RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 TTC21BQ7Z4L5 1316 aa31.42■■■□□ 2.62
IRF3-227ENST00000600911 ANKRD26Q9UPS8 1709 aa31.42■■■□□ 2.62
IRF3-227ENST00000600911 MARF1Q9Y4F3 1742 aaKnown RBP31.42■■■□□ 2.62
IRF3-227ENST00000600911 NME9Q86XW9 330 aa31.41■■■□□ 2.62
IRF3-227ENST00000600911 PXDNQ92626 1479 aa31.4■■■□□ 2.62
IRF3-227ENST00000600911 FYB1O15117 783 aa31.4■■■□□ 2.62
IRF3-227ENST00000600911 MIER1Q8N108 512 aa31.38■■■□□ 2.61
IRF3-227ENST00000600911 GGNBP2Q9H3C7 697 aa31.38■■■□□ 2.61
IRF3-227ENST00000600911 PSME1Q06323 249 aa31.37■■■□□ 2.61
IRF3-227ENST00000600911 PRKRIP1Q9H875 184 aaPredicted RBP31.37■■■□□ 2.61
IRF3-227ENST00000600911 CGNL1Q0VF96 1302 aa31.36■■■□□ 2.61
IRF3-227ENST00000600911 KRT28Q7Z3Y7 464 aa31.36■■■□□ 2.61
IRF3-227ENST00000600911 NPC1L1Q9UHC9 1359 aa31.36■■■□□ 2.61
IRF3-227ENST00000600911 ALS2Q96Q42 1657 aa31.36■■■□□ 2.61
IRF3-227ENST00000600911 UBAP1LF5GYI3 381 aa31.35■■■□□ 2.61
IRF3-227ENST00000600911 PARD3Q8TEW0 1356 aa31.34■■■□□ 2.61
IRF3-227ENST00000600911 PIP4K2BP78356 416 aa31.32■■■□□ 2.6
IRF3-227ENST00000600911 NPHP3Q7Z494 1330 aa31.32■■■□□ 2.6
IRF3-227ENST00000600911 ANP32CO43423 234 aa31.31■■■□□ 2.6
IRF3-227ENST00000600911 TOM1O60784 492 aa31.31■■■□□ 2.6
IRF3-227ENST00000600911 PAK3O75914 559 aaPredicted RBP31.31■■■□□ 2.6
IRF3-227ENST00000600911 USP54Q70EL1 1684 aa31.3■■■□□ 2.6
IRF3-227ENST00000600911 AHDC1Q5TGY3 1603 aaPredicted RBP31.3■■■□□ 2.6
IRF3-227ENST00000600911 OVOS2A0A0J9YW53 1432 aa31.3■■■□□ 2.6
IRF3-227ENST00000600911 OVOS2Q6IE36 1432 aa31.3■■■□□ 2.6
IRF3-227ENST00000600911 NUTM2GQ5VZR2 741 aa31.29■■■□□ 2.6
IRF3-227ENST00000600911 TTC21AQ8NDW8 1320 aa31.29■■■□□ 2.6
IRF3-227ENST00000600911 SOS2Q07890 1332 aaPredicted RBP31.28■■■□□ 2.6
IRF3-227ENST00000600911 NSD2O96028 1365 aa31.28■■■□□ 2.6
IRF3-227ENST00000600911 FBLN1P23142 703 aa31.26■■■□□ 2.59
IRF3-227ENST00000600911 BRD4O60885 1362 aaPredicted RBP31.26■■■□□ 2.59
IRF3-227ENST00000600911 PHLPP1O60346 1717 aa31.25■■■□□ 2.59
IRF3-227ENST00000600911 SCAF1Q9H7N4 1312 aaKnown RBP31.24■■■□□ 2.59
IRF3-227ENST00000600911 TNNT2P45379 298 aaPredicted RBP31.24■■■□□ 2.59
IRF3-227ENST00000600911 SBNO1A3KN83 1393 aa31.23■■■□□ 2.59
IRF3-227ENST00000600911 ABTB2Q8N961 1025 aa31.23■■■□□ 2.59
IRF3-227ENST00000600911 USP31Q70CQ4 1352 aa31.23■■■□□ 2.59
IRF3-227ENST00000600911 TNS3Q68CZ2 1445 aa31.23■■■□□ 2.59
IRF3-227ENST00000600911 COL16A1Q07092 1604 aaPredicted RBP31.22■■■□□ 2.59
IRF3-227ENST00000600911 CCDC184Q52MB2 194 aa31.22■■■□□ 2.59
IRF3-227ENST00000600911 MORC1Q86VD1 984 aa31.22■■■□□ 2.59
IRF3-227ENST00000600911 CRYBG1Q9Y4K1 1723 aa31.22■■■□□ 2.59
IRF3-227ENST00000600911 SPATA31A3Q5VYP0 1347 aa31.21■■■□□ 2.59
IRF3-227ENST00000600911 MED1Q15648 1581 aaPredicted RBP31.21■■■□□ 2.59
IRF3-227ENST00000600911 RALBP1Q15311 655 aa31.2■■■□□ 2.58
IRF3-227ENST00000600911 MAP2P11137 1827 aaKnown RBP31.19■■■□□ 2.58
IRF3-227ENST00000600911 NLRP6P59044 892 aa31.19■■■□□ 2.58
IRF3-227ENST00000600911 LMOD2Q6P5Q4 547 aa31.18■■■□□ 2.58
IRF3-227ENST00000600911 COG3Q96JB2 828 aa31.18■■■□□ 2.58
IRF3-227ENST00000600911 PLEKHG5O94827 1062 aa31.16■■■□□ 2.58
IRF3-227ENST00000600911 PPP2R1AP30153 589 aa31.16■■■□□ 2.58
IRF3-227ENST00000600911 PHRF1Q9P1Y6 1649 aaKnown RBP31.16■■■□□ 2.58
IRF3-227ENST00000600911 MYBBP1AQ9BQG0 1328 aaKnown RBP31.15■■■□□ 2.58
IRF3-227ENST00000600911 SLIT3O75094 1523 aa31.14■■■□□ 2.58
IRF3-227ENST00000600911 ABCA3Q99758 1704 aa31.14■■■□□ 2.58
IRF3-227ENST00000600911 SOX12O15370 315 aa31.13■■■□□ 2.57
IRF3-227ENST00000600911 NFAT5O94916 1531 aa31.12■■■□□ 2.57
IRF3-227ENST00000600911 PEAK1Q9H792 1746 aa31.11■■■□□ 2.57
IRF3-227ENST00000600911 USP19O94966 1318 aa31.11■■■□□ 2.57
IRF3-227ENST00000600911 CABLES1Q8TDN4 633 aa31.1■■■□□ 2.57
IRF3-227ENST00000600911 LTN1O94822 1766 aa31.08■■■□□ 2.57
IRF3-227ENST00000600911 RRS1Q15050 365 aaKnown RBP31.08■■■□□ 2.57
IRF3-227ENST00000600911 NLRP13Q86W25 1043 aa31.08■■■□□ 2.57
IRF3-227ENST00000600911 ARHGEF10O15013 1369 aa31.07■■■□□ 2.56
IRF3-227ENST00000600911 EMILIN1Q9Y6C2 1016 aa31.06■■■□□ 2.56
IRF3-227ENST00000600911 POLKQ9UBT6 870 aa31.06■■■□□ 2.56
IRF3-227ENST00000600911 AATKQ6ZMQ8 1374 aa31.05■■■□□ 2.56
IRF3-227ENST00000600911 COL22A1Q8NFW1 1626 aaPredicted RBP31.05■■■□□ 2.56
IRF3-227ENST00000600911 PNPLA6Q8IY17 1366 aa31.04■■■□□ 2.56
IRF3-227ENST00000600911 MTHFSP49914 203 aa31.03■■■□□ 2.56
IRF3-227ENST00000600911 LRRC59Q96AG4 307 aaKnown RBP31.02■■■□□ 2.56
IRF3-227ENST00000600911 SMG6Q86US8 1419 aaKnown RBP31.02■■■□□ 2.56
IRF3-227ENST00000600911 GCP02774 474 aa31.01■■■□□ 2.55
IRF3-227ENST00000600911 MAP3K19Q56UN5 1328 aa31■■■□□ 2.55
IRF3-227ENST00000600911 CCER2I3L3R5 266 aa31■■■□□ 2.55
IRF3-227ENST00000600911 COL3A1P02461 1466 aaPredicted RBP30.99■■■□□ 2.55
IRF3-227ENST00000600911 HSPA1LP34931 641 aa30.98■■■□□ 2.55
IRF3-227ENST00000600911 SHPRHQ149N8 1683 aa30.98■■■□□ 2.55
IRF3-227ENST00000600911 MRS2Q9HD23 443 aa30.97■■■□□ 2.55
IRF3-227ENST00000600911 RGPD5Q99666 1765 aa30.96■■■□□ 2.55
IRF3-227ENST00000600911 PPM1GO15355 546 aaPredicted RBP30.95■■■□□ 2.54
IRF3-227ENST00000600911 COL18A1P39060 1754 aa30.94■■■□□ 2.54
IRF3-227ENST00000600911 ZC3H6P61129 1189 aaKnown RBP30.94■■■□□ 2.54
IRF3-227ENST00000600911 KCNH5Q8NCM2 988 aa30.93■■■□□ 2.54
IRF3-227ENST00000600911 CDK12Q9NYV4 1490 aaPredicted RBP30.93■■■□□ 2.54
IRF3-227ENST00000600911 ARHGEF25Q86VW2 580 aa30.91■■■□□ 2.54
IRF3-227ENST00000600911 ZBTB7CA1YPR0 619 aa30.91■■■□□ 2.54
IRF3-227ENST00000600911 KIAA0232Q92628 1395 aa30.88■■■□□ 2.53
IRF3-227ENST00000600911 HSP90AB2PQ58FF8 381 aa30.88■■■□□ 2.53
IRF3-227ENST00000600911 HOXC9P31274 260 aa30.86■■■□□ 2.53
IRF3-227ENST00000600911 INSRP06213 1382 aa30.86■■■□□ 2.53
IRF3-227ENST00000600911 CHRNA2Q15822 529 aa30.85■■■□□ 2.53
IRF3-227ENST00000600911 FLT4P35916 1363 aa30.85■■■□□ 2.53
IRF3-227ENST00000600911 PNISRQ8TF01 805 aaKnown RBP30.84■■■□□ 2.53
IRF3-227ENST00000600911 AXIN2Q9Y2T1 843 aa30.84■■■□□ 2.53
IRF3-227ENST00000600911 JCADQ9P266 1359 aa30.84■■■□□ 2.53
IRF3-227ENST00000600911 LMO7Q8WWI1 1683 aa30.84■■■□□ 2.53
IRF3-227ENST00000600911 AMPHP49418 695 aa30.84■■■□□ 2.53
IRF3-227ENST00000600911 RGPD2P0DJD1 1756 aa30.83■■■□□ 2.53
IRF3-227ENST00000600911 CPDO75976 1380 aa30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms