RNA–Protein interactions for RNA: ENST00000599953.1

ZNF544-215, Transcript of zinc finger protein 544, humanhuman

TSL 5 BASIC

Gene ZNF544, Length 2,274 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-215ENST00000599953 TMPOP42166 694 aaKnown RBP13.8□□□□□ -0.2
ZNF544-215ENST00000599953 NLRP1Q9C000 1473 aa13.8□□□□□ -0.2
ZNF544-215ENST00000599953 ARHGEF40Q8TER5 1519 aa13.79□□□□□ -0.2
ZNF544-215ENST00000599953 FTSJ3Q8IY81 847 aaKnown RBP13.79□□□□□ -0.2
ZNF544-215ENST00000599953 CDK19Q9BWU1 502 aa13.79□□□□□ -0.2
ZNF544-215ENST00000599953 DIAPH1O60610 1272 aaKnown RBP13.79□□□□□ -0.2
ZNF544-215ENST00000599953 MVPQ14764 893 aaKnown RBP13.79□□□□□ -0.2
ZNF544-215ENST00000599953 FBXO31Q5XUX0 539 aaPredicted RBP13.79□□□□□ -0.2
ZNF544-215ENST00000599953 BCL2L13Q9BXK5 485 aa13.79□□□□□ -0.2
ZNF544-215ENST00000599953 KIF20BQ96Q89 1820 aa13.78□□□□□ -0.2
ZNF544-215ENST00000599953 PNPLA6Q8IY17 1366 aa13.78□□□□□ -0.2
ZNF544-215ENST00000599953 RLBP1P12271 317 aa13.78□□□□□ -0.2
ZNF544-215ENST00000599953 FAM69CQ0P6D2 419 aa13.78□□□□□ -0.2
ZNF544-215ENST00000599953 DZIP1LQ8IYY4 767 aaKnown RBP13.78□□□□□ -0.2
ZNF544-215ENST00000599953 ATP7BP35670 1465 aa13.77□□□□□ -0.2
ZNF544-215ENST00000599953 DIP2BQ9P265 1576 aa13.76□□□□□ -0.21
ZNF544-215ENST00000599953 CYB5RLQ6IPT4 315 aa13.76□□□□□ -0.21
ZNF544-215ENST00000599953 SENP3Q9H4L4 574 aaPredicted RBP13.76□□□□□ -0.21
ZNF544-215ENST00000599953 SMC4Q9NTJ3 1288 aa13.76□□□□□ -0.21
ZNF544-215ENST00000599953 SPATA31D1Q6ZQQ2 1576 aa13.76□□□□□ -0.21
ZNF544-215ENST00000599953 CABP1Q9NZU7 370 aa13.76□□□□□ -0.21
ZNF544-215ENST00000599953 TRIM35Q9UPQ4 493 aa13.76□□□□□ -0.21
ZNF544-215ENST00000599953 PCDHB15Q9Y5E8 787 aa13.76□□□□□ -0.21
ZNF544-215ENST00000599953 A2ML1A8K2U0 1454 aa13.75□□□□□ -0.21
ZNF544-215ENST00000599953 UPF2Q9HAU5 1272 aaKnown RBP13.75□□□□□ -0.21
ZNF544-215ENST00000599953 CDC42BPGQ6DT37 1551 aa13.75□□□□□ -0.21
ZNF544-215ENST00000599953 FCHSD2O94868 740 aa13.75□□□□□ -0.21
ZNF544-215ENST00000599953 RIPK4P57078 832 aa13.75□□□□□ -0.21
ZNF544-215ENST00000599953 EXOSC9Q06265 439 aaKnown RBP13.75□□□□□ -0.21
ZNF544-215ENST00000599953 TSR2Q969E8 191 aaKnown RBP13.75□□□□□ -0.21
ZNF544-215ENST00000599953 RIMS2Q9UQ26 1411 aa13.74□□□□□ -0.21
ZNF544-215ENST00000599953 DDX19BQ9UMR2 479 aa13.74□□□□□ -0.21
ZNF544-215ENST00000599953 TNNQ9UQP3 1299 aa13.74□□□□□ -0.21
ZNF544-215ENST00000599953 KIF16BQ96L93 1317 aa13.74□□□□□ -0.21
ZNF544-215ENST00000599953 SLC4A3P48751 1232 aa13.73□□□□□ -0.21
ZNF544-215ENST00000599953 BECN1Q14457 450 aa13.73□□□□□ -0.21
ZNF544-215ENST00000599953 PDZRN3Q9UPQ7 1066 aa13.73□□□□□ -0.21
ZNF544-215ENST00000599953 IPO8O15397 1037 aaKnown RBP13.73□□□□□ -0.21
ZNF544-215ENST00000599953 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.73□□□□□ -0.21
ZNF544-215ENST00000599953 ATF7IPQ6VMQ6 1270 aa13.72□□□□□ -0.21
ZNF544-215ENST00000599953 CALD1Q05682 793 aaKnown RBP13.71□□□□□ -0.21
ZNF544-215ENST00000599953 NFKBIBQ15653 356 aa13.71□□□□□ -0.21
ZNF544-215ENST00000599953 SSH1Q8WYL5 1049 aa13.71□□□□□ -0.21
ZNF544-215ENST00000599953 ZNF428Q96B54 188 aa13.71□□□□□ -0.21
ZNF544-215ENST00000599953 TRIM27P14373 513 aa13.71□□□□□ -0.21
ZNF544-215ENST00000599953 ALDH1L2Q3SY69 923 aa13.71□□□□□ -0.21
ZNF544-215ENST00000599953 SETD1AO15047 1707 aaKnown RBP13.71□□□□□ -0.22
ZNF544-215ENST00000599953 FAM135BQ49AJ0 1406 aa13.7□□□□□ -0.22
ZNF544-215ENST00000599953 EDC4Q6P2E9 1401 aaKnown RBP13.7□□□□□ -0.22
ZNF544-215ENST00000599953 USP19O94966 1318 aa13.7□□□□□ -0.22
ZNF544-215ENST00000599953 RIMBP3CA6NJZ7 1639 aa13.7□□□□□ -0.22
ZNF544-215ENST00000599953 RIMBP3BA6NNM3 1639 aa13.7□□□□□ -0.22
ZNF544-215ENST00000599953 RIMBP3Q9UFD9 1639 aa13.7□□□□□ -0.22
ZNF544-215ENST00000599953 HDGFP51858 240 aaKnown RBP13.7□□□□□ -0.22
ZNF544-215ENST00000599953 HDAC1Q13547 482 aaPredicted RBP13.7□□□□□ -0.22
ZNF544-215ENST00000599953 ITPRIPQ8IWB1 547 aa13.7□□□□□ -0.22
ZNF544-215ENST00000599953 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.7□□□□□ -0.22
ZNF544-215ENST00000599953 LRRC7Q96NW7 1537 aa13.7□□□□□ -0.22
ZNF544-215ENST00000599953 TSPOAP1O95153 1857 aa13.69□□□□□ -0.22
ZNF544-215ENST00000599953 WAPLQ7Z5K2 1190 aa13.69□□□□□ -0.22
ZNF544-215ENST00000599953 RSPH6AQ9H0K4 717 aa13.69□□□□□ -0.22
ZNF544-215ENST00000599953 POLKQ9UBT6 870 aa13.69□□□□□ -0.22
ZNF544-215ENST00000599953 NOB1Q9ULX3 412 aaKnown RBP13.69□□□□□ -0.22
ZNF544-215ENST00000599953 WASLO00401 505 aaPredicted RBP13.68□□□□□ -0.22
ZNF544-215ENST00000599953 PRKAR2BP31323 418 aa13.68□□□□□ -0.22
ZNF544-215ENST00000599953 ESF1Q9H501 851 aaKnown RBP13.68□□□□□ -0.22
ZNF544-215ENST00000599953 CHMP4BQ9H444 224 aaKnown RBP13.67□□□□□ -0.22
ZNF544-215ENST00000599953 CPSF1Q10570 1443 aaKnown RBP13.67□□□□□ -0.22
ZNF544-215ENST00000599953 PPIP5K1Q6PFW1 1433 aa13.67□□□□□ -0.22
ZNF544-215ENST00000599953 CDK12Q9NYV4 1490 aaPredicted RBP13.67□□□□□ -0.22
ZNF544-215ENST00000599953 SEC24BO95487 1268 aa13.66□□□□□ -0.22
ZNF544-215ENST00000599953 BRPF1P55201 1214 aaPredicted RBP13.66□□□□□ -0.22
ZNF544-215ENST00000599953 NFE2L2Q16236 605 aa13.66□□□□□ -0.22
ZNF544-215ENST00000599953 SIRT1Q96EB6 747 aa13.66□□□□□ -0.22
ZNF544-215ENST00000599953 AATKQ6ZMQ8 1374 aa13.66□□□□□ -0.22
ZNF544-215ENST00000599953 KNDC1Q76NI1 1749 aa13.65□□□□□ -0.22
ZNF544-215ENST00000599953 LMOD3Q0VAK6 560 aa13.65□□□□□ -0.22
ZNF544-215ENST00000599953 TBC1D32Q96NH3 1257 aa13.65□□□□□ -0.22
ZNF544-215ENST00000599953 MLECQ14165 292 aa13.65□□□□□ -0.22
ZNF544-215ENST00000599953 GSE1Q14687 1217 aa13.65□□□□□ -0.22
ZNF544-215ENST00000599953 TMEM57Q8N5G2 664 aa13.65□□□□□ -0.22
ZNF544-215ENST00000599953 NRXN3Q9Y4C0 1643 aa13.64□□□□□ -0.23
ZNF544-215ENST00000599953 MAP2P11137 1827 aaKnown RBP13.64□□□□□ -0.23
ZNF544-215ENST00000599953 COG3Q96JB2 828 aa13.64□□□□□ -0.23
ZNF544-215ENST00000599953 TECPR2O15040 1411 aa13.64□□□□□ -0.23
ZNF544-215ENST00000599953 GNAI1P63096 354 aa13.64□□□□□ -0.23
ZNF544-215ENST00000599953 SMC5Q8IY18 1101 aa13.64□□□□□ -0.23
ZNF544-215ENST00000599953 ZBTB40Q9NUA8 1239 aa13.64□□□□□ -0.23
ZNF544-215ENST00000599953 IFT57Q9NWB7 429 aa13.63□□□□□ -0.23
ZNF544-215ENST00000599953 CCDC61Q9Y6R9 512 aa13.63□□□□□ -0.23
ZNF544-215ENST00000599953 NUDT16Q96DE0 195 aaKnown RBP13.62□□□□□ -0.23
ZNF544-215ENST00000599953 METP08581 1390 aa13.62□□□□□ -0.23
ZNF544-215ENST00000599953 IL13P35225 146 aa13.62□□□□□ -0.23
ZNF544-215ENST00000599953 ARHGAP45Q92619 1136 aa13.62□□□□□ -0.23
ZNF544-215ENST00000599953 ZNF692Q9BU19 519 aaPredicted RBP13.62□□□□□ -0.23
ZNF544-215ENST00000599953 CPS1P31327 1500 aa13.62□□□□□ -0.23
ZNF544-215ENST00000599953 MON2Q7Z3U7 1717 aa13.62□□□□□ -0.23
ZNF544-215ENST00000599953 HMOX1P09601 288 aa13.61□□□□□ -0.23
ZNF544-215ENST00000599953 NME9Q86XW9 330 aa13.61□□□□□ -0.23
ZNF544-215ENST00000599953 EMILIN1Q9Y6C2 1016 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 2363.5 ms