601919 NLRP13Q86W25 1043 aa25.13■■□□□ 1.61
SSBP4-212ENST00000601919 NME9Q86XW9 330 aa25.13■■□□□ 1.61
SSBP4-212ENST00000601919 PAK3O75914 559 aaPredicted RBP25.12■■□□□ 1.61
SSBP4-212ENST00000601919 KRT28Q7Z3Y7 464 aa25.12■■□□□ 1.61
SSBP4-212ENST00000601919 TOM1O60784 492 aa25.1■■□□□ 1.61
SSBP4-212ENST00000601919 SCAF1Q9H7N4 1312 aaKnown RBP25.1■■□□□ 1.61
SSBP4-212ENST00000601919 TRPM3Q9HCF6 1732 aaPredicted RBP25.09■■□□□ 1.61
SSBP4-212ENST00000601919 PPP2R1AP30153 589 aa25.09■■□□□ 1.61
SSBP4-212ENST00000601919 PIK3C2AO00443 1686 aa25.09■■□□□ 1.61
SSBP4-212ENST00000601919 USP31Q70CQ4 1352 aa25.08■■□□□ 1.61
SSBP4-212ENST00000601919 ABTB2Q8N961 1025 aa25.08■■□□□ 1.61
SSBP4-212ENST00000601919 USP54Q70EL1 1684 aa25.07■■□□□ 1.6
SSBP4-212ENST00000601919 SBNO1A3KN83 1393 aa25.07■■□□□ 1.6
SSBP4-212ENST00000601919 OVOS2A0A0J9YW53 1432 aa25.06■■□□□ 1.6
SSBP4-212ENST00000601919 OVOS2Q6IE36 1432 aa25.06■■□□□ 1.6
SSBP4-212ENST00000601919 MRS2Q9HD23 443 aa25.06■■□□□ 1.6
SSBP4-212ENST00000601919 NHSL1Q5SYE7 1610 aa25.05■■□□□ 1.6
SSBP4-212ENST00000601919 TNNT2P45379 298 aaPredicted RBP25.05■■□□□ 1.6
SSBP4-212ENST00000601919 NLRP6P59044 892 aa25.05■■□□□ 1.6
SSBP4-212ENST00000601919 XPCQ01831 940 aaPredicted RBP25.05■■□□□ 1.6
SSBP4-212ENST00000601919 ROBO1Q9Y6N7 1651 aa25.04■■□□□ 1.6
SSBP4-212ENST00000601919 PXDNQ92626 1479 aa25.04■■□□□ 1.6
SSBP4-212ENST00000601919 CERKQ8TCT0 537 aa25.04■■□□□ 1.6
SSBP4-212ENST00000601919 ALS2Q96Q42 1657 aa25.02■■□□□ 1.6
SSBP4-212ENST00000601919 ZRANB1Q9UGI0 708 aa25.02■■□□□ 1.6
SSBP4-212ENST00000601919 SOS2Q07890 1332 aaPredicted RBP25.01■■□□□ 1.59
SSBP4-212ENST00000601919 AATKQ6ZMQ8 1374 aa25.01■■□□□ 1.59
SSBP4-212ENST00000601919 UBAP1LF5GYI3 381 aa25■■□□□ 1.59
SSBP4-212ENST00000601919 ARHGEF10O15013 1369 aa25■■□□□ 1.59
SSBP4-212ENST00000601919 TNS3Q68CZ2 1445 aa25■■□□□ 1.59
SSBP4-212ENST00000601919 MAP2P11137 1827 aaKnown RBP24.99■■□□□ 1.59
SSBP4-212ENST00000601919 LMOD2Q6P5Q4 547 aa24.99■■□□□ 1.59
SSBP4-212ENST00000601919 DDX17Q92841 729 aaKnown RBP24.99■■□□□ 1.59
SSBP4-212ENST00000601919 CFAP53Q96M91 514 aa24.99■■□□□ 1.59
SSBP4-212ENST00000601919 MARF1Q9Y4F3 1742 aaKnown RBP24.98■■□□□ 1.59
SSBP4-212ENST00000601919 AHDC1Q5TGY3 1603 aaPredicted RBP24.97■■□□□ 1.59
SSBP4-212ENST00000601919 SPATA31A3Q5VYP0 1347 aa24.97■■□□□ 1.59
SSBP4-212ENST00000601919 MTHFSP49914 203 aa24.96■■□□□ 1.59
SSBP4-212ENST00000601919 NUTM2GQ5VZR2 741 aa24.96■■□□□ 1.59
SSBP4-212ENST00000601919 KCNH5Q8NCM2 988 aa24.96■■□□□ 1.59
SSBP4-212ENST00000601919 CCDC184Q52MB2 194 aa24.95■■□□□ 1.58
SSBP4-212ENST00000601919 PIP4K2BP78356 416 aa24.92■■□□□ 1.58
SSBP4-212ENST00000601919 POLKQ9UBT6 870 aa24.92■■□□□ 1.58
SSBP4-212ENST00000601919 SMG6Q86US8 1419 aaKnown RBP24.92■■□□□ 1.58
SSBP4-212ENST00000601919 USP19O94966 1318 aa24.91■■□□□ 1.58
SSBP4-212ENST00000601919 SLIT3O75094 1523 aa24.91■■□□□ 1.58
SSBP4-212ENST00000601919 LRRC59Q96AG4 307 aaKnown RBP24.9■■□□□ 1.58
SSBP4-212ENST00000601919 PHLPP1O60346 1717 aa24.89■■□□□ 1.58
SSBP4-212ENST00000601919 MED1Q15648 1581 aaPredicted RBP24.89■■□□□ 1.58
SSBP4-212ENST00000601919 PNISRQ8TF01 805 aaKnown RBP24.89■■□□□ 1.58
SSBP4-212ENST00000601919 CDK12Q9NYV4 1490 aaPredicted RBP24.89■■□□□ 1.57
SSBP4-212ENST00000601919 PPM1GO15355 546 aaPredicted RBP24.88■■□□□ 1.57
SSBP4-212ENST00000601919 SOX12O15370 315 aa24.88■■□□□ 1.57
SSBP4-212ENST00000601919 INSRP06213 1382 aa24.88■■□□□ 1.57
SSBP4-212ENST00000601919 KIF24Q5T7B8 1368 aa24.88■■□□□ 1.57
SSBP4-212ENST00000601919 RRS1Q15050 365 aaKnown RBP24.87■■□□□ 1.57
SSBP4-212ENST00000601919 NFAT5O94916 1531 aa24.86■■□□□ 1.57
SSBP4-212ENST00000601919 PNPLA6Q8IY17 1366 aa24.86■■□□□ 1.57
SSBP4-212ENST00000601919 GCP02774 474 aa24.86■■□□□ 1.57
SSBP4-212ENST00000601919 WDR43Q15061 677 aaKnown RBP eCLIP24.86■■□□□ 1.57
SSBP4-212ENST00000601919 FAM9BQ8IZU0 186 aa24.86■■□□□ 1.57
SSBP4-212ENST00000601919 EMILIN1Q9Y6C2 1016 aa24.86■■□□□ 1.57
SSBP4-212ENST00000601919 LTN1O94822 1766 aa24.85■■□□□ 1.57
SSBP4-212ENST00000601919 FBLN1P23142 703 aa24.85■■□□□ 1.57
SSBP4-212ENST00000601919 PHRF1Q9P1Y6 1649 aaKnown RBP24.85■■□□□ 1.57
SSBP4-212ENST00000601919 NUDCQ9Y266 331 aa24.84■■□□□ 1.57
SSBP4-212ENST00000601919 MAP3K19Q56UN5 1328 aa24.84■■□□□ 1.57
SSBP4-212ENST00000601919 FLT4P35916 1363 aa24.83■■□□□ 1.57
SSBP4-212ENST00000601919 AMPHP49418 695 aa24.83■■□□□ 1.57
SSBP4-212ENST00000601919 CRYBG1Q9Y4K1 1723 aa24.83■■□□□ 1.57
SSBP4-212ENST00000601919 RTL1A6NKG5 1358 aa24.82■■□□□ 1.56
SSBP4-212ENST00000601919 COL16A1Q07092 1604 aaPredicted RBP24.82■■□□□ 1.56
SSBP4-212ENST00000601919 DIAPH1O60610 1272 aaKnown RBP24.81■■□□□ 1.56
SSBP4-212ENST00000601919 COL3A1P02461 1466 aaPredicted RBP24.81■■□□□ 1.56
SSBP4-212ENST00000601919 PEAK1Q9H792 1746 aa24.8■■□□□ 1.56
SSBP4-212ENST00000601919 SHPRHQ149N8 1683 aa24.79■■□□□ 1.56
SSBP4-212ENST00000601919 PLEKHG5O94827 1062 aa24.79■■□□□ 1.56
SSBP4-212ENST00000601919 HAP1P54257 671 aaPredicted RBP24.79■■□□□ 1.56
SSBP4-212ENST00000601919 COL22A1Q8NFW1 1626 aaPredicted RBP24.78■■□□□ 1.56
SSBP4-212ENST00000601919 ARHGEF25Q86VW2 580 aa24.77■■□□□ 1.56
SSBP4-212ENST00000601919 ABCA3Q99758 1704 aa24.77■■□□□ 1.56
SSBP4-212ENST00000601919 IP6K1Q92551 441 aa24.76■■□□□ 1.55
SSBP4-212ENST00000601919 HOXC9P31274 260 aa24.75■■□□□ 1.55
SSBP4-212ENST00000601919 CABLES1Q8TDN4 633 aa24.75■■□□□ 1.55
SSBP4-212ENST00000601919 ABCC6O95255 1503 aa24.75■■□□□ 1.55
SSBP4-212ENST00000601919 ADAMTS8Q9UP79 889 aa24.74■■□□□ 1.55
SSBP4-212ENST00000601919 CPDO75976 1380 aa24.74■■□□□ 1.55
SSBP4-212ENST00000601919 ZBTB7CA1YPR0 619 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms